RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C TRM13Q12383 476 aa2.37□□□□□ -2.03
CLN3YAL040C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03 RIP-Chip
CLN3YAL040C YBL111CQ3E7Y5 667 aa2.37□□□□□ -2.03
CLN3YAL040C HSH49Q99181 213 aaPredicted RBP2.37□□□□□ -2.03
CLN3YAL040C BI3Q9ZZW7 517 aa2.37□□□□□ -2.03
CLN3YAL040C ARG4P04076 463 aaPredicted RBP2.36□□□□□ -2.03
CLN3YAL040C RAD1P06777 1100 aa2.36□□□□□ -2.03
CLN3YAL040C SNF1P06782 633 aaKnown RBP2.36□□□□□ -2.03
CLN3YAL040C RED1P14291 827 aa2.36□□□□□ -2.03
CLN3YAL040C MSS51P32335 436 aa2.36□□□□□ -2.03
CLN3YAL040C DPH2P32461 534 aa2.36□□□□□ -2.03
CLN3YAL040C GCG1P32656 232 aaKnown RBP2.36□□□□□ -2.03
CLN3YAL040C TYE7P33122 291 aaPredicted RBP2.36□□□□□ -2.03
CLN3YAL040C SLC1P33333 303 aa2.36□□□□□ -2.03
CLN3YAL040C DRE2P36152 348 aa2.36□□□□□ -2.03
CLN3YAL040C APM3P38153 483 aa2.36□□□□□ -2.03
CLN3YAL040C UBS1P38290 277 aa2.36□□□□□ -2.03
CLN3YAL040C PPE1P38796 400 aa2.36□□□□□ -2.03
CLN3YAL040C END3P39013 349 aa2.36□□□□□ -2.03
CLN3YAL040C TPA1P40032 644 aaKnown RBP2.36□□□□□ -2.03
CLN3YAL040C TMN3P40071 706 aa2.36□□□□□ -2.03
CLN3YAL040C FTR1P40088 404 aa2.36□□□□□ -2.03
CLN3YAL040C ELO3P40319 345 aa2.36□□□□□ -2.03
CLN3YAL040C PSF2P40359 213 aa2.36□□□□□ -2.03
CLN3YAL040C DPH1P40487 425 aaKnown RBP2.36□□□□□ -2.03
CLN3YAL040C VHR1P40522 640 aa2.36□□□□□ -2.03
CLN3YAL040C RMD8P43620 662 aa2.36□□□□□ -2.03
CLN3YAL040C ALY2P47029 1046 aa2.36□□□□□ -2.03
CLN3YAL040C RPC17P47076 161 aa2.36□□□□□ -2.03
CLN3YAL040C BNA2P47125 453 aa2.36□□□□□ -2.03
CLN3YAL040C ATP22P50273 684 aaPredicted RBP2.36□□□□□ -2.03
CLN3YAL040C PCL10P53124 433 aa2.36□□□□□ -2.03
CLN3YAL040C YGR111WP53265 400 aa2.36□□□□□ -2.03
CLN3YAL040C CPR6P53691 371 aaKnown RBP2.36□□□□□ -2.03
CLN3YAL040C NOG2P53742 486 aaKnown RBP2.36□□□□□ -2.03
CLN3YAL040C TIM10P87108 93 aa2.36□□□□□ -2.03
CLN3YAL040C CWC21Q03375 135 aaKnown RBP2.36□□□□□ -2.03
CLN3YAL040C UFO1Q04511 668 aa2.36□□□□□ -2.03
CLN3YAL040C ECI1Q05871 280 aa2.36□□□□□ -2.03
CLN3YAL040C ECM7Q06200 448 aa2.36□□□□□ -2.03
CLN3YAL040C FRE5Q08908 694 aa2.36□□□□□ -2.03
CLN3YAL040C PGC1Q08959 321 aa2.36□□□□□ -2.03
CLN3YAL040C ICL2Q12031 575 aa2.36□□□□□ -2.03
CLN3YAL040C AIM41Q12032 185 aa2.36□□□□□ -2.03
CLN3YAL040C NUR1Q12066 484 aa2.36□□□□□ -2.03
CLN3YAL040C HSP42Q12329 375 aa2.36□□□□□ -2.03
CLN3YAL040C EMP46Q12396 444 aa2.36□□□□□ -2.03
CLN3YAL040C GIS3Q12418 502 aa2.36□□□□□ -2.03
CLN3YAL040C ZRT2Q12436 422 aa2.36□□□□□ -2.03
CLN3YAL040C RPS21BQ3E754 87 aaKnown RBP2.36□□□□□ -2.03
CLN3YAL040C CHS1P08004 1131 aa2.35□□□□□ -2.03
CLN3YAL040C NAT1P12945 854 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C SAT4P25333 603 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C CYS3P31373 394 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C DBF4P32325 704 aa2.35□□□□□ -2.03
CLN3YAL040C RME1P32338 300 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C HXT3P32466 567 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C RPD3P32561 433 aa2.35□□□□□ -2.03
CLN3YAL040C RRP1P35178 278 aaPredicted RBP2.35□□□□□ -2.03
CLN3YAL040C SDS22P36047 338 aa2.35□□□□□ -2.03
CLN3YAL040C BYE1P36106 594 aa2.35□□□□□ -2.03
CLN3YAL040C HEL1P36113 551 aa2.35□□□□□ -2.03
CLN3YAL040C MSG5P38590 489 aa2.35□□□□□ -2.03
CLN3YAL040C UTP9P38882 575 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C AXL2P38928 823 aa2.35□□□□□ -2.03
CLN3YAL040C AVT2P39981 480 aa2.35□□□□□ -2.03
CLN3YAL040C YER010CP40011 234 aa2.35□□□□□ -2.03
CLN3YAL040C LSM5P40089 93 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C YER186CP40101 306 aa2.35□□□□□ -2.03
CLN3YAL040C KHA1P40309 873 aa2.35□□□□□ -2.03
CLN3YAL040C SET2P46995 733 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C BFA1P47113 574 aa2.35□□□□□ -2.03
CLN3YAL040C AZR1P50080 613 aa2.35□□□□□ -2.03
CLN3YAL040C SHE10P53075 577 aa2.35□□□□□ -2.03
CLN3YAL040C JJJ1P53863 590 aa2.35□□□□□ -2.03
CLN3YAL040C ALG11P53954 548 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C SLG1P54867 378 aa2.35□□□□□ -2.03
CLN3YAL040C GPD1Q00055 391 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C MRPL13Q02204 264 aa2.35□□□□□ -2.03
CLN3YAL040C YKR011CQ02209 353 aa2.35□□□□□ -2.03
CLN3YAL040C LGE1Q02796 332 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C ELP3Q02908 557 aaKnown RBP2.35□□□□□ -2.03
CLN3YAL040C YDR286CQ05530 114 aa2.35□□□□□ -2.03
CLN3YAL040C YOR022CQ12204 715 aa2.35□□□□□ -2.03
CLN3YAL040C CTF3Q12748 733 aa2.35□□□□□ -2.03
CLN3YAL040C RPS9AO13516 197 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C CDC8P00572 216 aa2.34□□□□□ -2.03
CLN3YAL040C RPS3P05750 240 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C RPB2P08518 1224 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C ILS1P09436 1072 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C PYC1P11154 1178 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C SNA3P14359 133 aa2.34□□□□□ -2.03
CLN3YAL040C GUK1P15454 187 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C PDX1P16451 410 aa2.34□□□□□ -2.03
CLN3YAL040C NCP1P16603 691 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C OLE1P21147 510 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C ATP12P22135 325 aa2.34□□□□□ -2.03
CLN3YAL040C POT1P27796 417 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
CLN3YAL040C EFB1P32471 206 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C SKG6P32900 734 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms