RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W YJL045WP47052 634 aa5.54□□□□□ -1.52
FOB1YDR110W WAR1Q03631 944 aa5.54□□□□□ -1.52
FOB1YDR110W PPM1Q04081 328 aa5.54□□□□□ -1.52
FOB1YDR110W URH1Q04179 340 aa5.54□□□□□ -1.52
FOB1YDR110W GFD1Q04839 188 aaKnown RBP5.54□□□□□ -1.52
FOB1YDR110W SEC10Q06245 871 aa5.54□□□□□ -1.52
FOB1YDR110W ATG17Q06410 417 aa5.54□□□□□ -1.52
FOB1YDR110W GPB1Q08886 897 aa5.54□□□□□ -1.52
FOB1YDR110W TFB5Q3E7C1 72 aaPredicted RBP5.54□□□□□ -1.52
FOB1YDR110W RPL6BP05739 176 aaKnown RBP5.54□□□□□ -1.52
FOB1YDR110W YAK1P14680 807 aa5.54□□□□□ -1.52
FOB1YDR110W RVS161P25343 265 aaKnown RBP5.54□□□□□ -1.52
FOB1YDR110W MLF3P32047 452 aa5.54□□□□□ -1.52
FOB1YDR110W SLX5P32828 619 aaKnown RBP5.54□□□□□ -1.52
FOB1YDR110W PTK1P36002 662 aaPredicted RBP5.54□□□□□ -1.52
FOB1YDR110W MRPL10P36520 322 aa5.54□□□□□ -1.52
FOB1YDR110W YBL029WP38201 376 aa5.54□□□□□ -1.52
FOB1YDR110W CST26P38226 397 aa5.54□□□□□ -1.52
FOB1YDR110W GIP1P38229 639 aa5.54□□□□□ -1.52
FOB1YDR110W UTP7P40055 554 aaKnown RBP5.54□□□□□ -1.52
FOB1YDR110W DOT5P40553 215 aa5.54□□□□□ -1.52
FOB1YDR110W HXT10P43581 546 aa5.54□□□□□ -1.52
FOB1YDR110W MND1P53102 219 aa5.54□□□□□ -1.52
FOB1YDR110W RPL6AQ02326 176 aaKnown RBP5.54□□□□□ -1.52
FOB1YDR110W DPL1Q05567 589 aa5.54□□□□□ -1.52
FOB1YDR110W TRE1Q08919 783 aa5.54□□□□□ -1.52
FOB1YDR110W MED4Q12343 284 aa5.54□□□□□ -1.52
FOB1YDR110W YLR302CO13544 120 aa5.53□□□□□ -1.52
FOB1YDR110W HTA1P04911 132 aaKnown RBP5.53□□□□□ -1.52
FOB1YDR110W HTA2P04912 132 aa5.53□□□□□ -1.52
FOB1YDR110W TPK2P06245 380 aa5.53□□□□□ -1.52
FOB1YDR110W PCK1P10963 549 aa5.53□□□□□ -1.52
FOB1YDR110W UTR1P21373 530 aa5.53□□□□□ -1.52
FOB1YDR110W MRPL8P22353 238 aa5.53□□□□□ -1.52
FOB1YDR110W SNT1P25357 1226 aa5.53□□□□□ -1.52
FOB1YDR110W YCL068CP25593 260 aa5.53□□□□□ -1.52
FOB1YDR110W LRG1P35688 1017 aa5.53□□□□□ -1.52
FOB1YDR110W VID24P38263 362 aa5.53□□□□□ -1.52
FOB1YDR110W POP7P38291 140 aa5.53□□□□□ -1.52
FOB1YDR110W SFB3P38810 929 aa5.53□□□□□ -1.52
FOB1YDR110W ALG5P40350 334 aa5.53□□□□□ -1.52
FOB1YDR110W ALY2P47029 1046 aa5.53□□□□□ -1.52
FOB1YDR110W PET130P47065 347 aa5.53□□□□□ -1.52
FOB1YDR110W GLO1P50107 326 aa5.53□□□□□ -1.52
FOB1YDR110W RBS1Q05672 457 aaKnown RBP5.53□□□□□ -1.52
FOB1YDR110W GET4Q12125 312 aa5.53□□□□□ -1.52
FOB1YDR110W TIP41Q12199 356 aa5.53□□□□□ -1.52
FOB1YDR110W WTM2Q12206 467 aa5.53□□□□□ -1.52
FOB1YDR110W SVS1Q12254 260 aa5.53□□□□□ -1.52
FOB1YDR110W NTO1Q12311 748 aa5.53□□□□□ -1.52
FOB1YDR110W SSA3P09435 649 aaKnown RBP5.52□□□□□ -1.53
FOB1YDR110W SEC63P14906 663 aa5.52□□□□□ -1.53
FOB1YDR110W DGR2P32330 852 aa5.52□□□□□ -1.53
FOB1YDR110W SIP1P32578 815 aa5.52□□□□□ -1.53
FOB1YDR110W YBR139WP38109 508 aa5.52□□□□□ -1.53
FOB1YDR110W NEM1P38757 446 aa5.52□□□□□ -1.53
FOB1YDR110W AFG3P39925 761 aa5.52□□□□□ -1.53
FOB1YDR110W SGN1P40561 250 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
FOB1YDR110W YAP5P40574 245 aa5.52□□□□□ -1.53
FOB1YDR110W CEP3P40969 608 aa5.52□□□□□ -1.53
FOB1YDR110W EMC2P47133 292 aaKnown RBP5.52□□□□□ -1.53
FOB1YDR110W APT1P49435 187 aaKnown RBP5.52□□□□□ -1.53
FOB1YDR110W HNT2P49775 206 aa5.52□□□□□ -1.53
FOB1YDR110W RTT102P53330 157 aa5.52□□□□□ -1.53
FOB1YDR110W EAF7P53911 425 aaKnown RBP5.52□□□□□ -1.53
FOB1YDR110W SRL4Q03085 281 aa5.52□□□□□ -1.53
FOB1YDR110W NBP2Q12163 236 aa5.52□□□□□ -1.53
FOB1YDR110W Q0142Q9ZZW4 58 aa5.52□□□□□ -1.53
FOB1YDR110W RPP2BP02400 110 aaKnown RBP5.51□□□□□ -1.53
FOB1YDR110W GAL4P04386 881 aa5.51□□□□□ -1.53
FOB1YDR110W KGD1P20967 1014 aaKnown RBP5.51□□□□□ -1.53
FOB1YDR110W DPB2P24482 689 aaPredicted RBP5.51□□□□□ -1.53
FOB1YDR110W ADY2P25613 283 aa5.51□□□□□ -1.53
FOB1YDR110W FAA1P30624 700 aaKnown RBP5.51□□□□□ -1.53
FOB1YDR110W ARP2P32381 391 aaKnown RBP5.51□□□□□ -1.53
FOB1YDR110W SEC31P38968 1273 aaKnown RBP5.51□□□□□ -1.53
FOB1YDR110W FET4P40988 552 aa5.51□□□□□ -1.53
FOB1YDR110W GTO1P48239 356 aa5.51□□□□□ -1.53
FOB1YDR110W IMA1P53051 589 aa5.51□□□□□ -1.53
FOB1YDR110W COG1P53079 417 aa5.51□□□□□ -1.53
FOB1YDR110W TWF1P53250 332 aa5.51□□□□□ -1.53
FOB1YDR110W YNR071CP53757 342 aa5.51□□□□□ -1.53
FOB1YDR110W NOP15P53927 220 aaPredicted RBP5.51□□□□□ -1.53
FOB1YDR110W SLT2Q00772 484 aa5.51□□□□□ -1.53
FOB1YDR110W ACS1Q01574 713 aa5.51□□□□□ -1.53
FOB1YDR110W SPO19Q03029 223 aa5.51□□□□□ -1.53
FOB1YDR110W PPN1Q04119 674 aa5.51□□□□□ -1.53
FOB1YDR110W SMA2Q04658 369 aa5.51□□□□□ -1.53
FOB1YDR110W STE23Q06010 1027 aa5.51□□□□□ -1.53
FOB1YDR110W THI22Q06490 572 aa5.51□□□□□ -1.53
FOB1YDR110W SAM1P10659 382 aaKnown RBP5.51□□□□□ -1.53
FOB1YDR110W RPC31P17890 251 aa5.51□□□□□ -1.53
FOB1YDR110W UBA1P22515 1024 aaKnown RBP5.51□□□□□ -1.53
FOB1YDR110W BEM1P29366 551 aa5.51□□□□□ -1.53
FOB1YDR110W REG2P38232 338 aa5.51□□□□□ -1.53
FOB1YDR110W SET5P38890 526 aaKnown RBP5.51□□□□□ -1.53
FOB1YDR110W PNT1P38969 423 aa5.51□□□□□ -1.53
FOB1YDR110W SER3P40054 469 aa5.51□□□□□ -1.53
FOB1YDR110W BST1P43571 1029 aa5.51□□□□□ -1.53
FOB1YDR110W BRO1P48582 844 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms