RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ESYT1Q9BSJ8 1104 aa21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 TRAIPQ9BWF2 469 aa21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 SESN1Q9Y6P5 492 aa21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 POLR2DO15514 142 aaKnown RBP21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 TRIM27P14373 513 aa21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 DCTN3O75935 186 aa21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 IL15P40933 162 aaPredicted RBP21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 MKL2Q9ULH7 1088 aa21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 MYH8P13535 1937 aa21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 TRIM11Q96F44 468 aa21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 DACH2Q96NX9 599 aa21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 KCNH3Q9ULD8 1083 aa21.09■□□□□ 0.97
CACNA1A-257ENST00000638009 RRS1Q15050 365 aaKnown RBP21.08■□□□□ 0.97
CACNA1A-257ENST00000638009 MRPS26Q9BYN8 205 aaKnown RBP21.08■□□□□ 0.97
CACNA1A-257ENST00000638009 USTQ9Y2C2 406 aa21.08■□□□□ 0.97
CACNA1A-257ENST00000638009 OLA1Q9NTK5 396 aaKnown RBP21.08■□□□□ 0.97
CACNA1A-257ENST00000638009 NCAPH2Q6IBW4 605 aa21.08■□□□□ 0.97
CACNA1A-257ENST00000638009 KLHL7Q8IXQ5 586 aa21.08■□□□□ 0.97
CACNA1A-257ENST00000638009 KIF17Q9P2E2 1029 aa21.08■□□□□ 0.97
CACNA1A-257ENST00000638009 SPDYE2BA6NHP3 402 aa21.08■□□□□ 0.96
CACNA1A-257ENST00000638009 SPDYE6P0CI01 402 aa21.08■□□□□ 0.96
CACNA1A-257ENST00000638009 KDM1AO60341 852 aa21.08■□□□□ 0.96
CACNA1A-257ENST00000638009 ARHGAP18Q8N392 663 aa21.08■□□□□ 0.96
CACNA1A-257ENST00000638009 PRR23D1E9PI22 279 aaPredicted RBP21.08■□□□□ 0.96
CACNA1A-257ENST00000638009 PRR23D2P0DMB1 279 aaPredicted RBP21.08■□□□□ 0.96
CACNA1A-257ENST00000638009 CARD6Q9BX69 1037 aa21.08■□□□□ 0.96
CACNA1A-257ENST00000638009 STX18Q9P2W9 335 aaKnown RBP21.08■□□□□ 0.96
CACNA1A-257ENST00000638009 ZBTB21Q9ULJ3 1066 aa21.08■□□□□ 0.96
CACNA1A-257ENST00000638009 CAPN11Q9UMQ6 739 aa21.08■□□□□ 0.96
CACNA1A-257ENST00000638009 HSPA6P17066 643 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 PSMA3P25788 255 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 STMN3Q9NZ72 180 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 RASSF10A6NK89 507 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 AZI2Q9H6S1 392 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 CARSP49589 748 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 PPP2R5AQ15172 486 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 CALCRLQ16602 461 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 ATP8B1O43520 1251 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 KLHL29Q96CT2 875 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 SNX5Q9Y5X3 404 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 KIF1BO60333 1816 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 ARHGAP45Q92619 1136 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 ACTN1P12814 892 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 PSMA4P25789 261 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 SMCO2A6NFE2 343 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 MAGEA1P43355 309 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 RCN2Q14257 317 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 ZC3H12BQ5HYM0 836 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 SETDB2Q96T68 719 aa21.07■□□□□ 0.96
CACNA1A-257ENST00000638009 A6NJR5 290 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 PHF21AQ96BD5 680 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 IBTKQ9P2D0 1353 aaPredicted RBP21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 TRPA1O75762 1119 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 SESTD1Q86VW0 696 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 NAF1Q96HR8 494 aaKnown RBP21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 HLA-DPA1P20036 260 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 FAM96AQ9H5X1 160 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 H0Y626 953 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 HNRNPRO43390 633 aaKnown RBP21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 TRIM16O95361 564 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 IGBP1P78318 339 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 VPS16Q9H269 839 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 EPAS1Q99814 870 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 KRT75O95678 551 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 POSTNQ15063 836 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 ATP6V1E2Q96A05 226 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 ZNF233A6NK53 670 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 CATSPER1Q8NEC5 780 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 MYO1AQ9UBC5 1043 aa21.06■□□□□ 0.96
CACNA1A-257ENST00000638009 SLC38A10Q9HBR0 1119 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 MAPK13O15264 365 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 PTPREP23469 700 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 PDE6CP51160 858 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 POLE2P56282 527 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 DAB2P98082 770 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 TRMT10CQ7L0Y3 403 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 SFMBT1Q9UHJ3 866 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 WBP4O75554 376 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 COG4Q9H9E3 785 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 FANCCQ00597 558 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 GJC2Q5T442 439 aaPredicted RBP21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 DHX38Q92620 1227 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 SAAL1Q96ER3 474 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 NDE1Q9NXR1 346 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 CEP70Q8NHQ1 597 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 TMEM87BQ96K49 555 aa21.05■□□□□ 0.96
CACNA1A-257ENST00000638009 KDM2BQ8NHM5 1336 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 NAIPQ13075 1403 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 SDSP20132 328 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 SOS2Q07890 1332 aaPredicted RBP21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 BEND3Q5T5X7 828 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 PLEKHM3Q6ZWE6 761 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 ASPSCR1Q9BZE9 553 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 MEIS1O00470 390 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 IFT88Q13099 833 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 MCM9Q9NXL9 1143 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 MMEP08473 750 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 SH3GL3Q99963 347 aa21.04■□□□□ 0.96
CACNA1A-257ENST00000638009 SNRPA1P09661 255 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms