RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 ZMYM1Q5SVZ6 1142 aa17.57■□□□□ 0.4
FDPS-221ENST00000612683 ANKRD45Q5TZF3 282 aa17.57■□□□□ 0.4
FDPS-221ENST00000612683 GPR153Q6NV75 609 aa17.57■□□□□ 0.4
FDPS-221ENST00000612683 XPNPEP3Q9NQH7 507 aa17.57■□□□□ 0.4
FDPS-221ENST00000612683 NRBP1Q9UHY1 535 aa17.57■□□□□ 0.4
FDPS-221ENST00000612683 RIPK3Q9Y572 518 aa17.57■□□□□ 0.4
FDPS-221ENST00000612683 TAL1P17542 331 aaPredicted RBP17.56■□□□□ 0.4
FDPS-221ENST00000612683 TFAP4Q01664 338 aa17.56■□□□□ 0.4
FDPS-221ENST00000612683 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
FDPS-221ENST00000612683 DEFB123Q8N688 67 aa17.56■□□□□ 0.4
FDPS-221ENST00000612683 NEDD1Q8NHV4 660 aa17.56■□□□□ 0.4
FDPS-221ENST00000612683 RAVER2Q9HCJ3 691 aaKnown RBP17.56■□□□□ 0.4
FDPS-221ENST00000612683 FEM1BQ9UK73 627 aa17.56■□□□□ 0.4
FDPS-221ENST00000612683 ISY1Q9ULR0 285 aaKnown RBP17.56■□□□□ 0.4
FDPS-221ENST00000612683 CNPY2Q9Y2B0 182 aa17.56■□□□□ 0.4
FDPS-221ENST00000612683 GREB1LQ9C091 1923 aaPredicted RBP17.56■□□□□ 0.4
FDPS-221ENST00000612683 MYH4Q9Y623 1939 aa17.55■□□□□ 0.4
FDPS-221ENST00000612683 PGK1P00558 417 aa17.55■□□□□ 0.4
FDPS-221ENST00000612683 RRP1P56182 461 aaKnown RBP17.55■□□□□ 0.4
FDPS-221ENST00000612683 PPARAQ07869 468 aa17.55■□□□□ 0.4
FDPS-221ENST00000612683 SLFN13Q68D06 897 aa17.55■□□□□ 0.4
FDPS-221ENST00000612683 Q7L0L9 218 aa17.55■□□□□ 0.4
FDPS-221ENST00000612683 RNF180Q86T96 592 aa17.55■□□□□ 0.4
FDPS-221ENST00000612683 PRDM5Q9NQX1 630 aaPredicted RBP17.55■□□□□ 0.4
FDPS-221ENST00000612683 ATP2A1O14983 1001 aa17.54■□□□□ 0.4
FDPS-221ENST00000612683 ZNF865P0CJ78 1059 aaPredicted RBP17.54■□□□□ 0.4
FDPS-221ENST00000612683 BMP3P12645 472 aa17.54■□□□□ 0.4
FDPS-221ENST00000612683 AKR1A1P14550 325 aa17.54■□□□□ 0.4
FDPS-221ENST00000612683 TRIM60Q495X7 471 aa17.54■□□□□ 0.4
FDPS-221ENST00000612683 CCDC129Q6ZRS4 1044 aa17.54■□□□□ 0.4
FDPS-221ENST00000612683 GMCL1P1Q8NEA9 526 aa17.54■□□□□ 0.4
FDPS-221ENST00000612683 CHMP4CQ96CF2 233 aa17.54■□□□□ 0.4
FDPS-221ENST00000612683 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
FDPS-221ENST00000612683 SYNPO2Q9UMS6 1093 aa17.54■□□□□ 0.4
FDPS-221ENST00000612683 PLXNA1Q9UIW2 1896 aa17.54■□□□□ 0.4
FDPS-221ENST00000612683 TMEM232C9JQI7 657 aa17.53■□□□□ 0.4
FDPS-221ENST00000612683 ANKRD35Q8N283 1001 aa17.53■□□□□ 0.4
FDPS-221ENST00000612683 MSL3Q8N5Y2 521 aaKnown RBP17.53■□□□□ 0.4
FDPS-221ENST00000612683 SLC17A8Q8NDX2 589 aa17.53■□□□□ 0.4
FDPS-221ENST00000612683 SLC38A10Q9HBR0 1119 aa17.53■□□□□ 0.4
FDPS-221ENST00000612683 FAM184BQ9ULE4 1060 aa17.53■□□□□ 0.4
FDPS-221ENST00000612683 DNAJC25-GNG10A0A024R161 153 aa17.52■□□□□ 0.4
FDPS-221ENST00000612683 SNAI1O95863 264 aaPredicted RBP17.52■□□□□ 0.4
FDPS-221ENST00000612683 CTDSPL2Q05D32 466 aa17.52■□□□□ 0.4
FDPS-221ENST00000612683 IKQ13123 557 aaPredicted RBP17.52■□□□□ 0.4
FDPS-221ENST00000612683 SNX17Q15036 470 aa17.52■□□□□ 0.4
FDPS-221ENST00000612683 CHST13Q8NET6 341 aa17.52■□□□□ 0.4
FDPS-221ENST00000612683 CHURC1Q8WUH1 139 aa17.52■□□□□ 0.4
FDPS-221ENST00000612683 EVI5LQ96CN4 794 aa17.52■□□□□ 0.4
FDPS-221ENST00000612683 INCENPQ9NQS7 918 aa17.52■□□□□ 0.4
FDPS-221ENST00000612683 FBXO40Q9UH90 709 aa17.52■□□□□ 0.4
FDPS-221ENST00000612683 PHF24Q9UPV7 400 aa17.52■□□□□ 0.4
FDPS-221ENST00000612683 TSPY2A6NKD2 308 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 FDX1P10109 184 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 MCCP23508 829 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 SLC1A4P43007 532 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 TLE2Q04725 743 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 PPP4R3BQ5MIZ7 849 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 C1orf53Q5VUE5 145 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 MAMDC4Q6UXC1 1216 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 DNAH12Q6ZR08 3092 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 SH3RF1Q7Z6J0 888 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 BADQ92934 168 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 LENG1Q96BZ8 264 aaPredicted RBP17.51■□□□□ 0.39
FDPS-221ENST00000612683 ZHX1Q9UKY1 873 aaPredicted RBP17.51■□□□□ 0.39
FDPS-221ENST00000612683 STX8Q9UNK0 236 aa17.51■□□□□ 0.39
FDPS-221ENST00000612683 SYNGAP1Q96PV0 1343 aa17.5■□□□□ 0.39
FDPS-221ENST00000612683 SALL3Q9BXA9 1300 aa17.5■□□□□ 0.39
FDPS-221ENST00000612683 STAT2P52630 851 aa17.5■□□□□ 0.39
FDPS-221ENST00000612683 OAZ1P54368 228 aa17.5■□□□□ 0.39
FDPS-221ENST00000612683 ZNF467Q7Z7K2 595 aaPredicted RBP17.5■□□□□ 0.39
FDPS-221ENST00000612683 FAM160B2Q86V87 743 aa17.5■□□□□ 0.39
FDPS-221ENST00000612683 STAG1Q8WVM7 1258 aa17.5■□□□□ 0.39
FDPS-221ENST00000612683 HOMER2Q9NSB8 354 aa17.5■□□□□ 0.39
FDPS-221ENST00000612683 MTMR10Q9NXD2 777 aa17.5■□□□□ 0.39
FDPS-221ENST00000612683 TACC3Q9Y6A5 838 aa17.5■□□□□ 0.39
FDPS-221ENST00000612683 TRIM43BA6NCK2 446 aa17.49■□□□□ 0.39
FDPS-221ENST00000612683 RANBP6O60518 1105 aaKnown RBP17.49■□□□□ 0.39
FDPS-221ENST00000612683 PDE1AP54750 535 aa17.49■□□□□ 0.39
FDPS-221ENST00000612683 ACVR2BQ13705 512 aa17.49■□□□□ 0.39
FDPS-221ENST00000612683 VPS53Q5VIR6 699 aa17.49■□□□□ 0.39
FDPS-221ENST00000612683 TRIM43Q96BQ3 446 aaPredicted RBP17.49■□□□□ 0.39
FDPS-221ENST00000612683 TSEN34Q9BSV6 310 aaKnown RBP17.49■□□□□ 0.39
FDPS-221ENST00000612683 PDLIM7Q9NR12 457 aa17.49■□□□□ 0.39
FDPS-221ENST00000612683 HELLSQ9NRZ9 838 aa17.49■□□□□ 0.39
FDPS-221ENST00000612683 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.49■□□□□ 0.39
FDPS-221ENST00000612683 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
FDPS-221ENST00000612683 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.49■□□□□ 0.39
FDPS-221ENST00000612683 LAMA3Q16787 3333 aa17.49■□□□□ 0.39
FDPS-221ENST00000612683 PLIN4Q96Q06 1357 aa17.49■□□□□ 0.39
FDPS-221ENST00000612683 A0A1W2PQ45 241 aaPredicted RBP17.48■□□□□ 0.39
FDPS-221ENST00000612683 A0A1W2PQY0 241 aa17.48■□□□□ 0.39
FDPS-221ENST00000612683 FOXP2O15409 715 aa17.48■□□□□ 0.39
FDPS-221ENST00000612683 NMT2O60551 498 aa17.48■□□□□ 0.39
FDPS-221ENST00000612683 ADAMTS4O75173 837 aa17.48■□□□□ 0.39
FDPS-221ENST00000612683 HDAC1Q13547 482 aaPredicted RBP17.48■□□□□ 0.39
FDPS-221ENST00000612683 SHHQ15465 462 aa17.48■□□□□ 0.39
FDPS-221ENST00000612683 KCNA10Q16322 511 aa17.48■□□□□ 0.39
FDPS-221ENST00000612683 RCSD1Q6JBY9 416 aa17.48■□□□□ 0.39
FDPS-221ENST00000612683 KCTD1Q719H9 257 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms