RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 ZNF865P0CJ78 1059 aaPredicted RBP22.5■■□□□ 1.19
SNRPA-204ENST00000598452 RARBP10826 455 aa22.5■■□□□ 1.19
SNRPA-204ENST00000598452 TRIM60Q495X7 471 aa22.5■■□□□ 1.19
SNRPA-204ENST00000598452 GPR153Q6NV75 609 aa22.5■■□□□ 1.19
SNRPA-204ENST00000598452 CCDC129Q6ZRS4 1044 aa22.5■■□□□ 1.19
SNRPA-204ENST00000598452 NAPBQ9H115 298 aa22.5■■□□□ 1.19
SNRPA-204ENST00000598452 RAVER2Q9HCJ3 691 aaKnown RBP22.5■■□□□ 1.19
SNRPA-204ENST00000598452 XPNPEP3Q9NQH7 507 aa22.5■■□□□ 1.19
SNRPA-204ENST00000598452 PRKAG2Q9UGJ0 569 aa22.5■■□□□ 1.19
SNRPA-204ENST00000598452 ZBED4O75132 1171 aa22.49■■□□□ 1.19
SNRPA-204ENST00000598452 TTLL1O95922 423 aa22.49■■□□□ 1.19
SNRPA-204ENST00000598452 TSPY3P0CV98 308 aa22.49■■□□□ 1.19
SNRPA-204ENST00000598452 TSPY8P0CW00 308 aa22.49■■□□□ 1.19
SNRPA-204ENST00000598452 RRP1P56182 461 aaKnown RBP22.49■■□□□ 1.19
SNRPA-204ENST00000598452 PPARAQ07869 468 aa22.49■■□□□ 1.19
SNRPA-204ENST00000598452 NEDD1Q8NHV4 660 aa22.49■■□□□ 1.19
SNRPA-204ENST00000598452 CHMP4CQ96CF2 233 aa22.49■■□□□ 1.19
SNRPA-204ENST00000598452 PRDM5Q9NQX1 630 aaPredicted RBP22.49■■□□□ 1.19
SNRPA-204ENST00000598452 ZBTB47Q9UFB7 747 aaPredicted RBP22.49■■□□□ 1.19
SNRPA-204ENST00000598452 TFAP4Q01664 338 aa22.48■■□□□ 1.19
SNRPA-204ENST00000598452 PDE4BQ07343 736 aa22.48■■□□□ 1.19
SNRPA-204ENST00000598452 SNX17Q15036 470 aa22.48■■□□□ 1.19
SNRPA-204ENST00000598452 SLFN13Q68D06 897 aa22.48■■□□□ 1.19
SNRPA-204ENST00000598452 DDX11Q96FC9 970 aa22.48■■□□□ 1.19
SNRPA-204ENST00000598452 INCENPQ9NQS7 918 aa22.48■■□□□ 1.19
SNRPA-204ENST00000598452 CTDP1Q9Y5B0 961 aaPredicted RBP22.48■■□□□ 1.19
SNRPA-204ENST00000598452 SALL3Q9BXA9 1300 aa22.48■■□□□ 1.19
SNRPA-204ENST00000598452 SMCHD1A6NHR9 2005 aa22.48■■□□□ 1.19
SNRPA-204ENST00000598452 PLXNA1Q9UIW2 1896 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 ATP2A1O14983 1001 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 FOXP2O15409 715 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 SNAI1O95863 264 aaPredicted RBP22.47■■□□□ 1.19
SNRPA-204ENST00000598452 ANKRD45Q5TZF3 282 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 SH3RF1Q7Z6J0 888 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 GMCL1P1Q8NEA9 526 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 CRBNQ96SW2 442 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 SLC38A10Q9HBR0 1119 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 FEM1BQ9UK73 627 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 PHF24Q9UPV7 400 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 CNPY2Q9Y2B0 182 aa22.47■■□□□ 1.19
SNRPA-204ENST00000598452 DNAJC25-GNG10A0A024R161 153 aa22.46■■□□□ 1.19
SNRPA-204ENST00000598452 SLC3A2P08195 630 aaKnown RBP22.46■■□□□ 1.19
SNRPA-204ENST00000598452 AKR1A1P14550 325 aa22.46■■□□□ 1.19
SNRPA-204ENST00000598452 PDLIM7Q9NR12 457 aa22.46■■□□□ 1.19
SNRPA-204ENST00000598452 ISY1Q9ULR0 285 aaKnown RBP22.46■■□□□ 1.19
SNRPA-204ENST00000598452 PLIN4Q96Q06 1357 aa22.46■■□□□ 1.19
SNRPA-204ENST00000598452 BMP3P12645 472 aa22.45■■□□□ 1.18
SNRPA-204ENST00000598452 TLE2Q04725 743 aa22.45■■□□□ 1.18
SNRPA-204ENST00000598452 CTDSPL2Q05D32 466 aa22.45■■□□□ 1.18
SNRPA-204ENST00000598452 RNF180Q86T96 592 aa22.45■■□□□ 1.18
SNRPA-204ENST00000598452 BADQ92934 168 aa22.45■■□□□ 1.18
SNRPA-204ENST00000598452 MTMR10Q9NXD2 777 aa22.45■■□□□ 1.18
SNRPA-204ENST00000598452 ZHX1Q9UKY1 873 aaPredicted RBP22.45■■□□□ 1.18
SNRPA-204ENST00000598452 SYNPO2Q9UMS6 1093 aa22.45■■□□□ 1.18
SNRPA-204ENST00000598452 TRIM43BA6NCK2 446 aa22.44■■□□□ 1.18
SNRPA-204ENST00000598452 TMEM232C9JQI7 657 aa22.44■■□□□ 1.18
SNRPA-204ENST00000598452 VPS53Q5VIR6 699 aa22.44■■□□□ 1.18
SNRPA-204ENST00000598452 MAMDC4Q6UXC1 1216 aa22.44■■□□□ 1.18
SNRPA-204ENST00000598452 SLC17A8Q8NDX2 589 aa22.44■■□□□ 1.18
SNRPA-204ENST00000598452 TRIM43Q96BQ3 446 aaPredicted RBP22.44■■□□□ 1.18
SNRPA-204ENST00000598452 FGD4Q96M96 766 aa22.44■■□□□ 1.18
SNRPA-204ENST00000598452 TACC3Q9Y6A5 838 aa22.44■■□□□ 1.18
SNRPA-204ENST00000598452 SYNGAP1Q96PV0 1343 aa22.43■■□□□ 1.18
SNRPA-204ENST00000598452 A0A1W2PQ45 241 aaPredicted RBP22.43■■□□□ 1.18
SNRPA-204ENST00000598452 A0A1W2PQY0 241 aa22.43■■□□□ 1.18
SNRPA-204ENST00000598452 ADAMTS4O75173 837 aa22.43■■□□□ 1.18
SNRPA-204ENST00000598452 C1orf53Q5VUE5 145 aa22.43■■□□□ 1.18
SNRPA-204ENST00000598452 ANKRD35Q8N283 1001 aa22.43■■□□□ 1.18
SNRPA-204ENST00000598452 MSL3Q8N5Y2 521 aaKnown RBP22.43■■□□□ 1.18
SNRPA-204ENST00000598452 HOMER2Q9NSB8 354 aa22.43■■□□□ 1.18
SNRPA-204ENST00000598452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.43■■□□□ 1.18
SNRPA-204ENST00000598452 NMT2O60551 498 aa22.42■■□□□ 1.18
SNRPA-204ENST00000598452 MCCP23508 829 aa22.42■■□□□ 1.18
SNRPA-204ENST00000598452 SHHQ15465 462 aa22.42■■□□□ 1.18
SNRPA-204ENST00000598452 C9orf50Q5SZB4 431 aa22.42■■□□□ 1.18
SNRPA-204ENST00000598452 IL17RBQ9NRM6 502 aa22.42■■□□□ 1.18
SNRPA-204ENST00000598452 FAM184BQ9ULE4 1060 aa22.42■■□□□ 1.18
SNRPA-204ENST00000598452 STX8Q9UNK0 236 aa22.42■■□□□ 1.18
SNRPA-204ENST00000598452 COL6A3P12111 3177 aa22.42■■□□□ 1.18
SNRPA-204ENST00000598452 SYNRGQ9UMZ2 1314 aa22.41■■□□□ 1.18
SNRPA-204ENST00000598452 ITGB8P26012 769 aa22.41■■□□□ 1.18
SNRPA-204ENST00000598452 SLC1A4P43007 532 aa22.41■■□□□ 1.18
SNRPA-204ENST00000598452 OAZ1P54368 228 aa22.41■■□□□ 1.18
SNRPA-204ENST00000598452 IRX5P78411 483 aaPredicted RBP22.41■■□□□ 1.18
SNRPA-204ENST00000598452 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.41■■□□□ 1.18
SNRPA-204ENST00000598452 RASGRP2Q7LDG7 609 aa22.41■■□□□ 1.18
SNRPA-204ENST00000598452 ZNF467Q7Z7K2 595 aaPredicted RBP22.41■■□□□ 1.18
SNRPA-204ENST00000598452 CHST13Q8NET6 341 aa22.41■■□□□ 1.18
SNRPA-204ENST00000598452 EVI5LQ96CN4 794 aa22.41■■□□□ 1.18
SNRPA-204ENST00000598452 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.41■■□□□ 1.18
SNRPA-204ENST00000598452 FBXO40Q9UH90 709 aa22.41■■□□□ 1.18
SNRPA-204ENST00000598452 LTBP2Q14767 1821 aa22.41■■□□□ 1.18
SNRPA-204ENST00000598452 MYADML2A6NDP7 307 aa22.4■■□□□ 1.18
SNRPA-204ENST00000598452 TSPY2A6NKD2 308 aa22.4■■□□□ 1.18
SNRPA-204ENST00000598452 ADCY6O43306 1168 aa22.4■■□□□ 1.18
SNRPA-204ENST00000598452 PQBP1O60828 265 aaKnown RBP22.4■■□□□ 1.18
SNRPA-204ENST00000598452 STAT2P52630 851 aa22.4■■□□□ 1.18
SNRPA-204ENST00000598452 PDE1AP54750 535 aa22.4■■□□□ 1.18
SNRPA-204ENST00000598452 SNAP25P60880 206 aa22.4■■□□□ 1.18
SNRPA-204ENST00000598452 IKQ13123 557 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms