RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	SGF73	P53165	657 aa		3.38	□□□□□ -1.87
SLU7	YDR088C	IZH1	Q03419	316 aa		3.38	□□□□□ -1.87
SLU7	YDR088C	TMA64	Q04600	565 aa	Known RBP	3.38	□□□□□ -1.87
SLU7	YDR088C	ADE13	Q05911	482 aa	Known RBP	3.38	□□□□□ -1.87
SLU7	YDR088C	RTT109	Q07794	436 aa		3.38	□□□□□ -1.87
SLU7	YDR088C	DSE3	Q08729	430 aa		3.38	□□□□□ -1.87
SLU7	YDR088C	UBX3	Q12229	455 aa		3.38	□□□□□ -1.87
SLU7	YDR088C	SPE4	Q12455	300 aa		3.38	□□□□□ -1.87
SLU7	YDR088C	ENT1	Q12518	454 aa		3.38	□□□□□ -1.87
SLU7	YDR088C	YBR126W-A	Q8TGU7	68 aa		3.38	□□□□□ -1.87
SLU7	YDR088C	SEM1	O94742	89 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	PRE8	P23639	250 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	POL4	P25615	582 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	DIA4	P38705	446 aa	Predicted RBP	3.37	□□□□□ -1.87
SLU7	YDR088C	YNG2	P38806	282 aa	Known RBP	3.37	□□□□□ -1.87
SLU7	YDR088C	ANS1	P38832	159 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	TMA108	P40462	946 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	TES1	P41903	349 aa	Known RBP	3.37	□□□□□ -1.87
SLU7	YDR088C	VPS25	P47142	202 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	DSD1	P53095	428 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	ZDS2	P54786	942 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	YML037C	Q03703	340 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	YMR034C	Q05131	434 aa	Predicted RBP	3.37	□□□□□ -1.87
SLU7	YDR088C	GRS2	Q06817	618 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	TCO89	Q08921	799 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	EDE1	P34216	1381 aa		3.37	□□□□□ -1.87
SLU7	YDR088C	ARD1	P07347	238 aa	Predicted RBP	3.36	□□□□□ -1.87
SLU7	YDR088C	MET8	P15807	274 aa		3.36	□□□□□ -1.87
SLU7	YDR088C	LCB1	P25045	558 aa	Known RBP	3.36	□□□□□ -1.87
SLU7	YDR088C	PGS1	P25578	521 aa		3.36	□□□□□ -1.87
SLU7	YDR088C	UIP3	P39547	235 aa		3.36	□□□□□ -1.87
SLU7	YDR088C	YIL060W	P40519	144 aa		3.36	□□□□□ -1.87
SLU7	YDR088C	DIA3	P52290	468 aa		3.36	□□□□□ -1.87
SLU7	YDR088C	STR3	P53101	465 aa	Known RBP	3.36	□□□□□ -1.87
SLU7	YDR088C	YMR178W	Q03219	274 aa	Known RBP	3.36	□□□□□ -1.87
SLU7	YDR088C	GSH2	Q08220	491 aa		3.36	□□□□□ -1.87
SLU7	YDR088C	YPL272C	Q08984	517 aa		3.36	□□□□□ -1.87
SLU7	YDR088C	RRI2	Q12348	645 aa		3.36	□□□□□ -1.87
SLU7	YDR088C	KGD1	P20967	1014 aa	Known RBP	3.35	□□□□□ -1.87
SLU7	YDR088C	VMA16	P23968	213 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	SYN8	P31377	255 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	SAC6	P32599	642 aa	Known RBP	3.35	□□□□□ -1.87
SLU7	YDR088C	AUR1	P36107	401 aa	Predicted RBP	3.35	□□□□□ -1.87
SLU7	YDR088C	YBL029W	P38201	376 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	ELO1	P39540	310 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	VRG4	P40107	337 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	RPS10B	P46784	105 aa	Known RBP	3.35	□□□□□ -1.87
SLU7	YDR088C	PKP2	P53170	491 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	TIM10	P87108	93 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	ARP9	Q05123	467 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	MCP2	Q06567	569 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	POS5	Q06892	414 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	GRC3	Q07845	632 aa		3.35	□□□□□ -1.87
SLU7	YDR088C	RPS10A	Q08745	105 aa	Predicted RBP	3.35	□□□□□ -1.87
SLU7	YDR088C	CBP1	P07252	654 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	OLE1	P21147	510 aa	Known RBP	3.34	□□□□□ -1.87
SLU7	YDR088C	YKL050C	P35736	922 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	MIA40	P36046	403 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	STV1	P37296	890 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	AGP2	P38090	596 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	MET30	P39014	640 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	CCT6	P39079	546 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	SMC3	P47037	1230 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	MRX6	P48564	524 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	ESBP6	P53918	673 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	UTP21	Q06078	939 aa	Predicted RBP	3.34	□□□□□ -1.87
SLU7	YDR088C	YDL218W	Q07629	317 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	MLH2	Q07980	695 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	APL4	Q12028	832 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	HUA2	Q12134	243 aa		3.34	□□□□□ -1.87
SLU7	YDR088C	NOP58	Q12499	511 aa	Known RBP	3.34	□□□□□ -1.87
SLU7	YDR088C	ADH7	P25377	361 aa		3.33	□□□□□ -1.88
SLU7	YDR088C	SGF29	P25554	259 aa		3.33	□□□□□ -1.88
SLU7	YDR088C	YIH1	P25637	258 aa		3.33	□□□□□ -1.88
SLU7	YDR088C	IMP2'	P32351	346 aa		3.33	□□□□□ -1.88
SLU7	YDR088C	TSC10	P38342	320 aa		3.33	□□□□□ -1.88
SLU7	YDR088C	SGM1	P47166	707 aa		3.33	□□□□□ -1.88
SLU7	YDR088C	EKI1	Q03764	534 aa		3.33	□□□□□ -1.88
SLU7	YDR088C	ARP10	Q04549	284 aa		3.33	□□□□□ -1.88
SLU7	YDR088C	DPB4	Q04603	196 aa	Known RBP	3.33	□□□□□ -1.88
SLU7	YDR088C	ATG26	Q06321	1198 aa		3.33	□□□□□ -1.88
SLU7	YDR088C	IMH1	Q06704	911 aa	Known RBP	3.33	□□□□□ -1.88
SLU7	YDR088C	TEN1	Q07921	160 aa		3.33	□□□□□ -1.88
SLU7	YDR088C	YFL068W	P0CX99	160 aa		3.32	□□□□□ -1.88
SLU7	YDR088C	YLL066W-A	P0CY00	160 aa		3.32	□□□□□ -1.88
SLU7	YDR088C	YLL067W-A	P0CY01	160 aa		3.32	□□□□□ -1.88
SLU7	YDR088C	DBP8	P38719	431 aa		3.32	□□□□□ -1.88
SLU7	YDR088C	FLC2	P39719	783 aa		3.32	□□□□□ -1.88
SLU7	YDR088C	YIL169C	P40442	995 aa		3.32	□□□□□ -1.88
SLU7	YDR088C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.32	□□□□□ -1.88	not detected
SLU7	YDR088C	RPC11	Q04307	110 aa	Predicted RBP	3.32	□□□□□ -1.88
SLU7	YDR088C	BUD22	Q04347	519 aa	Known RBP	3.32	□□□□□ -1.88
SLU7	YDR088C	EMI2	Q04409	500 aa	Known RBP	3.32	□□□□□ -1.88
SLU7	YDR088C	LUC7	Q07508	261 aa	Predicted RBP	3.32	□□□□□ -1.88
SLU7	YDR088C	NMD4	Q12129	218 aa		3.32	□□□□□ -1.88
SLU7	YDR088C	LEU9	Q12166	604 aa	Known RBP	3.32	□□□□□ -1.88
SLU7	YDR088C	MED1	Q12321	566 aa		3.32	□□□□□ -1.88
SLU7	YDR088C	SGS1	P35187	1447 aa		3.32	□□□□□ -1.88
SLU7	YDR088C	MF(ALPHA)1	P01149	165 aa		3.31	□□□□□ -1.88
SLU7	YDR088C	SEC53	P07283	254 aa	Known RBP	3.31	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 106.4 ms