RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 SESN3P58005 492 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 BEND3Q5T5X7 828 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 STMN2Q93045 179 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 UBXN6Q9BZV1 441 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 TLR7Q9NYK1 1049 aaKnown RBP13.6□□□□□ -0.23
LIG1-207ENST00000594759 ALKQ9UM73 1620 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 CARMIL3Q8ND23 1372 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 STXBP3O00186 592 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 BACH1O14867 736 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 SYF2O95926 243 aaKnown RBP13.6□□□□□ -0.23
LIG1-207ENST00000594759 TFCP2Q12800 502 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 MYCBPAPQ8TBZ2 947 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 KIFC2Q96AC6 838 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 CYFIP2Q96F07 1278 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 RNPC3Q96LT9 517 aaKnown RBP13.6□□□□□ -0.23
LIG1-207ENST00000594759 DBNDD2Q9BQY9 259 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 TRIM31Q9BZY9 425 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 ATP1A1P05023 1023 aaKnown RBP13.6□□□□□ -0.23
LIG1-207ENST00000594759 IFNAR2P48551 515 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 PTGISQ16647 500 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 C6orf163Q5TEZ5 329 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 LDHAL6AQ6ZMR3 332 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 RASGRP2Q7LDG7 609 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 CCDC26Q8TAB7 109 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 DCAF5Q96JK2 942 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 ATP6V1G3Q96LB4 118 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 PYM1Q9BRP8 204 aaKnown RBP13.6□□□□□ -0.23
LIG1-207ENST00000594759 TAF6LQ9Y6J9 622 aa13.6□□□□□ -0.23
LIG1-207ENST00000594759 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 GRAMD1CQ8IYS0 662 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 B4GALNT2Q8NHY0 566 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 PAG1Q9NWQ8 432 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 ADCY9O60503 1353 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 PECAM1P16284 738 aaPredicted RBP13.59□□□□□ -0.23
LIG1-207ENST00000594759 RILPL1Q5EBL4 403 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 ARL8AQ96BM9 186 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 NUP58Q9BVL2 599 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 SLAIN2Q9P270 581 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 CD2APQ9Y5K6 639 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 ERBB3P21860 1342 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 ATP7BP35670 1465 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 ARHGEF40Q8TER5 1519 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 KCNJ18B7U540 433 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
LIG1-207ENST00000594759 GNAT1P11488 350 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 DESP17661 470 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 KCNJ12Q14500 433 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 SEPT2Q15019 361 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 IFI16Q16666 785 aaKnown RBP13.59□□□□□ -0.23
LIG1-207ENST00000594759 THEMIS2Q5TEJ8 643 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 FUKQ8N0W3 1084 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 ANKRD13CQ8N6S4 541 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 ARHGEF2Q92974 986 aaKnown RBP13.59□□□□□ -0.23
LIG1-207ENST00000594759 KRT12Q99456 494 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 DDX20Q9UHI6 824 aaKnown RBP13.59□□□□□ -0.23
LIG1-207ENST00000594759 TSKSQ9UJT2 592 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 PLAAQ9Y263 795 aa13.59□□□□□ -0.23
LIG1-207ENST00000594759 CTCFP49711 727 aaPredicted RBP13.58□□□□□ -0.23
LIG1-207ENST00000594759 KCNV1Q6PIU1 500 aa13.58□□□□□ -0.23
LIG1-207ENST00000594759 FAM114A2Q9NRY5 505 aa13.58□□□□□ -0.23
LIG1-207ENST00000594759 INTS9Q9NV88 658 aaKnown RBP13.58□□□□□ -0.23
LIG1-207ENST00000594759 DIP2CQ9Y2E4 1556 aa13.58□□□□□ -0.23
LIG1-207ENST00000594759 ANKRD62A6NC57 917 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 FERP16591 822 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 ALDH3A1P30838 453 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 COPB1P53618 953 aaKnown RBP13.58□□□□□ -0.24
LIG1-207ENST00000594759 SH3BGRP55822 239 aaPredicted RBP13.58□□□□□ -0.24
LIG1-207ENST00000594759 ELAC2Q9BQ52 826 aaKnown RBP13.58□□□□□ -0.24
LIG1-207ENST00000594759 LRRC1Q9BTT6 524 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 TMEM94Q12767 1356 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 GSTTP1A0A1W2PQM5 241 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 CFAP73A6NFT4 308 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 RGS16O15492 202 aaPredicted RBP13.58□□□□□ -0.24
LIG1-207ENST00000594759 FGFR1OPO95684 399 aaKnown RBP13.58□□□□□ -0.24
LIG1-207ENST00000594759 ARID5AQ03989 594 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 SOGA3Q5TF21 947 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 TYW1BQ6NUM6 668 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 PPP6R2O75170 966 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 FLOT1O75955 427 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 SUN1O94901 812 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 PROSER3Q2NL68 480 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 ABTB1Q969K4 478 aaPredicted RBP13.58□□□□□ -0.24
LIG1-207ENST00000594759 STAMBPL1Q96FJ0 436 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 SEC16BQ96JE7 1060 aa13.58□□□□□ -0.24
LIG1-207ENST00000594759 TULP4Q9NRJ4 1543 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 CEP104O60308 925 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 MRPL12P52815 198 aaKnown RBP13.57□□□□□ -0.24
LIG1-207ENST00000594759 CYP27A1Q02318 531 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 MGARPQ8TDB4 240 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 WHAMMQ8TF30 809 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 TEKT4Q8WW24 435 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 ABHD10Q9NUJ1 306 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 KLHL14Q9P2G3 628 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 A0A1W2PRG0 241 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 ADD1P35611 737 aaKnown RBP13.57□□□□□ -0.24
LIG1-207ENST00000594759 SLC9C2Q5TAH2 1124 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 HHATQ5VTY9 493 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 NELFBQ8WX92 580 aa13.57□□□□□ -0.24
LIG1-207ENST00000594759 SUCLG2Q96I99 432 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 274.4 ms