RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	HOS2	P53096	452 aa	Predicted RBP	4	□□□□□ -1.77
VMA1	YDL185W	LIF1	P53150	421 aa		4	□□□□□ -1.77
VMA1	YDL185W	CPR8	P53728	308 aa		4	□□□□□ -1.77
VMA1	YDL185W	BSC5	P53755	489 aa		4	□□□□□ -1.77
VMA1	YDL185W	CEG1	Q01159	459 aa	Predicted RBP	4	□□□□□ -1.77
VMA1	YDL185W	ENA2	Q01896	1091 aa		4	□□□□□ -1.77
VMA1	YDL185W	INA17	Q02888	182 aa		4	□□□□□ -1.77
VMA1	YDL185W	DIS3	Q08162	1001 aa	Known RBP	4	□□□□□ -1.77
VMA1	YDL185W	NBA1	Q08229	501 aa	Known RBP	4	□□□□□ -1.77
VMA1	YDL185W	ENA5	Q12691	1091 aa		4	□□□□□ -1.77
VMA1	YDL185W	YMR030W-A	Q3E760	96 aa		4	□□□□□ -1.77
VMA1	YDL185W	RGS2	Q99188	309 aa		4	□□□□□ -1.77
VMA1	YDL185W	GAL10	P04397	699 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	RPS3	P05750	240 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	NSP1	P14907	823 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	RPA135	P22138	1203 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	RVS161	P25343	265 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	ACP1	P32463	125 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	YGL015C	P33199	130 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	MRPL17	P36528	281 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	SEA4	P38164	1038 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	IST2	P38250	946 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	NDT80	P38830	627 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	CYC2	P38909	366 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	SOP4	P39543	234 aa	Predicted RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	MIT1	P40002	666 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	TPN1	P53099	579 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	YNL095C	P53932	642 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	SPR6	Q01684	191 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	YDR249C	Q03787	373 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	SEG1	Q04279	960 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	ARP10	Q04549	284 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	NNT1	Q05874	261 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	THI7	Q05998	598 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	VTA1	Q06263	330 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	YNG1	Q08465	219 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	INO1	P11986	533 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	DMC1	P25453	334 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	ATG22	P25568	528 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	YCR015C	P25616	317 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	CSM1	P25651	190 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	STV1	P37296	890 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	UBX7	P38349	436 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	SUL1	P38359	859 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	DSS1	P39112	969 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	PHM8	P40025	321 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	YFR018C	P43599	363 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	ASN2	P49090	572 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	SAP4	P53036	818 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	SOL4	P53315	255 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	GRX5	Q02784	150 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	ROD1	Q02805	837 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	MUS81	Q04149	632 aa	Predicted RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	YOR059C	Q08448	450 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	SMF3	Q12078	473 aa	Predicted RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	CMR1	Q12510	522 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	YPL119C-A	Q3E751	87 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	YHR213W-A	Q8TGT4	77 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	SPS1	P08458	490 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	RPP1B	P10622	106 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	RPL8A	P17076	256 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	CDC42	P19073	191 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	SLY1	P22213	666 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	TRX1	P22217	103 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	SGV1	P23293	657 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	DBP2	P24783	546 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	CNB1	P25296	175 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	ATP7	P30902	174 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	MRPL40	P36534	297 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	RRP4	P38792	359 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	IPI1	P38803	334 aa	Predicted RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	MNN5	P46982	586 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	AIM23	P47015	356 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	CPR7	P47103	393 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	MND1	P53102	219 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	YPL107W	Q02873	248 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	SNU56	Q03782	492 aa	Known RBP	3.99	□□□□□ -1.77
VMA1	YDL185W	YMR160W	Q03823	816 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	ENV9	Q08651	330 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	YPR022C	Q12139	1133 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	ATG34	Q12292	412 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	YDR061W	Q12298	539 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	MED4	Q12343	284 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	TRM10	Q12400	293 aa		3.99	□□□□□ -1.77
VMA1	YDL185W	CAP2	P13517	287 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	ATP12	P22135	325 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	YCL049C	P25577	312 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	PHA2	P32452	334 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	RPT1	P33299	467 aa	Known RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	TOD6	P34219	525 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	ARN2	P38724	620 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	PAN5	P38787	379 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	IPT1	P38954	527 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	EXO1	P39875	702 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	SPF1	P39986	1215 aa	Known RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	RTA1	P53047	317 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	RPT4	P53549	437 aa	Known RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	ARC35	P53731	342 aa	Known RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	FYV6	P53913	173 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	NSE5	Q03718	556 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms