RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 FRMPD2Q68DX3 1309 aaPredicted RBP12.45□□□□□ -0.42
GFAP-216ENST00000589701 CCDC88AQ3V6T2 1871 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 TOP1P11387 765 aaKnown RBP12.45□□□□□ -0.42
GFAP-216ENST00000589701 NCBP1Q09161 790 aaKnown RBP12.45□□□□□ -0.42
GFAP-216ENST00000589701 CUL4BQ13620 913 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 MORC3Q14149 939 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 MTF1Q14872 753 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 PFKFB3Q16875 520 aaPredicted RBP12.45□□□□□ -0.42
GFAP-216ENST00000589701 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 WWC2Q6AWC2 1192 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 ZNF444Q8N0Y2 327 aaPredicted RBP12.45□□□□□ -0.42
GFAP-216ENST00000589701 TMEM47Q9BQJ4 181 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 RTFDC1Q9BY42 306 aaPredicted RBP12.45□□□□□ -0.42
GFAP-216ENST00000589701 MTFR1LQ9H019 292 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 PCDHAC2Q9Y5I4 1007 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 TAF1LQ8IZX4 1826 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 FAM196BA6NMK8 535 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 RAD21O60216 631 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 DDAH1O94760 285 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 CCT6AP40227 531 aaKnown RBP12.44□□□□□ -0.42
GFAP-216ENST00000589701 SARSP49591 514 aaKnown RBP12.44□□□□□ -0.42
GFAP-216ENST00000589701 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
GFAP-216ENST00000589701 SHROOM1Q2M3G4 852 aaPredicted RBP12.44□□□□□ -0.42
GFAP-216ENST00000589701 NYAP1Q6ZVC0 841 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 NCAPGQ9BPX3 1015 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 RBM28Q9NW13 759 aaKnown RBP12.44□□□□□ -0.42
GFAP-216ENST00000589701 QSER1Q2KHR3 1735 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 ZBTB7AO95365 584 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 CCDC172P0C7W6 258 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 RASA1P20936 1047 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 CACNB3P54284 484 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 DHX8Q14562 1220 aaKnown RBP12.44□□□□□ -0.42
GFAP-216ENST00000589701 ZNF804AQ7Z570 1209 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 WDR66Q8TBY9 1149 aa12.44□□□□□ -0.42
GFAP-216ENST00000589701 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
GFAP-216ENST00000589701 GTF2F1P35269 517 aaKnown RBP eCLIP12.43□□□□□ -0.42
GFAP-216ENST00000589701 TNNT3P45378 269 aaPredicted RBP12.43□□□□□ -0.42
GFAP-216ENST00000589701 MAP2K1Q02750 393 aaPredicted RBP12.43□□□□□ -0.42
GFAP-216ENST00000589701 LRRC47Q8N1G4 583 aaKnown RBP12.43□□□□□ -0.42
GFAP-216ENST00000589701 LRRC15Q8TF66 581 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 BRMS1Q9HCU9 246 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 RSPH14Q9UHP6 348 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 CEP131Q9UPN4 1083 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 GDAQ9Y2T3 454 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 ERICH4A6NGS2 130 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 PTGER2P43116 358 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 RASSF8Q8NHQ8 419 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 GJA10Q969M2 543 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 CEP95Q96GE4 821 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 IRX2Q9BZI1 471 aaPredicted RBP12.43□□□□□ -0.42
GFAP-216ENST00000589701 GGA1Q9UJY5 639 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 CTNND2Q9UQB3 1225 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 KIAA1551Q9HCM1 1747 aa12.43□□□□□ -0.42
GFAP-216ENST00000589701 KLRF2D3W0D1 207 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 CALM1P0DP23 149 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 CALM2P0DP24 149 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 CALM3P0DP25 149 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 CDK8P49336 464 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 GSDMDP57764 484 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 SBK1Q52WX2 424 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 SPTY2D1Q68D10 685 aaPredicted RBP12.42□□□□□ -0.42
GFAP-216ENST00000589701 VSTM4Q8IW00 320 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 BLIDQ8IZY5 108 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 PDCL2Q8N4E4 241 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 TBC1D16Q8TBP0 767 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 EYA3Q99504 573 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 LY75O60449 1722 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 RGL2O15211 777 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 BAG3O95817 575 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 ERCC3P19447 782 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 ATP2C1P98194 919 aaPredicted RBP12.42□□□□□ -0.42
GFAP-216ENST00000589701 ATP2B2Q01814 1243 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 TMEM132AQ24JP5 1023 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 TOGARAM2Q6ZUX3 1019 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 GPATCH11Q8N954 259 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 BORCS6Q96GS4 357 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 NOL10Q9BSC4 688 aaKnown RBP12.42□□□□□ -0.42
GFAP-216ENST00000589701 PDGFDQ9GZP0 370 aaPredicted RBP12.42□□□□□ -0.42
GFAP-216ENST00000589701 DNAI1Q9UI46 699 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
GFAP-216ENST00000589701 FLT1P17948 1338 aa12.42□□□□□ -0.42
GFAP-216ENST00000589701 TRIM49BA6NDI0 452 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 RCAN1P53805 252 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 GPIHBP1Q8IV16 184 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
GFAP-216ENST00000589701 MTA3Q9BTC8 594 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 TSPYL1Q9H0U9 437 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 TMEM260Q9NX78 707 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 USP17L5A8MUK1 530 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 ZNF18P17022 549 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 LETM2Q2VYF4 491 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 HPS3Q969F9 1004 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 AKT1S1Q96B36 256 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 PSMD1Q99460 953 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 IMPACTQ9P2X3 320 aa12.41□□□□□ -0.42
GFAP-216ENST00000589701 BIN2Q9UBW5 565 aaPredicted RBP12.41□□□□□ -0.42
GFAP-216ENST00000589701 HOOK1Q9UJC3 728 aaKnown RBP12.41□□□□□ -0.42
GFAP-216ENST00000589701 PCDHA6Q9UN73 950 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms