RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS20, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS20	YBR254C	MRPL13	Q02204	264 aa		3.22	□□□□□ -1.89
TRS20	YBR254C	FMP45	Q07651	309 aa		3.22	□□□□□ -1.89
TRS20	YBR254C	MTF2	P10849	440 aa		3.21	□□□□□ -1.9
TRS20	YBR254C	UBC1	P21734	215 aa	Known RBP	3.21	□□□□□ -1.9
TRS20	YBR254C	PGS1	P25578	521 aa		3.21	□□□□□ -1.9
TRS20	YBR254C	ATS1	P31386	333 aa		3.21	□□□□□ -1.9
TRS20	YBR254C	ACH1	P32316	526 aa		3.21	□□□□□ -1.9
TRS20	YBR254C	DED81	P38707	554 aa	Known RBP	3.21	□□□□□ -1.9
TRS20	YBR254C	DPB11	P47027	764 aa	Predicted RBP	3.21	□□□□□ -1.9
TRS20	YBR254C	STR3	P53101	465 aa	Known RBP	3.21	□□□□□ -1.9
TRS20	YBR254C	RBA50	Q04418	439 aa		3.21	□□□□□ -1.9
TRS20	YBR254C	TFC6	Q06339	672 aa		3.21	□□□□□ -1.9
TRS20	YBR254C	GDH1	P07262	454 aa	Known RBP	3.2	□□□□□ -1.9
TRS20	YBR254C	CBS2	P14905	389 aa		3.2	□□□□□ -1.9
TRS20	YBR254C	LCB1	P25045	558 aa	Known RBP	3.2	□□□□□ -1.9
TRS20	YBR254C	UBA4	P38820	440 aa		3.2	□□□□□ -1.9
TRS20	YBR254C	ANS1	P38832	159 aa		3.2	□□□□□ -1.9
TRS20	YBR254C	SMC3	P47037	1230 aa		3.2	□□□□□ -1.9
TRS20	YBR254C	BOR1	P53838	576 aa		3.2	□□□□□ -1.9
TRS20	YBR254C	MSS11	Q03825	758 aa		3.2	□□□□□ -1.9
TRS20	YBR254C	HCR1	Q05775	265 aa	Known RBP	3.2	□□□□□ -1.9
TRS20	YBR254C	CSR1	Q06705	408 aa	Known RBP	3.2	□□□□□ -1.9
TRS20	YBR254C	YEH2	Q07950	538 aa		3.2	□□□□□ -1.9
TRS20	YBR254C	PSK2	Q08217	1101 aa		3.2	□□□□□ -1.9
TRS20	YBR254C	RPL15A	P05748	204 aa	Known RBP	3.19	□□□□□ -1.9
TRS20	YBR254C	SNF3	P10870	884 aa		3.19	□□□□□ -1.9
TRS20	YBR254C	CDC15	P27636	974 aa		3.19	□□□□□ -1.9
TRS20	YBR254C	RAD16	P31244	790 aa		3.19	□□□□□ -1.9
TRS20	YBR254C	AGA1	P32323	725 aa		3.19	□□□□□ -1.9
TRS20	YBR254C	SEC24	P40482	926 aa	Known RBP	3.19	□□□□□ -1.9
TRS20	YBR254C	AXL1	P40851	1208 aa		3.19	□□□□□ -1.9
TRS20	YBR254C	IKS1	P47042	667 aa		3.19	□□□□□ -1.9
TRS20	YBR254C	YDL186W	P48568	277 aa		3.19	□□□□□ -1.9
TRS20	YBR254C	RRT6	P53117	311 aa	Predicted RBP	3.19	□□□□□ -1.9
TRS20	YBR254C	PAP2	P53632	584 aa	Known RBP	3.19	□□□□□ -1.9
TRS20	YBR254C	APL4	Q12028	832 aa		3.19	□□□□□ -1.9
TRS20	YBR254C	PDH1	Q12428	516 aa	Known RBP	3.19	□□□□□ -1.9
TRS20	YBR254C	REV1	P12689	985 aa		3.18	□□□□□ -1.9
TRS20	YBR254C	RRP3	P38712	501 aa	Known RBP	3.18	□□□□□ -1.9
TRS20	YBR254C	RPM2	Q02773	1202 aa		3.18	□□□□□ -1.9
TRS20	YBR254C	BLS1	Q06071	122 aa		3.18	□□□□□ -1.9
TRS20	YBR254C	INP53	Q12271	1107 aa		3.18	□□□□□ -1.9
TRS20	YBR254C	ARP6	Q12509	438 aa		3.18	□□□□□ -1.9
TRS20	YBR254C	YKL050C	P35736	922 aa		3.17	□□□□□ -1.9
TRS20	YBR254C	SNU114	P36048	1008 aa	Known RBP	3.17	□□□□□ -1.9
TRS20	YBR254C	IME4	P41833	600 aa		3.17	□□□□□ -1.9
TRS20	YBR254C	RPS10B	P46784	105 aa	Known RBP	3.17	□□□□□ -1.9
TRS20	YBR254C	ZDS2	P54786	942 aa		3.17	□□□□□ -1.9
TRS20	YBR254C	YLL056C	Q12177	298 aa		3.17	□□□□□ -1.9
TRS20	YBR254C	TYR1	P20049	452 aa		3.16	□□□□□ -1.9
TRS20	YBR254C	RPS2	P25443	254 aa	Known RBP	3.16	□□□□□ -1.9
TRS20	YBR254C	AGP2	P38090	596 aa		3.16	□□□□□ -1.9
TRS20	YBR254C	RPH1	P39956	796 aa		3.16	□□□□□ -1.9
TRS20	YBR254C	RPR2	P40571	144 aa		3.16	□□□□□ -1.9
TRS20	YBR254C	YJL213W	P40896	331 aa		3.16	□□□□□ -1.9
TRS20	YBR254C	YFR016C	P43597	1233 aa	Known RBP	3.16	□□□□□ -1.9
TRS20	YBR254C	VPS4	P52917	437 aa		3.16	□□□□□ -1.9
TRS20	YBR254C	YMR087W	Q04299	284 aa		3.16	□□□□□ -1.9
TRS20	YBR254C	DIC1	Q06143	298 aa		3.16	□□□□□ -1.9
TRS20	YBR254C	RPS10A	Q08745	105 aa	Predicted RBP	3.16	□□□□□ -1.9
TRS20	YBR254C	SET6	Q12529	373 aa		3.16	□□□□□ -1.9
TRS20	YBR254C	YBR085C-A	O43137	85 aa		3.15	□□□□□ -1.91
TRS20	YBR254C	MCK1	P21965	375 aa	Known RBP	3.15	□□□□□ -1.91
TRS20	YBR254C	UIP3	P39547	235 aa		3.15	□□□□□ -1.91
TRS20	YBR254C	SMK1	P41808	388 aa		3.15	□□□□□ -1.91
TRS20	YBR254C	SPG5	P42933	373 aa		3.15	□□□□□ -1.91
TRS20	YBR254C	RTT101	P47050	842 aa		3.15	□□□□□ -1.91
TRS20	YBR254C	COS10	P52924	374 aa		3.15	□□□□□ -1.91
TRS20	YBR254C	SAM50	P53969	484 aa		3.15	□□□□□ -1.91
TRS20	YBR254C	EMI2	Q04409	500 aa	Known RBP	3.15	□□□□□ -1.91
TRS20	YBR254C	SSK1	Q07084	712 aa		3.15	□□□□□ -1.91
TRS20	YBR254C	YLR302C	O13544	120 aa		3.14	□□□□□ -1.91
TRS20	YBR254C	SPE2	P21182	396 aa		3.14	□□□□□ -1.91
TRS20	YBR254C	SNC1	P31109	117 aa		3.14	□□□□□ -1.91
TRS20	YBR254C	NDC1	P32500	655 aa		3.14	□□□□□ -1.91
TRS20	YBR254C	TEF4	P36008	412 aa	Known RBP	3.14	□□□□□ -1.91
TRS20	YBR254C	ROT2	P38138	954 aa		3.14	□□□□□ -1.91
TRS20	YBR254C	PCA1	P38360	1216 aa		3.14	□□□□□ -1.91
TRS20	YBR254C	BNA1	P47096	177 aa		3.14	□□□□□ -1.91
TRS20	YBR254C	PYK2	P52489	506 aa	Known RBP	3.14	□□□□□ -1.91
TRS20	YBR254C	ERP1	Q05359	219 aa	Known RBP	3.14	□□□□□ -1.91
TRS20	YBR254C	THI20	Q08224	551 aa		3.14	□□□□□ -1.91
TRS20	YBR254C	TRM8	Q12009	286 aa		3.14	□□□□□ -1.91
TRS20	YBR254C	NUS1	Q12063	375 aa		3.14	□□□□□ -1.91
TRS20	YBR254C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
TRS20	YBR254C	SEC62	P21825	274 aa		3.13	□□□□□ -1.91
TRS20	YBR254C	SIP2	P34164	415 aa	Known RBP	3.13	□□□□□ -1.91
TRS20	YBR254C	ECM15	P35195	104 aa		3.13	□□□□□ -1.91
TRS20	YBR254C	TSC10	P38342	320 aa		3.13	□□□□□ -1.91
TRS20	YBR254C	BUR6	P40096	142 aa		3.13	□□□□□ -1.91
TRS20	YBR254C	YTA12	P40341	825 aa		3.13	□□□□□ -1.91
TRS20	YBR254C	YPI1	P43587	155 aa		3.13	□□□□□ -1.91
TRS20	YBR254C	UBX4	P54730	416 aa		3.13	□□□□□ -1.91
TRS20	YBR254C	CDC45	Q08032	650 aa		3.13	□□□□□ -1.91
TRS20	YBR254C	PUT2	P07275	575 aa		3.12	□□□□□ -1.91
TRS20	YBR254C	MTF1	P14908	341 aa	Known RBP	3.12	□□□□□ -1.91
TRS20	YBR254C	CMK1	P27466	446 aa	Known RBP	3.12	□□□□□ -1.91
TRS20	YBR254C	DBF20	P32328	564 aa		3.12	□□□□□ -1.91
TRS20	YBR254C	XRS2	P33301	854 aa		3.12	□□□□□ -1.91
TRS20	YBR254C	TIF3	P34167	436 aa	Known RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms