RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 TUBBP07437 444 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 VEGFAP15692 232 aaPredicted RBP12.35□□□□□ -0.43
CDH4-202ENST00000611855 CXCR5P32302 372 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 AARSP49588 968 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDH4-202ENST00000611855 DNA2P51530 1060 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 TUBB4BP68371 445 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 PAK1Q13153 545 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 TRAPPC11Q7Z392 1133 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
CDH4-202ENST00000611855 AATFQ9NY61 560 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDH4-202ENST00000611855 STK36Q9NRP7 1315 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 PMS1P54277 932 aaKnown RBP12.35□□□□□ -0.43
CDH4-202ENST00000611855 MSL3Q8N5Y2 521 aaKnown RBP12.35□□□□□ -0.43
CDH4-202ENST00000611855 ISCA1Q9BUE6 129 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 AGPAT5Q9NUQ2 364 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDH4-202ENST00000611855 NF2P35240 595 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 KRT2P35908 639 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 PRCPP42785 496 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 RASGRF1Q13972 1273 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 PIK3AP1Q6ZUJ8 805 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 GSDMAQ96QA5 445 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 VIPAS39Q9H9C1 493 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 ANKRD18BA2A2Z9 1011 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 NEBLO76041 1014 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 KRT26Q7Z3Y9 468 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 DNAJC10Q8IXB1 793 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 ARL8AQ96BM9 186 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 MTMR7Q9Y216 660 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 LUC7L2Q9Y383 392 aaKnown RBP12.34□□□□□ -0.43
CDH4-202ENST00000611855 TNKSO95271 1327 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 PP2D1A8MPX8 630 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 IDEP14735 1019 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 EVX2Q03828 476 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 TTC38Q5R3I4 469 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 SH3RF1Q7Z6J0 888 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 SPATA5Q8NB90 893 aa12.34□□□□□ -0.43
CDH4-202ENST00000611855 B4DLN1 442 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 PDE8BO95263 885 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 PARP1P09874 1014 aaKnown RBP12.33□□□□□ -0.44
CDH4-202ENST00000611855 PDE6BP35913 854 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 TOM1L2Q6ZVM7 507 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 ELOA2Q8IYF1 753 aaPredicted RBP12.33□□□□□ -0.44
CDH4-202ENST00000611855 CCDC51Q96ER9 411 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 KRT23Q9C075 422 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 ABCF2Q9UG63 623 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 TRMT112Q9UI30 125 aaKnown RBP12.33□□□□□ -0.44
CDH4-202ENST00000611855 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.33□□□□□ -0.44
CDH4-202ENST00000611855 MYH7P12883 1935 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 TJP1Q07157 1748 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 NKRFO15226 690 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDH4-202ENST00000611855 ZPR1O75312 459 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 MCM3P25205 808 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 E2F5Q15329 346 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 PKN1Q16512 942 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 TSR1Q2NL82 804 aaKnown RBP12.33□□□□□ -0.44
CDH4-202ENST00000611855 WDR59Q6PJI9 974 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 OR8K1Q8NGG5 319 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 SCLT1Q96NL6 688 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 AKAP11Q9UKA4 1901 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 ZC3H4Q9UPT8 1303 aaKnown RBP12.33□□□□□ -0.44
CDH4-202ENST00000611855 MST1RQ04912 1400 aa12.33□□□□□ -0.44
CDH4-202ENST00000611855 BCAMP50895 628 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 MAP3K12Q12852 859 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 CCNI2Q6ZMN8 369 aaPredicted RBP12.32□□□□□ -0.44
CDH4-202ENST00000611855 KIF6Q6ZMV9 814 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 RASGRP4Q8TDF6 673 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 LIMA1Q9UHB6 759 aaKnown RBP12.32□□□□□ -0.44
CDH4-202ENST00000611855 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
CDH4-202ENST00000611855 PLEKP08567 350 aaPredicted RBP12.32□□□□□ -0.44
CDH4-202ENST00000611855 SOS2Q07890 1332 aaPredicted RBP12.32□□□□□ -0.44
CDH4-202ENST00000611855 IL17AQ16552 155 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 IRF2BP1Q8IU81 584 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 CNPY4Q8N129 248 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 ANKRD13CQ8N6S4 541 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 DMGDHQ9UI17 866 aaKnown RBP12.32□□□□□ -0.44
CDH4-202ENST00000611855 ODF2LQ9ULJ1 636 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 MYH10P35580 1976 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 SLIT3O75094 1523 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 NMT2O60551 498 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 PCCAP05165 728 aaPredicted RBP12.32□□□□□ -0.44
CDH4-202ENST00000611855 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
CDH4-202ENST00000611855 ELF1P32519 619 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 GUCY1A3Q02108 690 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 IFT88Q13099 833 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 CCDC70Q6NSX1 233 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 ZBTB38Q8NAP3 1195 aaPredicted RBP12.32□□□□□ -0.44
CDH4-202ENST00000611855 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 CNNM2Q9H8M5 875 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 LRP2BPQ9P2M1 347 aa12.32□□□□□ -0.44
CDH4-202ENST00000611855 KIF1CO43896 1103 aaKnown RBP12.31□□□□□ -0.44
CDH4-202ENST00000611855 SHOX2O60902 331 aaPredicted RBP12.31□□□□□ -0.44
CDH4-202ENST00000611855 RPN1P04843 607 aaKnown RBP12.31□□□□□ -0.44
CDH4-202ENST00000611855 CSF1RP07333 972 aa12.31□□□□□ -0.44
CDH4-202ENST00000611855 CDR1P51861 262 aa12.31□□□□□ -0.44
CDH4-202ENST00000611855 SEC24CP53992 1094 aa12.31□□□□□ -0.44
CDH4-202ENST00000611855 SF3A3Q12874 501 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDH4-202ENST00000611855 NEDD9Q14511 834 aa12.31□□□□□ -0.44
CDH4-202ENST00000611855 ZKSCAN4Q969J2 545 aaPredicted RBP12.31□□□□□ -0.44
CDH4-202ENST00000611855 LRRC1Q9BTT6 524 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms