RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 IDP3P53982 420 aaKnown RBP8.61□□□□□ -1.03
NME1NME1 DPB4Q04603 196 aaKnown RBP8.61□□□□□ -1.03
NME1NME1 PFA4Q12006 378 aa8.61□□□□□ -1.03
NME1NME1 PGK1P00560 416 aaKnown RBP8.6□□□□□ -1.03
NME1NME1 DFR1P07807 211 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
NME1NME1 STE50P25344 346 aa8.6□□□□□ -1.03
NME1NME1 CUE2P36075 443 aaKnown RBP8.6□□□□□ -1.03
NME1NME1 UTP21Q06078 939 aaPredicted RBP8.6□□□□□ -1.03
NME1NME1 YOL159CQ08300 171 aa8.6□□□□□ -1.03
NME1NME1 MET17P06106 444 aa8.59□□□□□ -1.03
NME1NME1 EST1P17214 699 aaPredicted RBP8.59□□□□□ -1.03
NME1NME1 SSE2P32590 693 aaKnown RBP8.59□□□□□ -1.03
NME1NME1 GIR2Q03768 265 aaPredicted RBP8.59□□□□□ -1.03
NME1NME1 SWF1Q04629 336 aa8.59□□□□□ -1.03
NME1NME1 NDJ1Q12366 352 aa8.59□□□□□ -1.03
NME1NME1 SEF1P34228 1148 aa8.58□□□□□ -1.04
NME1NME1 MAF1P41910 395 aa8.58□□□□□ -1.04
NME1NME1 YTP1P53584 459 aa8.58□□□□□ -1.04
NME1NME1 ERG13P54839 491 aaKnown RBP8.58□□□□□ -1.04
NME1NME1 RSC9Q03124 581 aa8.58□□□□□ -1.04
NME1NME1 VPS38Q05919 439 aa8.58□□□□□ -1.04
NME1NME1 YNL162W-AQ3E7A8 72 aa8.58□□□□□ -1.04
NME1NME1 KRS1P15180 591 aaKnown RBP8.57□□□□□ -1.04
NME1NME1 DOT5P40553 215 aa8.57□□□□□ -1.04
NME1NME1 PTR3P43606 678 aa8.57□□□□□ -1.04
NME1NME1 COQ11Q05892 277 aa8.57□□□□□ -1.04
NME1NME1 RRG1Q12167 365 aaPredicted RBP8.57□□□□□ -1.04
NME1NME1 YMR085WP0CF18 432 aa8.56□□□□□ -1.04
NME1NME1 CLB2P24869 491 aa8.56□□□□□ -1.04
NME1NME1 ROX1P25042 368 aa8.56□□□□□ -1.04
NME1NME1 IMG1P25626 169 aa8.56□□□□□ -1.04
NME1NME1 NPL6P32832 435 aa8.56□□□□□ -1.04
NME1NME1 YBR144CP34215 104 aa8.56□□□□□ -1.04
NME1NME1 TSC10P38342 320 aa8.56□□□□□ -1.04
NME1NME1 DBP8P38719 431 aa8.56□□□□□ -1.04
NME1NME1 YEL057CP39983 233 aa8.56□□□□□ -1.04
NME1NME1 MET28P40573 187 aa8.56□□□□□ -1.04
NME1NME1 SEG1Q04279 960 aa8.56□□□□□ -1.04
NME1NME1 EMI2Q04409 500 aaKnown RBP8.56□□□□□ -1.04
NME1NME1 FRE3Q08905 711 aa8.56□□□□□ -1.04
NME1NME1 SFI1Q12369 946 aa8.56□□□□□ -1.04
NME1NME1 RRI1Q12468 440 aa8.56□□□□□ -1.04
NME1NME1 AVL9Q12500 764 aa8.56□□□□□ -1.04
NME1NME1 PUP3P25451 205 aaKnown RBP8.55□□□□□ -1.04
NME1NME1 UBP11P36026 717 aa8.55□□□□□ -1.04
NME1NME1 ALG5P40350 334 aa8.55□□□□□ -1.04
NME1NME1 EAF7P53911 425 aaKnown RBP8.55□□□□□ -1.04
NME1NME1 TEN1Q07921 160 aa8.55□□□□□ -1.04
NME1NME1 ETT1Q08421 412 aaKnown RBP8.55□□□□□ -1.04
NME1NME1 SGS1P35187 1447 aa8.54□□□□□ -1.04
NME1NME1 KGD1P20967 1014 aaKnown RBP8.54□□□□□ -1.04
NME1NME1 CNA1P23287 553 aa8.54□□□□□ -1.04
NME1NME1 ICS2P38284 255 aa8.54□□□□□ -1.04
NME1NME1 ATF1P40353 525 aa8.54□□□□□ -1.04
NME1NME1 SGN1P40561 250 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
NME1NME1 YNL144CP53907 740 aa8.54□□□□□ -1.04
NME1NME1 ASI1P54074 624 aa8.54□□□□□ -1.04
NME1NME1 GRC3Q07845 632 aa8.54□□□□□ -1.04
NME1NME1 MIA40P36046 403 aa8.53□□□□□ -1.04
NME1NME1 VPS41P38959 992 aa8.53□□□□□ -1.04
NME1NME1 ROK1P45818 564 aaPredicted RBP8.53□□□□□ -1.04
NME1NME1 ERG26P53199 349 aaKnown RBP8.53□□□□□ -1.04
NME1NME1 COP1P53622 1201 aaKnown RBP8.53□□□□□ -1.04
NME1NME1 BOP3P53958 396 aa8.53□□□□□ -1.04
NME1NME1 THI7Q05998 598 aa8.53□□□□□ -1.04
NME1NME1 RIM20Q12033 661 aa8.53□□□□□ -1.04
NME1NME1 RTN2Q12443 393 aa8.53□□□□□ -1.04
NME1NME1 GAL80P04387 435 aa8.52□□□□□ -1.05
NME1NME1 ARG81P05085 880 aa8.52□□□□□ -1.05
NME1NME1 BOS1P25385 244 aa8.52□□□□□ -1.05
NME1NME1 TCD2P36101 447 aaKnown RBP8.52□□□□□ -1.05
NME1NME1 MUM2P38236 366 aa8.52□□□□□ -1.05
NME1NME1 APT1P49435 187 aaKnown RBP8.52□□□□□ -1.05
NME1NME1 IPI3P53877 555 aa8.52□□□□□ -1.05
NME1NME1 RIM13Q03792 727 aa8.52□□□□□ -1.05
NME1NME1 ECM30Q06673 1274 aa8.52□□□□□ -1.05
NME1NME1 RTT109Q07794 436 aa8.52□□□□□ -1.05
NME1NME1 PDA1P16387 420 aaKnown RBP8.51□□□□□ -1.05
NME1NME1 SYN8P31377 255 aa8.51□□□□□ -1.05
NME1NME1 ERG3P32353 365 aa8.51□□□□□ -1.05
NME1NME1 YBL055CP34220 418 aaPredicted RBP8.51□□□□□ -1.05
NME1NME1 RFC1P38630 861 aaKnown RBP8.51□□□□□ -1.05
NME1NME1 ANS1P38832 159 aa8.51□□□□□ -1.05
NME1NME1 MET18P40469 1032 aa8.51□□□□□ -1.05
NME1NME1 IMD4P50094 524 aaKnown RBP8.51□□□□□ -1.05
NME1NME1 ECM22Q05958 814 aaPredicted RBP8.51□□□□□ -1.05
NME1NME1 CRC1Q12289 327 aa8.51□□□□□ -1.05
NME1NME1 GAL4P04386 881 aa8.5□□□□□ -1.05
NME1NME1 TIF3P34167 436 aaKnown RBP8.5□□□□□ -1.05
NME1NME1 NUP133P36161 1157 aa8.5□□□□□ -1.05
NME1NME1 STV1P37296 890 aa8.5□□□□□ -1.05
NME1NME1 VID24P38263 362 aa8.5□□□□□ -1.05
NME1NME1 ULP2P40537 1034 aaPredicted RBP8.5□□□□□ -1.05
NME1NME1 LYS20P48570 428 aaKnown RBP8.5□□□□□ -1.05
NME1NME1 VTC3Q02725 835 aa8.5□□□□□ -1.05
NME1NME1 YDR239CQ03780 787 aa8.5□□□□□ -1.05
NME1NME1 MRP13P12686 339 aa8.49□□□□□ -1.05
NME1NME1 ART10P18634 518 aaKnown RBP8.49□□□□□ -1.05
NME1NME1 YKL100CP34248 587 aa8.49□□□□□ -1.05
NME1NME1 CST26P38226 397 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms