RNA–Protein interactions for RNA: YDL196W

YDL196W, Transcript of Dubious open reading frame, yeastyeast

Gene YDL196W, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDL196WYDL196W PMR1P13586 950 aa1.25□□□□□ -2.21
YDL196WYDL196W VPS17P32913 551 aa1.25□□□□□ -2.21
YDL196WYDL196W SIP2P34164 415 aaKnown RBP1.25□□□□□ -2.21
YDL196WYDL196W ESL2P36168 1195 aa1.25□□□□□ -2.21
YDL196WYDL196W MTC4P38335 694 aaKnown RBP1.25□□□□□ -2.21
YDL196WYDL196W ARP1P38696 384 aa1.25□□□□□ -2.21
YDL196WYDL196W SMC3P47037 1230 aa1.25□□□□□ -2.21
YDL196WYDL196W TAN1P53072 289 aaPredicted RBP1.25□□□□□ -2.21
YDL196WYDL196W NNF2P53253 936 aa1.25□□□□□ -2.21
YDL196WYDL196W BTN2P53286 410 aa1.25□□□□□ -2.21
YDL196WYDL196W CPR6P53691 371 aaKnown RBP1.25□□□□□ -2.21
YDL196WYDL196W IST1P53843 298 aaPredicted RBP1.25□□□□□ -2.21
YDL196WYDL196W IOC4Q04213 475 aa1.25□□□□□ -2.21
YDL196WYDL196W TMC1Q08422 150 aaPredicted RBP1.25□□□□□ -2.21
YDL196WYDL196W RRP6Q12149 733 aaKnown RBP1.25□□□□□ -2.21
YDL196WYDL196W YOL114CQ12322 202 aa1.25□□□□□ -2.21
YDL196WYDL196W TMA7Q3E764 64 aaKnown RBP1.25□□□□□ -2.21
YDL196WYDL196W YCL021W-AQ96VH3 125 aa1.25□□□□□ -2.21
YDL196WYDL196W PIF1P07271 859 aa1.24□□□□□ -2.21
YDL196WYDL196W NAT1P12945 854 aaKnown RBP1.24□□□□□ -2.21
YDL196WYDL196W SEC62P21825 274 aa1.24□□□□□ -2.21
YDL196WYDL196W DPB3P27344 201 aa1.24□□□□□ -2.21
YDL196WYDL196W CMK1P27466 446 aaKnown RBP1.24□□□□□ -2.21
YDL196WYDL196W SNC1P31109 117 aa1.24□□□□□ -2.21
YDL196WYDL196W SAC6P32599 642 aaKnown RBP1.24□□□□□ -2.21
YDL196WYDL196W TFC3P34111 1160 aa1.24□□□□□ -2.21
YDL196WYDL196W ECM15P35195 104 aa1.24□□□□□ -2.21
YDL196WYDL196W CTF18P49956 741 aa1.24□□□□□ -2.21
YDL196WYDL196W RTS3P53289 263 aa1.24□□□□□ -2.21
YDL196WYDL196W PAP2P53632 584 aaKnown RBP1.24□□□□□ -2.21
YDL196WYDL196W FOL1P53848 824 aa1.24□□□□□ -2.21
YDL196WYDL196W SAM50P53969 484 aa1.24□□□□□ -2.21
YDL196WYDL196W MOT3P54785 490 aaKnown RBP1.24□□□□□ -2.21
YDL196WYDL196W TRS130Q03660 1102 aa1.24□□□□□ -2.21
YDL196WYDL196W VMS1Q04311 632 aaKnown RBP1.24□□□□□ -2.21
YDL196WYDL196W ADE13Q05911 482 aaKnown RBP1.24□□□□□ -2.21
YDL196WYDL196W SSK1Q07084 712 aa1.24□□□□□ -2.21
YDL196WYDL196W THI20Q08224 551 aa1.24□□□□□ -2.21
YDL196WYDL196W HEM2P05373 342 aa1.23□□□□□ -2.21
YDL196WYDL196W ATP4P05626 244 aa1.23□□□□□ -2.21
YDL196WYDL196W SNF3P10870 884 aa1.23□□□□□ -2.21
YDL196WYDL196W SST2P11972 698 aaKnown RBP1.23□□□□□ -2.21
YDL196WYDL196W SRB5P32585 307 aa1.23□□□□□ -2.21
YDL196WYDL196W PRS1P32895 427 aaKnown RBP1.23□□□□□ -2.21
YDL196WYDL196W YKL133CP36066 463 aa1.23□□□□□ -2.21
YDL196WYDL196W UBA4P38820 440 aa1.23□□□□□ -2.21
YDL196WYDL196W NPR2P39923 615 aa1.23□□□□□ -2.21
YDL196WYDL196W PKP1P40530 394 aa1.23□□□□□ -2.21
YDL196WYDL196W FAF1P40546 346 aaPredicted RBP1.23□□□□□ -2.21
YDL196WYDL196W YJR008WP47085 338 aa1.23□□□□□ -2.21
YDL196WYDL196W ASE1P50275 885 aa1.23□□□□□ -2.21
YDL196WYDL196W MHR1Q06630 226 aa1.23□□□□□ -2.21
YDL196WYDL196W YOL057WQ08225 711 aa1.23□□□□□ -2.21
YDL196WYDL196W HNT3Q08702 217 aa1.23□□□□□ -2.21
YDL196WYDL196W APL4Q12028 832 aa1.23□□□□□ -2.21
YDL196WYDL196W NYV1Q12255 253 aa1.23□□□□□ -2.21
YDL196WYDL196W RRP12Q12754 1228 aaKnown RBP1.23□□□□□ -2.21
YDL196WYDL196W TOP1P04786 769 aa1.22□□□□□ -2.21
YDL196WYDL196W HXK2P04807 486 aaKnown RBP1.22□□□□□ -2.21
YDL196WYDL196W ATR1P13090 542 aa1.22□□□□□ -2.21
YDL196WYDL196W SPT15P13393 240 aaKnown RBP1.22□□□□□ -2.21
YDL196WYDL196W NCP1P16603 691 aaKnown RBP1.22□□□□□ -2.21
YDL196WYDL196W LCB1P25045 558 aaKnown RBP1.22□□□□□ -2.21
YDL196WYDL196W RER1P25560 188 aa1.22□□□□□ -2.21
YDL196WYDL196W PGS1P25578 521 aa1.22□□□□□ -2.21
YDL196WYDL196W CDC15P27636 974 aa1.22□□□□□ -2.21
YDL196WYDL196W SPR1P32603 445 aa1.22□□□□□ -2.21
YDL196WYDL196W YME1P32795 747 aa1.22□□□□□ -2.21
YDL196WYDL196W PTH2P34222 208 aa1.22□□□□□ -2.21
YDL196WYDL196W PMU1P36069 295 aa1.22□□□□□ -2.21
YDL196WYDL196W TUL1P36096 758 aa1.22□□□□□ -2.21
YDL196WYDL196W YBR138CP38277 524 aa1.22□□□□□ -2.21
YDL196WYDL196W SPC72P39723 622 aa1.22□□□□□ -2.21
YDL196WYDL196W TPM2P40414 161 aa1.22□□□□□ -2.21
YDL196WYDL196W TIS11P47977 285 aa1.22□□□□□ -2.21
YDL196WYDL196W MSO1P53604 210 aaKnown RBP1.22□□□□□ -2.21
YDL196WYDL196W CSL4P53859 292 aaPredicted RBP1.22□□□□□ -2.21
YDL196WYDL196W YLR152CP54072 576 aa1.22□□□□□ -2.21
YDL196WYDL196W YMR087WQ04299 284 aa1.22□□□□□ -2.21
YDL196WYDL196W BRE1Q07457 700 aaKnown RBP1.22□□□□□ -2.21
YDL196WYDL196W YOR387CQ08910 206 aa1.22□□□□□ -2.21
YDL196WYDL196W YER078W-AQ3E7A2 54 aa1.22□□□□□ -2.21
YDL196WYDL196W FAB1P34756 2278 aa1.21□□□□□ -2.22
YDL196WYDL196W SPE2P21182 396 aa1.21□□□□□ -2.22
YDL196WYDL196W CLB4P24871 460 aa1.21□□□□□ -2.22
YDL196WYDL196W DEG1P31115 442 aaKnown RBP1.21□□□□□ -2.22
YDL196WYDL196W PAD1P33751 242 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
YDL196WYDL196W YKL050CP35736 922 aa1.21□□□□□ -2.22
YDL196WYDL196W ROT2P38138 954 aa1.21□□□□□ -2.22
YDL196WYDL196W LAG1P38703 411 aa1.21□□□□□ -2.22
YDL196WYDL196W VPS27P40343 622 aaKnown RBP1.21□□□□□ -2.22
YDL196WYDL196W DPB11P47027 764 aaPredicted RBP1.21□□□□□ -2.22
YDL196WYDL196W PEX8P53248 589 aa1.21□□□□□ -2.22
YDL196WYDL196W WSC2P53832 503 aa1.21□□□□□ -2.22
YDL196WYDL196W DIC1Q06143 298 aa1.21□□□□□ -2.22
YDL196WYDL196W HIM1Q06674 414 aa1.21□□□□□ -2.22
YDL196WYDL196W TMA16Q08687 178 aa1.21□□□□□ -2.22
YDL196WYDL196W ATG9Q12142 997 aa1.21□□□□□ -2.22
YDL196WYDL196W CAR1P00812 333 aaKnown RBP1.2□□□□□ -2.22
YDL196WYDL196W SUP35P05453 685 aaKnown RBP1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms