RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B GRC3Q07845 632 aa1.79□□□□□ -2.12
HTL1YCR020W-B ARP6Q12509 438 aa1.79□□□□□ -2.12
HTL1YCR020W-B LSB5P25369 354 aa1.78□□□□□ -2.12
HTL1YCR020W-B AGP2P38090 596 aa1.78□□□□□ -2.12
HTL1YCR020W-B ROT2P38138 954 aa1.78□□□□□ -2.12
HTL1YCR020W-B MTC4P38335 694 aaKnown RBP1.78□□□□□ -2.12
HTL1YCR020W-B PRE5P40302 234 aaKnown RBP1.78□□□□□ -2.12
HTL1YCR020W-B CTF18P49956 741 aa1.78□□□□□ -2.12
HTL1YCR020W-B IST1P53843 298 aaPredicted RBP1.78□□□□□ -2.12
HTL1YCR020W-B RPM2Q02773 1202 aa1.78□□□□□ -2.12
HTL1YCR020W-B ERP1Q05359 219 aaKnown RBP1.78□□□□□ -2.12
HTL1YCR020W-B SSK1Q07084 712 aa1.78□□□□□ -2.12
HTL1YCR020W-B CDC45Q08032 650 aa1.78□□□□□ -2.12
HTL1YCR020W-B YOL057WQ08225 711 aa1.78□□□□□ -2.12
HTL1YCR020W-B APL4Q12028 832 aa1.78□□□□□ -2.12
HTL1YCR020W-B RRP6Q12149 733 aaKnown RBP1.78□□□□□ -2.12
HTL1YCR020W-B AYT1Q12226 474 aa1.78□□□□□ -2.12
HTL1YCR020W-B MSS18P08593 268 aa1.77□□□□□ -2.13
HTL1YCR020W-B TY2A-LR1P0C2J4 438 aa1.77□□□□□ -2.13
HTL1YCR020W-B TY2A-FP0CX61 438 aa1.77□□□□□ -2.13
HTL1YCR020W-B TY2A-GR2P0CX62 438 aa1.77□□□□□ -2.13
HTL1YCR020W-B TYR1P20049 452 aa1.77□□□□□ -2.13
HTL1YCR020W-B TY2A-CP25383 438 aa1.77□□□□□ -2.13
HTL1YCR020W-B CDC15P27636 974 aa1.77□□□□□ -2.13
HTL1YCR020W-B SPC110P32380 944 aa1.77□□□□□ -2.13
HTL1YCR020W-B YEL045CP32616 141 aa1.77□□□□□ -2.13
HTL1YCR020W-B VPS17P32913 551 aa1.77□□□□□ -2.13
HTL1YCR020W-B SIP2P34164 415 aaKnown RBP1.77□□□□□ -2.13
HTL1YCR020W-B MRPL36P36531 177 aa1.77□□□□□ -2.13
HTL1YCR020W-B ARP1P38696 384 aa1.77□□□□□ -2.13
HTL1YCR020W-B MTC6P38849 526 aa1.77□□□□□ -2.13
HTL1YCR020W-B PSF2P40359 213 aa1.77□□□□□ -2.13
HTL1YCR020W-B PFK26P40433 827 aaKnown RBP1.77□□□□□ -2.13
HTL1YCR020W-B RPN11P43588 306 aaKnown RBP1.77□□□□□ -2.13
HTL1YCR020W-B SMC3P47037 1230 aa1.77□□□□□ -2.13
HTL1YCR020W-B STR3P53101 465 aaKnown RBP1.77□□□□□ -2.13
HTL1YCR020W-B APJ1P53940 528 aa1.77□□□□□ -2.13
HTL1YCR020W-B SAM50P53969 484 aa1.77□□□□□ -2.13
HTL1YCR020W-B TY2A-DR2Q03483 438 aa1.77□□□□□ -2.13
HTL1YCR020W-B PAL1Q05518 499 aaKnown RBP1.77□□□□□ -2.13
HTL1YCR020W-B TY2A-BQ12260 438 aa1.77□□□□□ -2.13
HTL1YCR020W-B TY2A-OR2Q12293 438 aa1.77□□□□□ -2.13
HTL1YCR020W-B TY2A-DR1Q12392 438 aa1.77□□□□□ -2.13
HTL1YCR020W-B TY2A-OR1Q12439 438 aa1.77□□□□□ -2.13
HTL1YCR020W-B ERG27Q12452 347 aaKnown RBP1.77□□□□□ -2.13
HTL1YCR020W-B PCD1Q12524 340 aa1.77□□□□□ -2.13
HTL1YCR020W-B TY2A-DR3Q99303 438 aa1.77□□□□□ -2.13
HTL1YCR020W-B GAL1P04385 528 aa1.76□□□□□ -2.13
HTL1YCR020W-B TPK1P06244 397 aa1.76□□□□□ -2.13
HTL1YCR020W-B RPL20AP0CX23 172 aaKnown RBP1.76□□□□□ -2.13
HTL1YCR020W-B RPL20BP0CX24 172 aaPredicted RBP1.76□□□□□ -2.13
HTL1YCR020W-B SPE2P21182 396 aa1.76□□□□□ -2.13
HTL1YCR020W-B PGS1P25578 521 aa1.76□□□□□ -2.13
HTL1YCR020W-B SNC1P31109 117 aa1.76□□□□□ -2.13
HTL1YCR020W-B TIF5P38431 405 aaKnown RBP1.76□□□□□ -2.13
HTL1YCR020W-B PKP1P40530 394 aa1.76□□□□□ -2.13
HTL1YCR020W-B DPB11P47027 764 aaPredicted RBP1.76□□□□□ -2.13
HTL1YCR020W-B WSC2P53832 503 aa1.76□□□□□ -2.13
HTL1YCR020W-B CSL4P53859 292 aaPredicted RBP1.76□□□□□ -2.13
HTL1YCR020W-B MET14Q02196 202 aa1.76□□□□□ -2.13
HTL1YCR020W-B YMR087WQ04299 284 aa1.76□□□□□ -2.13
HTL1YCR020W-B DIC1Q06143 298 aa1.76□□□□□ -2.13
HTL1YCR020W-B MLC2Q06580 163 aa1.76□□□□□ -2.13
HTL1YCR020W-B TMA7Q3E764 64 aaKnown RBP1.76□□□□□ -2.13
HTL1YCR020W-B YOR019WQ99248 730 aa1.76□□□□□ -2.13
HTL1YCR020W-B HEM2P05373 342 aa1.75□□□□□ -2.13
HTL1YCR020W-B SSB1P11484 613 aaKnown RBP1.75□□□□□ -2.13
HTL1YCR020W-B NCP1P16603 691 aaKnown RBP1.75□□□□□ -2.13
HTL1YCR020W-B CMK1P27466 446 aaKnown RBP1.75□□□□□ -2.13
HTL1YCR020W-B ECM15P35195 104 aa1.75□□□□□ -2.13
HTL1YCR020W-B YKL050CP35736 922 aa1.75□□□□□ -2.13
HTL1YCR020W-B UBA4P38820 440 aa1.75□□□□□ -2.13
HTL1YCR020W-B PTH1P38876 190 aaKnown RBP1.75□□□□□ -2.13
HTL1YCR020W-B NPR2P39923 615 aa1.75□□□□□ -2.13
HTL1YCR020W-B SSB2P40150 613 aaKnown RBP1.75□□□□□ -2.13
HTL1YCR020W-B YTA12P40341 825 aa1.75□□□□□ -2.13
HTL1YCR020W-B SMK1P41808 388 aa1.75□□□□□ -2.13
HTL1YCR020W-B IDP2P41939 412 aa1.75□□□□□ -2.13
HTL1YCR020W-B EMI2Q04409 500 aaKnown RBP1.75□□□□□ -2.13
HTL1YCR020W-B TMC1Q08422 150 aaPredicted RBP1.75□□□□□ -2.13
HTL1YCR020W-B ATG9Q12142 997 aa1.75□□□□□ -2.13
HTL1YCR020W-B NUC1P08466 329 aa1.74□□□□□ -2.13
HTL1YCR020W-B MSN2P33748 704 aa1.74□□□□□ -2.13
HTL1YCR020W-B TUL1P36096 758 aa1.74□□□□□ -2.13
HTL1YCR020W-B SRO77P38163 1010 aa1.74□□□□□ -2.13
HTL1YCR020W-B IST3P40565 148 aaPredicted RBP1.74□□□□□ -2.13
HTL1YCR020W-B PEX8P53248 589 aa1.74□□□□□ -2.13
HTL1YCR020W-B YPL014WQ02606 381 aa1.74□□□□□ -2.13
HTL1YCR020W-B GLO2Q05584 274 aa1.74□□□□□ -2.13
HTL1YCR020W-B THI20Q08224 551 aa1.74□□□□□ -2.13
HTL1YCR020W-B YCL021W-AQ96VH3 125 aa1.74□□□□□ -2.13
HTL1YCR020W-B PTP2P29461 750 aa1.73□□□□□ -2.13
HTL1YCR020W-B LAG1P38703 411 aa1.73□□□□□ -2.13
HTL1YCR020W-B NPR3P38742 1146 aa1.73□□□□□ -2.13
HTL1YCR020W-B VPS52P39904 641 aa1.73□□□□□ -2.13
HTL1YCR020W-B BUR6P40096 142 aa1.73□□□□□ -2.13
HTL1YCR020W-B REG1Q00816 1014 aa1.73□□□□□ -2.13
HTL1YCR020W-B RLI1Q03195 608 aaKnown RBP1.73□□□□□ -2.13
HTL1YCR020W-B YMR160WQ03823 816 aa1.73□□□□□ -2.13
HTL1YCR020W-B INP53Q12271 1107 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms