RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 RTN3O95197 1032 aaPredicted RBP12.46□□□□□ -0.41
ZNF559-213ENST00000603380 LINGO3P0C6S8 592 aa12.46□□□□□ -0.41
ZNF559-213ENST00000603380 GHRP10912 638 aa12.46□□□□□ -0.41
ZNF559-213ENST00000603380 COPB1P53618 953 aaKnown RBP12.46□□□□□ -0.41
ZNF559-213ENST00000603380 CCDC181Q5TID7 509 aa12.46□□□□□ -0.41
ZNF559-213ENST00000603380 MSL1Q68DK7 614 aa12.46□□□□□ -0.41
ZNF559-213ENST00000603380 MREGQ8N565 214 aa12.46□□□□□ -0.41
ZNF559-213ENST00000603380 L3MBTL3Q96JM7 780 aaPredicted RBP12.46□□□□□ -0.41
ZNF559-213ENST00000603380 KDM4CQ9H3R0 1056 aa12.46□□□□□ -0.41
ZNF559-213ENST00000603380 MYO5AQ9Y4I1 1855 aaKnown RBP12.46□□□□□ -0.41
ZNF559-213ENST00000603380 BCL9LQ86UU0 1499 aa12.46□□□□□ -0.42
ZNF559-213ENST00000603380 PRC1O43663 620 aa12.46□□□□□ -0.42
ZNF559-213ENST00000603380 CLSTN1O94985 981 aa12.46□□□□□ -0.42
ZNF559-213ENST00000603380 MATR3P43243 847 aaKnown RBP eCLIP12.46□□□□□ -0.42
ZNF559-213ENST00000603380 ANTXR2P58335 489 aa12.46□□□□□ -0.42
ZNF559-213ENST00000603380 SLMAPQ14BN4 828 aa12.46□□□□□ -0.42
ZNF559-213ENST00000603380 ARMC3Q5W041 872 aa12.46□□□□□ -0.42
ZNF559-213ENST00000603380 KANK3Q6NY19 840 aa12.46□□□□□ -0.42
ZNF559-213ENST00000603380 USP49Q70CQ1 688 aa12.46□□□□□ -0.42
ZNF559-213ENST00000603380 A6NHS1 94 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 LIN7AO14910 233 aaPredicted RBP12.45□□□□□ -0.42
ZNF559-213ENST00000603380 COBLO75128 1261 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 CARSP49589 748 aaKnown RBP12.45□□□□□ -0.42
ZNF559-213ENST00000603380 VAV2P52735 878 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 KRT83P78385 493 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 ZMYM1Q5SVZ6 1142 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 KSR2Q6VAB6 950 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 CACNA2D3Q8IZS8 1091 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 DBNDD2Q9BQY9 259 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 CASP1P29466 404 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 HPDP32754 393 aaPredicted RBP12.45□□□□□ -0.42
ZNF559-213ENST00000603380 TOB1P50616 345 aaPredicted RBP12.45□□□□□ -0.42
ZNF559-213ENST00000603380 BLMHQ13867 455 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 PPP1R7Q15435 360 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 MB21D2Q8IYB1 491 aaPredicted RBP12.45□□□□□ -0.42
ZNF559-213ENST00000603380 SENP2Q9HC62 589 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 SLC5A4Q9NY91 659 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 TAB2Q9NYJ8 693 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 SMARCAL1Q9NZC9 954 aa12.45□□□□□ -0.42
ZNF559-213ENST00000603380 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
ZNF559-213ENST00000603380 H7C1W4 665 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 TTF1Q15361 905 aaPredicted RBP12.44□□□□□ -0.42
ZNF559-213ENST00000603380 SLC30A9Q6PML9 568 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 OSBPL9Q96SU4 736 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 GDF3Q9NR23 364 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.44□□□□□ -0.42
ZNF559-213ENST00000603380 NFU1Q9UMS0 254 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 FLT4P35916 1363 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 MACROD2A1Z1Q3 448 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 KCNQ3O43525 872 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 GLI1P08151 1106 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 TFCP2Q12800 502 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 CWF19L1Q69YN2 538 aaKnown RBP12.44□□□□□ -0.42
ZNF559-213ENST00000603380 NDST4Q9H3R1 872 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 TMBIM4Q9HC24 238 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 DBF4Q9UBU7 674 aaPredicted RBP12.44□□□□□ -0.42
ZNF559-213ENST00000603380 MAST3O60307 1309 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 UBN2Q6ZU65 1347 aa12.44□□□□□ -0.42
ZNF559-213ENST00000603380 PES1O00541 588 aaKnown RBP12.43□□□□□ -0.42
ZNF559-213ENST00000603380 BACH1O14867 736 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 PRLRP16471 622 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
ZNF559-213ENST00000603380 CDC37Q16543 378 aaPredicted RBP12.43□□□□□ -0.42
ZNF559-213ENST00000603380 ARFGAP2Q8N6H7 521 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
ZNF559-213ENST00000603380 CCHCR1Q8TD31 782 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 AGAP11Q8TF27 550 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 EHD2Q9NZN4 543 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 MEA1Q16626 185 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 PROSER3Q2NL68 480 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 C8orf74Q6P047 294 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 MFN1Q8IWA4 741 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 LINS1Q8NG48 757 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 CNKSR1Q969H4 720 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 KCNMB3Q9NPA1 279 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 LUC7L2Q9Y383 392 aaKnown RBP12.43□□□□□ -0.42
ZNF559-213ENST00000603380 NWD2Q9ULI1 1742 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 A0A087X0B3 334 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 PYGLP06737 847 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 TMOD1P28289 359 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 ABL2P42684 1182 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 PPARDQ03181 441 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 TCP11X2Q5H9J9 407 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 EPHA10Q5JZY3 1008 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 SH3RF1Q7Z6J0 888 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 PHKBQ93100 1093 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 NOP53Q9NZM5 478 aaKnown RBP12.43□□□□□ -0.42
ZNF559-213ENST00000603380 CTNND2Q9UQB3 1225 aa12.43□□□□□ -0.42
ZNF559-213ENST00000603380 MYH10P35580 1976 aa12.42□□□□□ -0.42
ZNF559-213ENST00000603380 ZSCAN5CA6NGD5 496 aaPredicted RBP12.42□□□□□ -0.42
ZNF559-213ENST00000603380 DIAPH2O60879 1101 aa12.42□□□□□ -0.42
ZNF559-213ENST00000603380 AFMP43652 599 aa12.42□□□□□ -0.42
ZNF559-213ENST00000603380 PAPOLAP51003 745 aaKnown RBP12.42□□□□□ -0.42
ZNF559-213ENST00000603380 HAND2P61296 217 aa12.42□□□□□ -0.42
ZNF559-213ENST00000603380 IFT20Q8IY31 132 aa12.42□□□□□ -0.42
ZNF559-213ENST00000603380 KLHL23Q8NBE8 558 aa12.42□□□□□ -0.42
ZNF559-213ENST00000603380 SMCR8Q8TEV9 937 aaPredicted RBP12.42□□□□□ -0.42
ZNF559-213ENST00000603380 RBM12Q9NTZ6 932 aaKnown RBP12.42□□□□□ -0.42
ZNF559-213ENST00000603380 PANK4Q9NVE7 773 aa12.42□□□□□ -0.42
ZNF559-213ENST00000603380 CAPN6Q9Y6Q1 641 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms