RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A VFA1P40080 203 aa0.05□□□□□ -2.4
TFB5YDR079C-A YIL089WP40500 205 aa0.05□□□□□ -2.4
TFB5YDR079C-A AXL1P40851 1208 aa0.05□□□□□ -2.4
TFB5YDR079C-A YNR071CP53757 342 aa0.05□□□□□ -2.4
TFB5YDR079C-A ECM11Q04110 302 aa0.05□□□□□ -2.4
TFB5YDR079C-A NSE3Q05541 303 aa0.05□□□□□ -2.4
TFB5YDR079C-A MEC1P38111 2368 aa0.05□□□□□ -2.4
TFB5YDR079C-A DRS2P39524 1355 aa0.05□□□□□ -2.4
TFB5YDR079C-A TAF2P23255 1407 aa0.04□□□□□ -2.4
TFB5YDR079C-A SRB8P25648 1427 aa0.04□□□□□ -2.4
TFB5YDR079C-A MET5P47169 1442 aa0.04□□□□□ -2.4
TFB5YDR079C-A SWR1Q05471 1514 aa0.04□□□□□ -2.4
TFB5YDR079C-A TY3B-GQ99315 1547 aa0.04□□□□□ -2.4
TFB5YDR079C-A THO2P53552 1597 aaKnown RBP0.04□□□□□ -2.4
TFB5YDR079C-A YJL197C-AP0C5P0 93 aa0.04□□□□□ -2.4
TFB5YDR079C-A PUT3P25502 979 aaPredicted RBP0.04□□□□□ -2.4
TFB5YDR079C-A CYM1P32898 989 aa0.04□□□□□ -2.4
TFB5YDR079C-A ECM15P35195 104 aa0.04□□□□□ -2.4
TFB5YDR079C-A NPR2P39923 615 aa0.04□□□□□ -2.4
TFB5YDR079C-A PTI1P39927 425 aaPredicted RBP0.04□□□□□ -2.4
TFB5YDR079C-A YIL060WP40519 144 aa0.04□□□□□ -2.4
TFB5YDR079C-A PFS2P42841 465 aaKnown RBP0.04□□□□□ -2.4
TFB5YDR079C-A BIR1P47134 954 aa0.04□□□□□ -2.4
TFB5YDR079C-A LYS4P49367 693 aaPredicted RBP0.04□□□□□ -2.4
TFB5YDR079C-A YGL082WP53155 381 aa0.04□□□□□ -2.4
TFB5YDR079C-A PIB2P53191 635 aa0.04□□□□□ -2.4
TFB5YDR079C-A CSL4P53859 292 aaPredicted RBP0.04□□□□□ -2.4
TFB5YDR079C-A YMR087WQ04299 284 aa0.04□□□□□ -2.4
TFB5YDR079C-A GYL1Q04322 720 aa0.04□□□□□ -2.4
TFB5YDR079C-A YPQ1Q12010 308 aa0.04□□□□□ -2.4
TFB5YDR079C-A BNI1P41832 1953 aa0.03□□□□□ -2.4
TFB5YDR079C-A RPS8AP0CX39 200 aaKnown RBP0.03□□□□□ -2.4
TFB5YDR079C-A RPS8BP0CX40 200 aaKnown RBP0.03□□□□□ -2.4
TFB5YDR079C-A YNK1P36010 153 aaKnown RBP0.03□□□□□ -2.4
TFB5YDR079C-A NMD2P38798 1089 aaKnown RBP0.03□□□□□ -2.4
TFB5YDR079C-A UBA4P38820 440 aa0.03□□□□□ -2.4
TFB5YDR079C-A EAF6P47128 113 aa0.03□□□□□ -2.4
TFB5YDR079C-A OCA1P50946 238 aaPredicted RBP0.03□□□□□ -2.4
TFB5YDR079C-A ECM30Q06673 1274 aa0.03□□□□□ -2.4
TFB5YDR079C-A RTK1Q12100 620 aaPredicted RBP0.03□□□□□ -2.4
TFB5YDR079C-A PDH1Q12428 516 aaKnown RBP0.03□□□□□ -2.4
TFB5YDR079C-A ENT1Q12518 454 aa0.03□□□□□ -2.4
TFB5YDR079C-A SPP41P38904 1435 aa0.03□□□□□ -2.41
TFB5YDR079C-A BUD4P47136 1447 aa0.03□□□□□ -2.41
TFB5YDR079C-A GEA2P39993 1459 aaKnown RBP0.03□□□□□ -2.41
TFB5YDR079C-A RAP1P11938 827 aa0.02□□□□□ -2.41
TFB5YDR079C-A SEC62P21825 274 aa0.02□□□□□ -2.41
TFB5YDR079C-A RPS7AP26786 190 aaKnown RBP0.02□□□□□ -2.41
TFB5YDR079C-A GAC1P28006 793 aa0.02□□□□□ -2.41
TFB5YDR079C-A PSO2P30620 661 aa0.02□□□□□ -2.41
TFB5YDR079C-A PRP19P32523 503 aaKnown RBP0.02□□□□□ -2.41
TFB5YDR079C-A APE3P37302 537 aaKnown RBP0.02□□□□□ -2.41
TFB5YDR079C-A YPT35P38815 214 aaKnown RBP0.02□□□□□ -2.41
TFB5YDR079C-A BUD16P39988 312 aa0.02□□□□□ -2.41
TFB5YDR079C-A FAF1P40546 346 aaPredicted RBP0.02□□□□□ -2.41
TFB5YDR079C-A MAD2P40958 196 aa0.02□□□□□ -2.41
TFB5YDR079C-A GZF3P42944 551 aaKnown RBP0.02□□□□□ -2.41
TFB5YDR079C-A RPN11P43588 306 aaKnown RBP0.02□□□□□ -2.41
TFB5YDR079C-A POL31P46957 487 aa0.02□□□□□ -2.41
TFB5YDR079C-A RNR4P49723 345 aaKnown RBP0.02□□□□□ -2.41
TFB5YDR079C-A YNL193WP53870 558 aa0.02□□□□□ -2.41
TFB5YDR079C-A VHS1Q03785 461 aa0.02□□□□□ -2.41
TFB5YDR079C-A NTG2Q08214 380 aa0.02□□□□□ -2.41
TFB5YDR079C-A THI20Q08224 551 aa0.02□□□□□ -2.41
TFB5YDR079C-A BAG7Q12128 409 aa0.02□□□□□ -2.41
TFB5YDR079C-A YLR125WQ12138 136 aa0.02□□□□□ -2.41
TFB5YDR079C-A NYV1Q12255 253 aa0.02□□□□□ -2.41
TFB5YDR079C-A RSF2P46974 1380 aa0.02□□□□□ -2.41
TFB5YDR079C-A AUS1Q08409 1394 aa0.02□□□□□ -2.41
TFB5YDR079C-A SEN1Q00416 2231 aaKnown RBP0.02□□□□□ -2.41
TFB5YDR079C-A HAP1P0CE41 1502 aa0.02□□□□□ -2.41
TFB5YDR079C-A PDR10P51533 1564 aa0.02□□□□□ -2.41
TFB5YDR079C-A YOR093CQ12275 1648 aa0.02□□□□□ -2.41
TFB5YDR079C-A DYN1P36022 4092 aa0.01□□□□□ -2.41
TFB5YDR079C-A HIS4P00815 799 aaKnown RBP0.01□□□□□ -2.41
TFB5YDR079C-A IPP1P00817 287 aaKnown RBP0.01□□□□□ -2.41
TFB5YDR079C-A SGV1P23293 657 aaKnown RBP0.01□□□□□ -2.41
TFB5YDR079C-A YCR022CP25620 114 aa0.01□□□□□ -2.41
TFB5YDR079C-A VPS17P32913 551 aa0.01□□□□□ -2.41
TFB5YDR079C-A UBP13P38187 747 aa0.01□□□□□ -2.41
TFB5YDR079C-A VID24P38263 362 aa0.01□□□□□ -2.41
TFB5YDR079C-A ARP1P38696 384 aa0.01□□□□□ -2.41
TFB5YDR079C-A YAP3P38749 330 aa0.01□□□□□ -2.41
TFB5YDR079C-A AFG3P39925 761 aa0.01□□□□□ -2.41
TFB5YDR079C-A FMP10P40098 244 aa0.01□□□□□ -2.41
TFB5YDR079C-A PSF2P40359 213 aa0.01□□□□□ -2.41
TFB5YDR079C-A SOL4P53315 255 aa0.01□□□□□ -2.41
TFB5YDR079C-A ESF2P53743 316 aaKnown RBP0.01□□□□□ -2.41
TFB5YDR079C-A BSC5P53755 489 aa0.01□□□□□ -2.41
TFB5YDR079C-A SKY1Q03656 742 aa0.01□□□□□ -2.41
TFB5YDR079C-A GTB1Q04924 702 aa0.01□□□□□ -2.41
TFB5YDR079C-A GLO2Q05584 274 aa0.01□□□□□ -2.41
TFB5YDR079C-A TFC6Q06339 672 aa0.01□□□□□ -2.41
TFB5YDR079C-A IMH1Q06704 911 aaKnown RBP0.01□□□□□ -2.41
TFB5YDR079C-A VAM6Q07468 1049 aa0.01□□□□□ -2.41
TFB5YDR079C-A SIR4P11978 1358 aa0.01□□□□□ -2.41
TFB5YDR079C-A HIR3P47171 1648 aa0.01□□□□□ -2.41
TFB5YDR079C-A DNF2Q12675 1612 aa0.01□□□□□ -2.41
TFB5YDR079C-A CDC25P04821 1589 aa0□□□□□ -2.41
TFB5YDR079C-A TOP2P06786 1428 aaKnown RBP0□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms