RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	RRP43	P25359	394 aa	Predicted RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	HRR25	P29295	494 aa	Known RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	PUP2	P32379	260 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	HXT3	P32466	567 aa	Known RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	SEC66	P33754	206 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	YBR144C	P34215	104 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	SEF1	P34228	1148 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	VBA2	P38358	474 aa	Known RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	ECM10	P39987	644 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	ALG5	P40350	334 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	HXT14	P42833	540 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	CAK1	P43568	368 aa	Predicted RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	SUN4	P53616	420 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	EFM6	P53970	246 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	ARG7	Q04728	441 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	RTT109	Q07794	436 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	RPN5	Q12250	445 aa	Known RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	CTF3	Q12748	733 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	MF(ALPHA)1	P01149	165 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	REC107	P21651	314 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	BUD14	P27637	709 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	TFB1	P32776	642 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	HEL1	P36113	551 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	GMH1	P36125	273 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	CBR1	P38626	284 aa	Known RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	ELO1	P39540	310 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	DLD2	P46681	530 aa	Known RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	DPB11	P47027	764 aa	Predicted RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	VPS73	P53142	486 aa	Known RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	BOP3	P53958	396 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	SMX3	P54999	86 aa	Predicted RBP	2.89	□□□□□ -1.95
TFB1	YDR311W	HOT1	Q03213	719 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	YDR179W-A	Q03983	463 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	PLM2	Q04383	521 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	HRD3	Q05787	833 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	YDL073W	Q07454	984 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	AIM39	Q08223	395 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	CRT10	Q08226	957 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	PNS1	Q12412	539 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	HXK2	P04807	486 aa	Known RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	PRD1	P25375	712 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	PUP3	P25451	205 aa	Known RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	PMI40	P29952	429 aa	Known RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	MRPL9	P31334	269 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	RML2	P32611	393 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	SOF1	P33750	489 aa	Known RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	DEF1	P35732	738 aa	Known RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	ADE17	P38009	592 aa	Known RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	DIA4	P38705	446 aa	Predicted RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	GND1	P38720	489 aa	Known RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	PIH1	P38768	344 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	MIT1	P40002	666 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	NDC80	P40460	691 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	DIA3	P52290	468 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	COG2	P53271	262 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	SEC5	P89102	971 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	CTF4	Q01454	927 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	KAP120	Q02932	1032 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	YMR206W	Q03695	313 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	DPB4	Q04603	196 aa	Known RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	HEL2	Q05580	639 aa	Known RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	YOL073C	Q08232	322 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	BMS1	Q08965	1183 aa	Known RBP	2.88	□□□□□ -1.95
TFB1	YDR311W	REX3	Q12090	404 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	INP53	Q12271	1107 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	SKS1	Q12505	502 aa		2.88	□□□□□ -1.95
TFB1	YDR311W	STF1	P01098	86 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	WHI2	P12611	486 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	VMA2	P16140	517 aa	Known RBP	2.87	□□□□□ -1.95
TFB1	YDR311W	GLK1	P17709	500 aa	Known RBP	2.87	□□□□□ -1.95
TFB1	YDR311W	APN1	P22936	367 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	ADH7	P25377	361 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	UGP1	P32861	499 aa	Known RBP	2.87	□□□□□ -1.95
TFB1	YDR311W	SNU114	P36048	1008 aa	Known RBP	2.87	□□□□□ -1.95
TFB1	YDR311W	SIF2	P38262	535 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	RRT2	P38332	387 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	PCL5	P38794	229 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	LAS21	P40367	830 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	NAS2	P40555	220 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	STB2	P46679	850 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	COQ6	P53318	479 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	TOF1	P53840	1238 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	WAR1	Q03631	944 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	FIN1	Q03898	291 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	YDR341C	Q05506	607 aa	Known RBP	2.87	□□□□□ -1.95
TFB1	YDR311W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.87	□□□□□ -1.95	not detected
TFB1	YDR311W	ZPS1	Q12512	249 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	SEC39	Q12745	709 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	YML133C	Q03099	1374 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	YLL067C	Q07888	1374 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	YLL066C	Q99208	1374 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	RPL1A	P0CX43	217 aa	Known RBP	2.87	□□□□□ -1.95
TFB1	YDR311W	RPL1B	P0CX44	217 aa	Known RBP	2.87	□□□□□ -1.95
TFB1	YDR311W	ART10	P18634	518 aa	Known RBP	2.87	□□□□□ -1.95
TFB1	YDR311W	PPH22	P23595	377 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	ELO2	P25358	347 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	IMG1	P25626	169 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	PTC6	P25646	442 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	GSH1	P32477	678 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	RPN2	P32565	945 aa	Known RBP	2.87	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms