RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W RPS4BP0CX36 261 aaKnown RBP2.23□□□□□ -2.05
UBP1YDL122W XRS2P33301 854 aa2.23□□□□□ -2.05
UBP1YDL122W LRG1P35688 1017 aa2.23□□□□□ -2.05
UBP1YDL122W TAE1P38340 232 aa2.23□□□□□ -2.05
UBP1YDL122W TSL1P38427 1098 aaKnown RBP2.23□□□□□ -2.05
UBP1YDL122W MSS4P38994 779 aa2.23□□□□□ -2.05
UBP1YDL122W NDE1P40215 560 aa2.23□□□□□ -2.05
UBP1YDL122W YFR020WP43600 232 aa2.23□□□□□ -2.05
UBP1YDL122W PMT4P46971 762 aa2.23□□□□□ -2.05
UBP1YDL122W SMC3P47037 1230 aa2.23□□□□□ -2.05
UBP1YDL122W UBC9P50623 157 aaPredicted RBP2.23□□□□□ -2.05
UBP1YDL122W YGL138CP53122 345 aa2.23□□□□□ -2.05
UBP1YDL122W PCL10P53124 433 aa2.23□□□□□ -2.05
UBP1YDL122W PRM1P53835 661 aa2.23□□□□□ -2.05
UBP1YDL122W OMS1Q06668 471 aa2.23□□□□□ -2.05
UBP1YDL122W NBA1Q08229 501 aaKnown RBP2.23□□□□□ -2.05
UBP1YDL122W RGT2Q12300 763 aa2.23□□□□□ -2.05
UBP1YDL122W YOL114CQ12322 202 aa2.23□□□□□ -2.05
UBP1YDL122W CEX1Q12453 761 aa2.23□□□□□ -2.05
UBP1YDL122W STT4P37297 1900 aa2.23□□□□□ -2.05
UBP1YDL122W RPS21AP0C0V8 87 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W CDC26P14724 124 aa2.22□□□□□ -2.05
UBP1YDL122W ARF2P19146 181 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W DAL7P21826 554 aa2.22□□□□□ -2.05
UBP1YDL122W BEM3P32873 1128 aa2.22□□□□□ -2.05
UBP1YDL122W UBP13P38187 747 aa2.22□□□□□ -2.05
UBP1YDL122W HXT6P39003 570 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W HXT7P39004 570 aa2.22□□□□□ -2.05
UBP1YDL122W DSE1P40077 573 aa2.22□□□□□ -2.05
UBP1YDL122W FTR1P40088 404 aa2.22□□□□□ -2.05
UBP1YDL122W ERR3P42222 437 aa2.22□□□□□ -2.05
UBP1YDL122W BST1P43571 1029 aa2.22□□□□□ -2.05
UBP1YDL122W RPS10BP46784 105 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W RTT101P47050 842 aa2.22□□□□□ -2.05
UBP1YDL122W PRP24P49960 444 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W GTR1Q00582 310 aa2.22□□□□□ -2.05
UBP1YDL122W MUB1Q03162 620 aa2.22□□□□□ -2.05
UBP1YDL122W HRK1Q08732 759 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W RPS10AQ08745 105 aaPredicted RBP2.22□□□□□ -2.05
UBP1YDL122W RAX1Q08760 435 aa2.22□□□□□ -2.05
UBP1YDL122W HMI1Q12039 706 aa2.22□□□□□ -2.05
UBP1YDL122W YDL177CQ12257 170 aa2.22□□□□□ -2.05
UBP1YDL122W PRS5Q12265 496 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W CDC31P06704 161 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W MTF2P10849 440 aa2.22□□□□□ -2.05
UBP1YDL122W THR4P16120 514 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W RNQ1P25367 405 aa2.22□□□□□ -2.05
UBP1YDL122W MSH1P25846 959 aa2.22□□□□□ -2.05
UBP1YDL122W NNK1P36003 928 aa2.22□□□□□ -2.05
UBP1YDL122W YKL023WP36103 277 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W RLP7P40693 322 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W BNA2P47125 453 aa2.22□□□□□ -2.05
UBP1YDL122W RNR4P49723 345 aaKnown RBP2.22□□□□□ -2.05
UBP1YDL122W TAD1P53065 400 aa2.22□□□□□ -2.05
UBP1YDL122W COG7P53195 279 aa2.22□□□□□ -2.05
UBP1YDL122W MRPS35P53292 345 aa2.22□□□□□ -2.05
UBP1YDL122W HOL1P53389 586 aa2.22□□□□□ -2.05
UBP1YDL122W YSA1Q01976 231 aa2.22□□□□□ -2.05
UBP1YDL122W SPC19Q03954 165 aa2.22□□□□□ -2.05
UBP1YDL122W BLS1Q06071 122 aa2.22□□□□□ -2.05
UBP1YDL122W YPR196WQ06595 470 aa2.22□□□□□ -2.05
UBP1YDL122W MDM38Q08179 573 aa2.22□□□□□ -2.05
UBP1YDL122W YDR056CQ12025 205 aa2.22□□□□□ -2.05
UBP1YDL122W DIF1O13577 133 aa2.21□□□□□ -2.06
UBP1YDL122W MDM35O60200 86 aa2.21□□□□□ -2.06
UBP1YDL122W BCY1P07278 416 aaKnown RBP2.21□□□□□ -2.06
UBP1YDL122W RED1P14291 827 aa2.21□□□□□ -2.06
UBP1YDL122W RFA1P22336 621 aaKnown RBP2.21□□□□□ -2.06
UBP1YDL122W MNE1P24720 663 aa2.21□□□□□ -2.06
UBP1YDL122W SWI4P25302 1093 aaKnown RBP2.21□□□□□ -2.06
UBP1YDL122W YCR006CP25350 157 aa2.21□□□□□ -2.06
UBP1YDL122W RER1P25560 188 aa2.21□□□□□ -2.06
UBP1YDL122W PET309P32522 965 aaPredicted RBP2.21□□□□□ -2.06
UBP1YDL122W CDC13P32797 924 aaKnown RBP2.21□□□□□ -2.06
UBP1YDL122W OAF3P36023 863 aa2.21□□□□□ -2.06
UBP1YDL122W PSY4P38193 441 aa2.21□□□□□ -2.06
UBP1YDL122W SAP1P39955 897 aaKnown RBP2.21□□□□□ -2.06
UBP1YDL122W SHR5P41912 237 aa2.21□□□□□ -2.06
UBP1YDL122W ALK1P43633 760 aaKnown RBP2.21□□□□□ -2.06
UBP1YDL122W HXT16P47185 567 aa2.21□□□□□ -2.06
UBP1YDL122W NOG2P53742 486 aaKnown RBP2.21□□□□□ -2.06
UBP1YDL122W PGA2P53903 129 aa2.21□□□□□ -2.06
UBP1YDL122W YMR160WQ03823 816 aa2.21□□□□□ -2.06
UBP1YDL122W YLH47Q06493 454 aa2.21□□□□□ -2.06
UBP1YDL122W RCN2Q12044 265 aa2.21□□□□□ -2.06
UBP1YDL122W MED1Q12321 566 aa2.21□□□□□ -2.06
UBP1YDL122W YVC1Q12324 675 aa2.21□□□□□ -2.06
UBP1YDL122W SMC6Q12749 1114 aa2.21□□□□□ -2.06
UBP1YDL122W RRP12Q12754 1228 aaKnown RBP2.21□□□□□ -2.06
UBP1YDL122W RPS21BQ3E754 87 aaKnown RBP2.21□□□□□ -2.06
UBP1YDL122W CHS1P08004 1131 aa2.21□□□□□ -2.06
UBP1YDL122W TUP1P16649 713 aa2.21□□□□□ -2.06
UBP1YDL122W SEC65P29478 273 aa2.21□□□□□ -2.06
UBP1YDL122W SPR1P32603 445 aa2.21□□□□□ -2.06
UBP1YDL122W TOA1P32773 286 aa2.21□□□□□ -2.06
UBP1YDL122W FAD1P38913 306 aa2.21□□□□□ -2.06
UBP1YDL122W PEX7P39108 375 aa2.21□□□□□ -2.06
UBP1YDL122W YFR018CP43599 363 aa2.21□□□□□ -2.06
UBP1YDL122W YKE2P52553 114 aa2.21□□□□□ -2.06
UBP1YDL122W TNA1P53322 534 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms