RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 SYNPO2Q9UMS6 1093 aa19.17■□□□□ 0.66
CIRBP-241ENST00000593048 DIS3Q9Y2L1 958 aaKnown RBP19.17■□□□□ 0.66
CIRBP-241ENST00000593048 TSPY2A6NKD2 308 aa19.16■□□□□ 0.66
CIRBP-241ENST00000593048 SOX1O00570 391 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-241ENST00000593048 BMP3P12645 472 aa19.16■□□□□ 0.66
CIRBP-241ENST00000593048 MAGEA10P43363 369 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-241ENST00000593048 PPP4R3BQ5MIZ7 849 aa19.16■□□□□ 0.66
CIRBP-241ENST00000593048 GMCL1P1Q8NEA9 526 aa19.16■□□□□ 0.66
CIRBP-241ENST00000593048 TINF2Q9BSI4 451 aa19.16■□□□□ 0.66
CIRBP-241ENST00000593048 LNPKQ9C0E8 428 aa19.16■□□□□ 0.66
CIRBP-241ENST00000593048 RWDD1Q9H446 243 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-241ENST00000593048 HELLSQ9NRZ9 838 aa19.16■□□□□ 0.66
CIRBP-241ENST00000593048 COL6A3P12111 3177 aa19.16■□□□□ 0.66
CIRBP-241ENST00000593048 TRIM6-TRIM34B2RNG4 842 aa19.15■□□□□ 0.66
CIRBP-241ENST00000593048 CTDSPL2Q05D32 466 aa19.15■□□□□ 0.66
CIRBP-241ENST00000593048 IKQ13123 557 aaPredicted RBP19.15■□□□□ 0.66
CIRBP-241ENST00000593048 ZNF792Q3KQV3 632 aa19.15■□□□□ 0.66
CIRBP-241ENST00000593048 B4GALNT3Q6L9W6 998 aa19.15■□□□□ 0.66
CIRBP-241ENST00000593048 UBE2OQ9C0C9 1292 aaKnown RBP19.15■□□□□ 0.66
CIRBP-241ENST00000593048 RAVER2Q9HCJ3 691 aaKnown RBP19.15■□□□□ 0.66
CIRBP-241ENST00000593048 NRBP1Q9UHY1 535 aa19.15■□□□□ 0.66
CIRBP-241ENST00000593048 STX8Q9UNK0 236 aa19.15■□□□□ 0.66
CIRBP-241ENST00000593048 GREB1LQ9C091 1923 aaPredicted RBP19.14■□□□□ 0.65
CIRBP-241ENST00000593048 TMEM232C9JQI7 657 aa19.14■□□□□ 0.65
CIRBP-241ENST00000593048 RARBP10826 455 aa19.14■□□□□ 0.65
CIRBP-241ENST00000593048 VPS53Q5VIR6 699 aa19.14■□□□□ 0.65
CIRBP-241ENST00000593048 CHMP4CQ96CF2 233 aa19.14■□□□□ 0.65
CIRBP-241ENST00000593048 SLC38A10Q9HBR0 1119 aa19.14■□□□□ 0.65
CIRBP-241ENST00000593048 PPP4R2Q9NY27 417 aa19.14■□□□□ 0.65
CIRBP-241ENST00000593048 PRKAG2Q9UGJ0 569 aa19.14■□□□□ 0.65
CIRBP-241ENST00000593048 CNPY2Q9Y2B0 182 aa19.14■□□□□ 0.65
CIRBP-241ENST00000593048 RIPK3Q9Y572 518 aa19.14■□□□□ 0.65
CIRBP-241ENST00000593048 PLIN4Q96Q06 1357 aa19.14■□□□□ 0.65
CIRBP-241ENST00000593048 ATP2A1O14983 1001 aa19.13■□□□□ 0.65
CIRBP-241ENST00000593048 RANBP6O60518 1105 aaKnown RBP19.13■□□□□ 0.65
CIRBP-241ENST00000593048 SLC1A4P43007 532 aa19.13■□□□□ 0.65
CIRBP-241ENST00000593048 STAT2P52630 851 aa19.13■□□□□ 0.65
CIRBP-241ENST00000593048 MDM2Q00987 491 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-241ENST00000593048 MCMDC2Q4G0Z9 681 aa19.13■□□□□ 0.65
CIRBP-241ENST00000593048 ANKRD35Q8N283 1001 aa19.13■□□□□ 0.65
CIRBP-241ENST00000593048 CHURC1Q8WUH1 139 aa19.13■□□□□ 0.65
CIRBP-241ENST00000593048 RILPL2Q969X0 211 aa19.13■□□□□ 0.65
CIRBP-241ENST00000593048 LBHD1Q9BQE6 289 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-241ENST00000593048 INCENPQ9NQS7 918 aa19.13■□□□□ 0.65
CIRBP-241ENST00000593048 TOMM22Q9NS69 142 aa19.13■□□□□ 0.65
CIRBP-241ENST00000593048 ATP11BQ9Y2G3 1177 aa19.13■□□□□ 0.65
CIRBP-241ENST00000593048 COL11A1P12107 1806 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-241ENST00000593048 PARP14Q460N5 1801 aa19.12■□□□□ 0.65
CIRBP-241ENST00000593048 FDX1P10109 184 aa19.12■□□□□ 0.65
CIRBP-241ENST00000593048 RTP1P59025 263 aa19.12■□□□□ 0.65
CIRBP-241ENST00000593048 LRRC41Q15345 812 aa19.12■□□□□ 0.65
CIRBP-241ENST00000593048 LRCH3Q96II8 777 aa19.12■□□□□ 0.65
CIRBP-241ENST00000593048 FAM227BQ96M60 508 aa19.12■□□□□ 0.65
CIRBP-241ENST00000593048 XPNPEP3Q9NQH7 507 aa19.12■□□□□ 0.65
CIRBP-241ENST00000593048 FBXO40Q9UH90 709 aa19.12■□□□□ 0.65
CIRBP-241ENST00000593048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.12■□□□□ 0.65
CIRBP-241ENST00000593048 FOXP2O15409 715 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 AKR1A1P14550 325 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 TAL1P17542 331 aaPredicted RBP19.11■□□□□ 0.65
CIRBP-241ENST00000593048 MCCP23508 829 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 ADCYAP1R1P41586 468 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 OAZ1P54368 228 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 ALX1Q15699 326 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 SLC39A5Q6ZMH5 540 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 RNF180Q86T96 592 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 FAM160B2Q86V87 743 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 TICAM2Q86XR7 235 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 TDHQ8IZJ6 230 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 MSL3Q8N5Y2 521 aaKnown RBP19.11■□□□□ 0.65
CIRBP-241ENST00000593048 CHST13Q8NET6 341 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 FERMT2Q96AC1 680 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 GMCL1Q96IK5 515 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 HOMER2Q9NSB8 354 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 ANAPC4Q9UJX5 808 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 MTMR7Q9Y216 660 aa19.11■□□□□ 0.65
CIRBP-241ENST00000593048 A0A0D9SFI3 127 aa19.1■□□□□ 0.65
CIRBP-241ENST00000593048 NMT2O60551 498 aa19.1■□□□□ 0.65
CIRBP-241ENST00000593048 RRP12Q5JTH9 1297 aaKnown RBP19.1■□□□□ 0.65
CIRBP-241ENST00000593048 STAG1Q8WVM7 1258 aa19.1■□□□□ 0.65
CIRBP-241ENST00000593048 FRMPD3Q5JV73 1810 aa19.09■□□□□ 0.65
CIRBP-241ENST00000593048 PGK1P00558 417 aa19.09■□□□□ 0.65
CIRBP-241ENST00000593048 FGAP02671 866 aa19.09■□□□□ 0.65
CIRBP-241ENST00000593048 ZNF865P0CJ78 1059 aaPredicted RBP19.09■□□□□ 0.65
CIRBP-241ENST00000593048 NMIQ13287 307 aaPredicted RBP19.09■□□□□ 0.65
CIRBP-241ENST00000593048 KCTD1Q719H9 257 aa19.09■□□□□ 0.65
CIRBP-241ENST00000593048 CHD1LQ86WJ1 897 aa19.09■□□□□ 0.65
CIRBP-241ENST00000593048 SMC5Q8IY18 1101 aa19.09■□□□□ 0.65
CIRBP-241ENST00000593048 IL17RBQ9NRM6 502 aa19.09■□□□□ 0.65
CIRBP-241ENST00000593048 ZHX1Q9UKY1 873 aaPredicted RBP19.09■□□□□ 0.65
CIRBP-241ENST00000593048 MYH4Q9Y623 1939 aa19.09■□□□□ 0.65
CIRBP-241ENST00000593048 SYNGAP1Q96PV0 1343 aa19.08■□□□□ 0.65
CIRBP-241ENST00000593048 DNAJC25-GNG10A0A024R161 153 aa19.08■□□□□ 0.64
CIRBP-241ENST00000593048 ORC4O43929 436 aa19.08■□□□□ 0.64
CIRBP-241ENST00000593048 HSPD1P10809 573 aaKnown RBP19.08■□□□□ 0.64
CIRBP-241ENST00000593048 RCSD1Q6JBY9 416 aa19.08■□□□□ 0.64
CIRBP-241ENST00000593048 EXOC6Q8TAG9 804 aa19.08■□□□□ 0.64
CIRBP-241ENST00000593048 ACAD9Q9H845 621 aa19.08■□□□□ 0.64
CIRBP-241ENST00000593048 PRDM5Q9NQX1 630 aaPredicted RBP19.08■□□□□ 0.64
CIRBP-241ENST00000593048 FAM184BQ9ULE4 1060 aa19.08■□□□□ 0.64
CIRBP-241ENST00000593048 ZNFX1Q9P2E3 1918 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms