RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ADORA2AP29274 412 aa13.6□□□□□ -0.23
CCDC12-209ENST00000604164 TRDNQ13061 729 aa13.6□□□□□ -0.23
CCDC12-209ENST00000604164 KCTD2Q14681 263 aa13.6□□□□□ -0.23
CCDC12-209ENST00000604164 KIAA1211Q6ZU35 1233 aa13.6□□□□□ -0.23
CCDC12-209ENST00000604164 DGKHQ86XP1 1220 aa13.6□□□□□ -0.23
CCDC12-209ENST00000604164 TBC1D10CQ8IV04 446 aa13.6□□□□□ -0.23
CCDC12-209ENST00000604164 MMP19Q99542 508 aa13.6□□□□□ -0.23
CCDC12-209ENST00000604164 FBXO40Q9UH90 709 aa13.6□□□□□ -0.23
CCDC12-209ENST00000604164 ZNF214Q9UL59 606 aaPredicted RBP13.6□□□□□ -0.23
CCDC12-209ENST00000604164 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
CCDC12-209ENST00000604164 DOCK3Q8IZD9 2030 aa13.59□□□□□ -0.23
CCDC12-209ENST00000604164 RLFQ13129 1914 aa13.59□□□□□ -0.23
CCDC12-209ENST00000604164 NMT2O60551 498 aa13.59□□□□□ -0.23
CCDC12-209ENST00000604164 CENPBP07199 599 aaPredicted RBP13.59□□□□□ -0.23
CCDC12-209ENST00000604164 MAP3K21Q5TCX8 1036 aa13.59□□□□□ -0.23
CCDC12-209ENST00000604164 OLFML2BQ68BL8 750 aa13.59□□□□□ -0.23
CCDC12-209ENST00000604164 CASC1Q6TDU7 716 aa13.59□□□□□ -0.23
CCDC12-209ENST00000604164 DEFB118Q96PH6 123 aa13.59□□□□□ -0.23
CCDC12-209ENST00000604164 NBPF3Q9H094 633 aa13.59□□□□□ -0.23
CCDC12-209ENST00000604164 SLC38A10Q9HBR0 1119 aa13.59□□□□□ -0.23
CCDC12-209ENST00000604164 PNMA2Q9UL42 364 aa13.59□□□□□ -0.23
CCDC12-209ENST00000604164 KIAA0100Q14667 2235 aaKnown RBP13.58□□□□□ -0.24
CCDC12-209ENST00000604164 SGSM2O43147 1006 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 MSCO60682 206 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 CCDC96Q2M329 555 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 BMP2KLQ5H9B9 411 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 SNRNP48Q6IEG0 339 aaKnown RBP13.58□□□□□ -0.24
CCDC12-209ENST00000604164 ANKLE1Q8NAG6 615 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 CHST13Q8NET6 341 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 REPS2Q8NFH8 660 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 UBAC1Q9BSL1 405 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 HTATIP2Q9BUP3 242 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 DIS3Q9Y2L1 958 aaKnown RBP13.58□□□□□ -0.24
CCDC12-209ENST00000604164 TACC3Q9Y6A5 838 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 NEDD4P46934 1319 aa13.58□□□□□ -0.24
CCDC12-209ENST00000604164 PLXNB2O15031 1838 aa13.57□□□□□ -0.24
CCDC12-209ENST00000604164 ZNF236Q9UL36 1845 aa13.57□□□□□ -0.24
CCDC12-209ENST00000604164 KDM4AO75164 1064 aa13.57□□□□□ -0.24
CCDC12-209ENST00000604164 FARP2O94887 1054 aaPredicted RBP13.57□□□□□ -0.24
CCDC12-209ENST00000604164 CACNB2Q08289 660 aaPredicted RBP13.57□□□□□ -0.24
CCDC12-209ENST00000604164 CCL14Q16627 93 aa13.57□□□□□ -0.24
CCDC12-209ENST00000604164 TKFCQ3LXA3 575 aa13.57□□□□□ -0.24
CCDC12-209ENST00000604164 CPXCR1Q8N123 301 aa13.57□□□□□ -0.24
CCDC12-209ENST00000604164 DDX11Q96FC9 970 aa13.57□□□□□ -0.24
CCDC12-209ENST00000604164 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
CCDC12-209ENST00000604164 KAT14Q9H8E8 782 aa13.57□□□□□ -0.24
CCDC12-209ENST00000604164 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
CCDC12-209ENST00000604164 LAMA4Q16363 1823 aa13.56□□□□□ -0.24
CCDC12-209ENST00000604164 B4E1Z4 1266 aa13.56□□□□□ -0.24
CCDC12-209ENST00000604164 GPATCH4Q5T3I0 446 aaKnown RBP13.56□□□□□ -0.24
CCDC12-209ENST00000604164 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
CCDC12-209ENST00000604164 KCTD1Q719H9 257 aa13.56□□□□□ -0.24
CCDC12-209ENST00000604164 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC12-209ENST00000604164 RALYLQ86SE5 291 aaKnown RBP13.56□□□□□ -0.24
CCDC12-209ENST00000604164 MSL3Q8N5Y2 521 aaKnown RBP13.56□□□□□ -0.24
CCDC12-209ENST00000604164 NPLOC4Q8TAT6 608 aa13.56□□□□□ -0.24
CCDC12-209ENST00000604164 ANKS1AQ92625 1134 aa13.56□□□□□ -0.24
CCDC12-209ENST00000604164 SHISA4Q96DD7 197 aa13.56□□□□□ -0.24
CCDC12-209ENST00000604164 ZSCAN10Q96SZ4 725 aaPredicted RBP13.56□□□□□ -0.24
CCDC12-209ENST00000604164 RAVER2Q9HCJ3 691 aaKnown RBP13.56□□□□□ -0.24
CCDC12-209ENST00000604164 NRBP1Q9UHY1 535 aa13.56□□□□□ -0.24
CCDC12-209ENST00000604164 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
CCDC12-209ENST00000604164 ERICH2A1L162 156 aa13.55□□□□□ -0.24
CCDC12-209ENST00000604164 COBLO75128 1261 aa13.55□□□□□ -0.24
CCDC12-209ENST00000604164 PDHBP11177 359 aa13.55□□□□□ -0.24
CCDC12-209ENST00000604164 SLC4A3P48751 1232 aa13.55□□□□□ -0.24
CCDC12-209ENST00000604164 TRIM32Q13049 653 aa13.55□□□□□ -0.24
CCDC12-209ENST00000604164 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
CCDC12-209ENST00000604164 PRPF38BQ5VTL8 546 aaKnown RBP13.55□□□□□ -0.24
CCDC12-209ENST00000604164 BTNL9Q6UXG8 535 aa13.55□□□□□ -0.24
CCDC12-209ENST00000604164 MAML3Q96JK9 1138 aa13.55□□□□□ -0.24
CCDC12-209ENST00000604164 ZSWIM5Q9P217 1185 aa13.55□□□□□ -0.24
CCDC12-209ENST00000604164 CENPFP49454 3210 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 CNGA1P29973 690 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 IFIT1BQ5T764 474 aaKnown RBP13.54□□□□□ -0.24
CCDC12-209ENST00000604164 SYDE2Q5VT97 1194 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 NECAB2Q7Z6G3 386 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 ANKRD35Q8N283 1001 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 PNMA1Q8ND90 353 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 NCOA7Q8NI08 942 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 MAP4K1Q92918 833 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 ZKSCAN3Q9BRR0 538 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 IL25Q9H293 177 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 ACAD9Q9H845 621 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 FLRT1Q9NZU1 646 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 PFASO15067 1338 aa13.54□□□□□ -0.24
CCDC12-209ENST00000604164 COL11A1P12107 1806 aaPredicted RBP13.53□□□□□ -0.24
CCDC12-209ENST00000604164 CYP21A2P08686 494 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 SNHG28P0DPA3 235 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 CCND3P30281 292 aaPredicted RBP13.53□□□□□ -0.24
CCDC12-209ENST00000604164 CYP2C19P33261 490 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 PTH1RQ03431 593 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 ZNF792Q3KQV3 632 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 ASPRV1Q53RT3 343 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 UBE2Q1Q7Z7E8 422 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 ZNF467Q7Z7K2 595 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms