RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C PRM6Q04705 352 aa6.07□□□□□ -1.44
RGD1YBR260C SKI7Q08491 747 aaPredicted RBP6.07□□□□□ -1.44
RGD1YBR260C TRM8Q12009 286 aa6.07□□□□□ -1.44
RGD1YBR260C LYS21Q12122 440 aaKnown RBP6.07□□□□□ -1.44
RGD1YBR260C YDR018CQ12185 396 aa6.07□□□□□ -1.44
RGD1YBR260C YOR012WQ12351 137 aa6.07□□□□□ -1.44
RGD1YBR260C YDL206WQ12424 762 aa6.07□□□□□ -1.44
RGD1YBR260C ENA5Q12691 1091 aa6.07□□□□□ -1.44
RGD1YBR260C RIM15P43565 1770 aa6.07□□□□□ -1.44
RGD1YBR260C MYO1P08964 1928 aa6.06□□□□□ -1.44
RGD1YBR260C TUB2P02557 457 aaKnown RBP6.06□□□□□ -1.44
RGD1YBR260C ARO3P14843 370 aaKnown RBP6.06□□□□□ -1.44
RGD1YBR260C PRP5P21372 849 aaPredicted RBP6.06□□□□□ -1.44
RGD1YBR260C AMS1P22855 1083 aa6.06□□□□□ -1.44
RGD1YBR260C ARO7P32178 256 aa6.06□□□□□ -1.44
RGD1YBR260C DBF20P32328 564 aa6.06□□□□□ -1.44
RGD1YBR260C KAP122P32767 1081 aa6.06□□□□□ -1.44
RGD1YBR260C CYM1P32898 989 aa6.06□□□□□ -1.44
RGD1YBR260C MAK5P38112 773 aaPredicted RBP6.06□□□□□ -1.44
RGD1YBR260C SPF1P39986 1215 aaKnown RBP6.06□□□□□ -1.44
RGD1YBR260C LSM8P47093 109 aaKnown RBP6.06□□□□□ -1.44
RGD1YBR260C YPT32P51996 222 aaKnown RBP6.06□□□□□ -1.44
RGD1YBR260C GOR1P53839 350 aa6.06□□□□□ -1.44
RGD1YBR260C ACS1Q01574 713 aa6.06□□□□□ -1.44
RGD1YBR260C YPL068CQ02749 293 aa6.06□□□□□ -1.44
RGD1YBR260C PFA5Q03289 374 aa6.06□□□□□ -1.44
RGD1YBR260C ARP10Q04549 284 aa6.06□□□□□ -1.44
RGD1YBR260C GMC2Q06201 188 aa6.06□□□□□ -1.44
RGD1YBR260C YOL159CQ08300 171 aa6.06□□□□□ -1.44
RGD1YBR260C DSE3Q08729 430 aa6.06□□□□□ -1.44
RGD1YBR260C ICL2Q12031 575 aa6.06□□□□□ -1.44
RGD1YBR260C HAT1Q12341 374 aa6.06□□□□□ -1.44
RGD1YBR260C DGK1Q12382 290 aa6.06□□□□□ -1.44
RGD1YBR260C BCY1P07278 416 aaKnown RBP6.06□□□□□ -1.44
RGD1YBR260C CAP2P13517 287 aa6.06□□□□□ -1.44
RGD1YBR260C NCP1P16603 691 aaKnown RBP6.06□□□□□ -1.44
RGD1YBR260C GIT1P25346 518 aa6.06□□□□□ -1.44
RGD1YBR260C THI4P32318 326 aa6.06□□□□□ -1.44
RGD1YBR260C SPT14P32363 452 aa6.06□□□□□ -1.44
RGD1YBR260C PET309P32522 965 aaPredicted RBP6.06□□□□□ -1.44
RGD1YBR260C MDL2P33311 773 aa6.06□□□□□ -1.44
RGD1YBR260C YKL100CP34248 587 aa6.06□□□□□ -1.44
RGD1YBR260C JEN1P36035 616 aa6.06□□□□□ -1.44
RGD1YBR260C EXO1P39875 702 aa6.06□□□□□ -1.44
RGD1YBR260C LSM1P47017 172 aaKnown RBP6.06□□□□□ -1.44
RGD1YBR260C VPS70P47161 811 aa6.06□□□□□ -1.44
RGD1YBR260C SPC98P53540 846 aa6.06□□□□□ -1.44
RGD1YBR260C VHS1Q03785 461 aa6.06□□□□□ -1.44
RGD1YBR260C APC4Q04601 652 aa6.06□□□□□ -1.44
RGD1YBR260C CSM3Q04659 317 aa6.06□□□□□ -1.44
RGD1YBR260C MFB1Q04922 465 aa6.06□□□□□ -1.44
RGD1YBR260C BSC2Q05611 235 aa6.06□□□□□ -1.44
RGD1YBR260C CUE5Q08412 411 aaKnown RBP6.06□□□□□ -1.44
RGD1YBR260C SYC1Q08553 188 aaPredicted RBP6.06□□□□□ -1.44
RGD1YBR260C SMF3Q12078 473 aaPredicted RBP6.06□□□□□ -1.44
RGD1YBR260C YOS9Q99220 542 aa6.06□□□□□ -1.44
RGD1YBR260C RIF1P29539 1916 aa6.06□□□□□ -1.44
RGD1YBR260C RAD7P06779 565 aa6.05□□□□□ -1.44
RGD1YBR260C MSS18P08593 268 aa6.05□□□□□ -1.44
RGD1YBR260C STE12P13574 688 aa6.05□□□□□ -1.44
RGD1YBR260C CCA1P21269 546 aa6.05□□□□□ -1.44
RGD1YBR260C LST4P34239 828 aa6.05□□□□□ -1.44
RGD1YBR260C SKG1P36169 355 aa6.05□□□□□ -1.44
RGD1YBR260C IMD2P38697 523 aaKnown RBP6.05□□□□□ -1.44
RGD1YBR260C YHR202WP38887 602 aa6.05□□□□□ -1.44
RGD1YBR260C SSO2P39926 295 aa6.05□□□□□ -1.44
RGD1YBR260C EMP65P40085 556 aa6.05□□□□□ -1.44
RGD1YBR260C SER2P42941 309 aa6.05□□□□□ -1.44
RGD1YBR260C YJL049WP47048 450 aa6.05□□□□□ -1.44
RGD1YBR260C YJL045WP47052 634 aa6.05□□□□□ -1.44
RGD1YBR260C YJL016WP47072 561 aa6.05□□□□□ -1.44
RGD1YBR260C CLA4P48562 842 aa6.05□□□□□ -1.44
RGD1YBR260C PEX27Q08580 376 aa6.05□□□□□ -1.44
RGD1YBR260C MUM3Q08750 479 aa6.05□□□□□ -1.44
RGD1YBR260C HAL9Q12180 1030 aa6.05□□□□□ -1.44
RGD1YBR260C FLO11P08640 1367 aa6.05□□□□□ -1.44
RGD1YBR260C TPK1P06244 397 aa6.04□□□□□ -1.44
RGD1YBR260C CHS2P14180 963 aa6.04□□□□□ -1.44
RGD1YBR260C UGA1P17649 471 aa6.04□□□□□ -1.44
RGD1YBR260C FPS1P23900 669 aa6.04□□□□□ -1.44
RGD1YBR260C LYP1P32487 611 aa6.04□□□□□ -1.44
RGD1YBR260C MSS1P32559 526 aaPredicted RBP6.04□□□□□ -1.44
RGD1YBR260C SRB2P34162 210 aa6.04□□□□□ -1.44
RGD1YBR260C GEF1P37020 779 aa6.04□□□□□ -1.44
RGD1YBR260C ECM8P38246 354 aa6.04□□□□□ -1.44
RGD1YBR260C RRP4P38792 359 aaKnown RBP6.04□□□□□ -1.44
RGD1YBR260C BZZ1P38822 633 aa6.04□□□□□ -1.44
RGD1YBR260C YAP1801P38856 637 aa6.04□□□□□ -1.44
RGD1YBR260C DUN1P39009 513 aa6.04□□□□□ -1.44
RGD1YBR260C NDE1P40215 560 aa6.04□□□□□ -1.44
RGD1YBR260C LCB2P40970 561 aa6.04□□□□□ -1.44
RGD1YBR260C SOL4P53315 255 aa6.04□□□□□ -1.44
RGD1YBR260C CUS2P53830 285 aaPredicted RBP6.04□□□□□ -1.44
RGD1YBR260C VPS9P54787 451 aa6.04□□□□□ -1.44
RGD1YBR260C ENT5Q03769 411 aaKnown RBP6.04□□□□□ -1.44
RGD1YBR260C SNX41Q04053 625 aa6.04□□□□□ -1.44
RGD1YBR260C PAB1P04147 577 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
RGD1YBR260C BAR1P12630 587 aa6.04□□□□□ -1.44
RGD1YBR260C RDS2P19541 446 aaKnown RBP6.04□□□□□ -1.44
RGD1YBR260C CAM1P29547 415 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms