RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 GTPBP6O43824 516 aaPredicted RBP9.71□□□□□ -0.85
PDE6A-204ENST00000613228 ORC4O43929 436 aa9.71□□□□□ -0.85
PDE6A-204ENST00000613228 NEK11Q8NG66 645 aa9.71□□□□□ -0.85
PDE6A-204ENST00000613228 SRP68Q9UHB9 627 aaKnown RBP9.71□□□□□ -0.85
PDE6A-204ENST00000613228 KCNJ14Q9UNX9 436 aa9.71□□□□□ -0.85
PDE6A-204ENST00000613228 ADAMTSL3P82987 1691 aa9.71□□□□□ -0.85
PDE6A-204ENST00000613228 IRX1P78414 480 aaPredicted RBP9.71□□□□□ -0.86
PDE6A-204ENST00000613228 NEDD9Q14511 834 aa9.71□□□□□ -0.86
PDE6A-204ENST00000613228 GOLGA1Q92805 767 aa9.71□□□□□ -0.86
PDE6A-204ENST00000613228 ARHGEF1Q92888 912 aaKnown RBP9.71□□□□□ -0.86
PDE6A-204ENST00000613228 CTNND2Q9UQB3 1225 aa9.71□□□□□ -0.86
PDE6A-204ENST00000613228 A6NNZ2 444 aa9.71□□□□□ -0.86
PDE6A-204ENST00000613228 ARHGAP25P42331 645 aa9.71□□□□□ -0.86
PDE6A-204ENST00000613228 HNRNPH2P55795 449 aaKnown RBP9.71□□□□□ -0.86
PDE6A-204ENST00000613228 UBXN1Q04323 297 aa9.71□□□□□ -0.86
PDE6A-204ENST00000613228 TUBB8Q3ZCM7 444 aa9.71□□□□□ -0.86
PDE6A-204ENST00000613228 MMS22LQ6ZRQ5 1243 aa9.71□□□□□ -0.86
PDE6A-204ENST00000613228 PCDHA7Q9UN72 937 aa9.71□□□□□ -0.86
PDE6A-204ENST00000613228 KLRF2D3W0D1 207 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 NTSR2O95665 410 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 OR52Z1P0C646 297 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 MAGEA9P43362 315 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 PDE4DQ08499 809 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 DBN1Q16643 649 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 ISM2Q6H9L7 571 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 EPB41P11171 864 aaKnown RBP9.7□□□□□ -0.86
PDE6A-204ENST00000613228 FANCCQ00597 558 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 FOXP4Q8IVH2 680 aaPredicted RBP9.7□□□□□ -0.86
PDE6A-204ENST00000613228 MARCH10Q8NA82 808 aaPredicted RBP9.7□□□□□ -0.86
PDE6A-204ENST00000613228 KANSL2Q9H9L4 492 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.7□□□□□ -0.86
PDE6A-204ENST00000613228 ATP8B1O43520 1251 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 KRT86O43790 486 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 SEPT14Q6ZU15 432 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 CCDC121Q6ZUS5 278 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 KRT26Q7Z3Y9 468 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 SLC17A8Q8NDX2 589 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 DCAF4Q8WV16 495 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 CPLX3Q8WVH0 158 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 MRFAP1L1Q96HT8 127 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 MROH7-TTC4A0A0A0MT08 1334 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 PDS5AQ29RF7 1337 aaKnown RBP9.7□□□□□ -0.86
PDE6A-204ENST00000613228 OTUD7BQ6GQQ9 843 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 SGMS1Q86VZ5 419 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 BCL9O00512 1426 aa9.7□□□□□ -0.86
PDE6A-204ENST00000613228 USP17L3A6NCW0 530 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 USP17L4A6NCW7 530 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 STX10O60499 249 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 TACC1O75410 805 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 ADD1P35611 737 aaKnown RBP9.69□□□□□ -0.86
PDE6A-204ENST00000613228 USP14P54578 494 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 CYP26C1Q6V0L0 522 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 USP17L1Q7RTZ2 530 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 TSC1Q92574 1164 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 SCLT1Q96NL6 688 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.69□□□□□ -0.86
PDE6A-204ENST00000613228 MYO1CO00159 1063 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 IKBKBO14920 756 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 ZBTB22O15209 634 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 RAD51AP2Q09MP3 1159 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 ELF2Q15723 593 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 TCERG1LQ5VWI1 586 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 ARL6IP4Q66PJ3 421 aaKnown RBP9.69□□□□□ -0.86
PDE6A-204ENST00000613228 ZNF579Q8NAF0 562 aaKnown RBP9.69□□□□□ -0.86
PDE6A-204ENST00000613228 TDRD7Q8NHU6 1098 aaKnown RBP9.69□□□□□ -0.86
PDE6A-204ENST00000613228 DDX12PQ92771 950 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 DNM3Q9UQ16 869 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 LUC7L2Q9Y383 392 aaKnown RBP9.69□□□□□ -0.86
PDE6A-204ENST00000613228 PARP4Q9UKK3 1724 aaKnown RBP9.69□□□□□ -0.86
PDE6A-204ENST00000613228 H7C1D1 291 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 DYNLL1P63167 89 aaKnown RBP9.69□□□□□ -0.86
PDE6A-204ENST00000613228 ICA1Q05084 483 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 SEPT2Q15019 361 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 ABCB5Q2M3G0 1257 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 CCDC38Q502W7 563 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 PODNQ7Z5L7 613 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 NLRX1Q86UT6 975 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 SNX29Q8TEQ0 813 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 SBK1Q52WX2 424 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 SLC10A5Q5PT55 438 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 PLVAPQ9BX97 442 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 PSTPIP2Q9H939 334 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 LMO7Q8WWI1 1683 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 EXOSC10Q01780 885 aaKnown RBP9.69□□□□□ -0.86
PDE6A-204ENST00000613228 LINC00301Q8NCQ3 95 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 AFAP1L1Q8TED9 768 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 BICD1Q96G01 975 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 BAG1Q99933 345 aaPredicted RBP9.69□□□□□ -0.86
PDE6A-204ENST00000613228 TCHPQ9BT92 498 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 CXorf56Q9H5V9 222 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 ZSWIM5Q9P217 1185 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 FRMD4BQ9Y2L6 1034 aa9.69□□□□□ -0.86
PDE6A-204ENST00000613228 SALL3Q9BXA9 1300 aa9.68□□□□□ -0.86
PDE6A-204ENST00000613228 ERCC5P28715 1186 aaPredicted RBP9.68□□□□□ -0.86
PDE6A-204ENST00000613228 SMTNP53814 917 aa9.68□□□□□ -0.86
PDE6A-204ENST00000613228 CCDC24Q8N4L8 307 aa9.68□□□□□ -0.86
PDE6A-204ENST00000613228 GSDMAQ96QA5 445 aa9.68□□□□□ -0.86
PDE6A-204ENST00000613228 IWS1Q96ST2 819 aa9.68□□□□□ -0.86
PDE6A-204ENST00000613228 KIF2CQ99661 725 aa9.68□□□□□ -0.86
PDE6A-204ENST00000613228 SH3GL3Q99963 347 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms