RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 NEDD1Q8NHV4 660 aa25.81■■□□□ 1.72
CBWD3-207ENST00000611426 TEX13BQ9BXU2 312 aa25.81■■□□□ 1.72
CBWD3-207ENST00000611426 CTDP1Q9Y5B0 961 aaPredicted RBP25.81■■□□□ 1.72
CBWD3-207ENST00000611426 MAGEA10P43363 369 aaPredicted RBP25.8■■□□□ 1.72
CBWD3-207ENST00000611426 TFAP4Q01664 338 aa25.8■■□□□ 1.72
CBWD3-207ENST00000611426 SNRNP48Q6IEG0 339 aaKnown RBP25.8■■□□□ 1.72
CBWD3-207ENST00000611426 CCDC129Q6ZRS4 1044 aa25.8■■□□□ 1.72
CBWD3-207ENST00000611426 EVI5LQ96CN4 794 aa25.8■■□□□ 1.72
CBWD3-207ENST00000611426 SYNPO2Q9UMS6 1093 aa25.8■■□□□ 1.72
CBWD3-207ENST00000611426 DIS3Q9Y2L1 958 aaKnown RBP25.8■■□□□ 1.72
CBWD3-207ENST00000611426 ZBED4O75132 1171 aa25.79■■□□□ 1.72
CBWD3-207ENST00000611426 MYCNP04198 464 aaPredicted RBP25.79■■□□□ 1.72
CBWD3-207ENST00000611426 ATN1P54259 1190 aaPredicted RBP25.79■■□□□ 1.72
CBWD3-207ENST00000611426 LRRC47Q8N1G4 583 aaKnown RBP25.79■■□□□ 1.72
CBWD3-207ENST00000611426 KIFC2Q96AC6 838 aa25.79■■□□□ 1.72
CBWD3-207ENST00000611426 TINF2Q9BSI4 451 aa25.79■■□□□ 1.72
CBWD3-207ENST00000611426 LAMA3Q16787 3333 aa25.79■■□□□ 1.72
CBWD3-207ENST00000611426 SLC4A3P48751 1232 aa25.78■■□□□ 1.72
CBWD3-207ENST00000611426 PDE1AP54750 535 aa25.78■■□□□ 1.72
CBWD3-207ENST00000611426 ZNF792Q3KQV3 632 aa25.78■■□□□ 1.72
CBWD3-207ENST00000611426 CPXCR1Q8N123 301 aa25.78■■□□□ 1.72
CBWD3-207ENST00000611426 GMCL1P1Q8NEA9 526 aa25.78■■□□□ 1.72
CBWD3-207ENST00000611426 FEM1BQ9UK73 627 aa25.78■■□□□ 1.72
CBWD3-207ENST00000611426 KBTBD13C9JR72 458 aa25.77■■□□□ 1.72
CBWD3-207ENST00000611426 SLFN13Q68D06 897 aa25.77■■□□□ 1.72
CBWD3-207ENST00000611426 BACH2Q9BYV9 841 aa25.77■■□□□ 1.72
CBWD3-207ENST00000611426 NRBP1Q9UHY1 535 aa25.77■■□□□ 1.72
CBWD3-207ENST00000611426 RIPK3Q9Y572 518 aa25.77■■□□□ 1.72
CBWD3-207ENST00000611426 PLXNA1Q9UIW2 1896 aa25.76■■□□□ 1.71
CBWD3-207ENST00000611426 PLIN4Q96Q06 1357 aa25.76■■□□□ 1.71
CBWD3-207ENST00000611426 DDX11Q96FC9 970 aa25.76■■□□□ 1.71
CBWD3-207ENST00000611426 UBE2OQ9C0C9 1292 aaKnown RBP25.76■■□□□ 1.71
CBWD3-207ENST00000611426 SOX1O00570 391 aaPredicted RBP25.75■■□□□ 1.71
CBWD3-207ENST00000611426 ATP2A1O14983 1001 aa25.75■■□□□ 1.71
CBWD3-207ENST00000611426 BMP3P12645 472 aa25.75■■□□□ 1.71
CBWD3-207ENST00000611426 CTDSPL2Q05D32 466 aa25.75■■□□□ 1.71
CBWD3-207ENST00000611426 LNPKQ9C0E8 428 aa25.75■■□□□ 1.71
CBWD3-207ENST00000611426 SLC38A10Q9HBR0 1119 aa25.75■■□□□ 1.71
CBWD3-207ENST00000611426 HELLSQ9NRZ9 838 aa25.75■■□□□ 1.71
CBWD3-207ENST00000611426 FOXP2O15409 715 aa25.74■■□□□ 1.71
CBWD3-207ENST00000611426 RAVER2Q9HCJ3 691 aaKnown RBP25.74■■□□□ 1.71
CBWD3-207ENST00000611426 ISY1Q9ULR0 285 aaKnown RBP25.74■■□□□ 1.71
CBWD3-207ENST00000611426 SMCHD1A6NHR9 2005 aa25.74■■□□□ 1.71
CBWD3-207ENST00000611426 TSPY2A6NKD2 308 aa25.73■■□□□ 1.71
CBWD3-207ENST00000611426 RARBP10826 455 aa25.73■■□□□ 1.71
CBWD3-207ENST00000611426 LRRC41Q15345 812 aa25.73■■□□□ 1.71
CBWD3-207ENST00000611426 PPP4R3BQ5MIZ7 849 aa25.73■■□□□ 1.71
CBWD3-207ENST00000611426 VPS53Q5VIR6 699 aa25.73■■□□□ 1.71
CBWD3-207ENST00000611426 LRCH3Q96II8 777 aa25.73■■□□□ 1.71
CBWD3-207ENST00000611426 INCENPQ9NQS7 918 aa25.73■■□□□ 1.71
CBWD3-207ENST00000611426 CNPY2Q9Y2B0 182 aa25.73■■□□□ 1.71
CBWD3-207ENST00000611426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.73■■□□□ 1.71
CBWD3-207ENST00000611426 TMEM232C9JQI7 657 aa25.72■■□□□ 1.71
CBWD3-207ENST00000611426 TAL1P17542 331 aaPredicted RBP25.72■■□□□ 1.71
CBWD3-207ENST00000611426 RTP1P59025 263 aa25.72■■□□□ 1.71
CBWD3-207ENST00000611426 MDM2Q00987 491 aaPredicted RBP25.72■■□□□ 1.71
CBWD3-207ENST00000611426 SLC39A5Q6ZMH5 540 aa25.72■■□□□ 1.71
CBWD3-207ENST00000611426 TDHQ8IZJ6 230 aa25.72■■□□□ 1.71
CBWD3-207ENST00000611426 XPNPEP3Q9NQH7 507 aa25.72■■□□□ 1.71
CBWD3-207ENST00000611426 STX8Q9UNK0 236 aa25.72■■□□□ 1.71
CBWD3-207ENST00000611426 ADCYAP1R1P41586 468 aa25.71■■□□□ 1.71
CBWD3-207ENST00000611426 OAZ1P54368 228 aa25.71■■□□□ 1.71
CBWD3-207ENST00000611426 MCMDC2Q4G0Z9 681 aa25.71■■□□□ 1.71
CBWD3-207ENST00000611426 MSL3Q8N5Y2 521 aaKnown RBP25.71■■□□□ 1.71
CBWD3-207ENST00000611426 CHMP4CQ96CF2 233 aa25.71■■□□□ 1.71
CBWD3-207ENST00000611426 PRKAG2Q9UGJ0 569 aa25.71■■□□□ 1.71
CBWD3-207ENST00000611426 ATP11BQ9Y2G3 1177 aa25.71■■□□□ 1.71
CBWD3-207ENST00000611426 RANBP6O60518 1105 aaKnown RBP25.7■■□□□ 1.71
CBWD3-207ENST00000611426 ZNF865P0CJ78 1059 aaPredicted RBP25.7■■□□□ 1.71
CBWD3-207ENST00000611426 FDX1P10109 184 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 SLC1A4P43007 532 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 STAT2P52630 851 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 C8orf34Q49A92 452 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 ANKRD35Q8N283 1001 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 CHURC1Q8WUH1 139 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 FERMT2Q96AC1 680 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 GMCL1Q96IK5 515 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 FAM227BQ96M60 508 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 LBHD1Q9BQE6 289 aaPredicted RBP25.7■■□□□ 1.71
CBWD3-207ENST00000611426 FBXO40Q9UH90 709 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 ANAPC4Q9UJX5 808 aa25.7■■□□□ 1.71
CBWD3-207ENST00000611426 DNAJC25-GNG10A0A024R161 153 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 TRIM6-TRIM34B2RNG4 842 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 AKR1A1P14550 325 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 MCCP23508 829 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 IKQ13123 557 aaPredicted RBP25.69■■□□□ 1.7
CBWD3-207ENST00000611426 ALX1Q15699 326 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 RNF180Q86T96 592 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 TICAM2Q86XR7 235 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 CHST13Q8NET6 341 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 IL17RBQ9NRM6 502 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 LRIT3Q3SXY7 679 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 FAM160B2Q86V87 743 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 STAG1Q8WVM7 1258 aa25.69■■□□□ 1.7
CBWD3-207ENST00000611426 SYNGAP1Q96PV0 1343 aa25.68■■□□□ 1.7
CBWD3-207ENST00000611426 A0A0D9SFI3 127 aa25.68■■□□□ 1.7
CBWD3-207ENST00000611426 NMT2O60551 498 aa25.68■■□□□ 1.7
CBWD3-207ENST00000611426 PGK1P00558 417 aa25.68■■□□□ 1.7
CBWD3-207ENST00000611426 FGAP02671 866 aa25.68■■□□□ 1.7
CBWD3-207ENST00000611426 MAMDC4Q6UXC1 1216 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms