RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 ZBED4O75132 1171 aa20.66■□□□□ 0.9
H3F3B-207ENST00000589417 INHAP05111 366 aa20.66■□□□□ 0.9
H3F3B-207ENST00000589417 GJB1P08034 283 aa20.66■□□□□ 0.9
H3F3B-207ENST00000589417 CYP2B6P20813 491 aa20.66■□□□□ 0.9
H3F3B-207ENST00000589417 PLS1Q14651 629 aa20.66■□□□□ 0.9
H3F3B-207ENST00000589417 MAP3K21Q5TCX8 1036 aa20.66■□□□□ 0.9
H3F3B-207ENST00000589417 TRIB2Q92519 343 aa20.66■□□□□ 0.9
H3F3B-207ENST00000589417 KIFC2Q96AC6 838 aa20.66■□□□□ 0.9
H3F3B-207ENST00000589417 CWC22Q9HCG8 908 aaKnown RBP20.66■□□□□ 0.9
H3F3B-207ENST00000589417 RBM8AQ9Y5S9 174 aaKnown RBP20.66■□□□□ 0.9
H3F3B-207ENST00000589417 PARP14Q460N5 1801 aa20.66■□□□□ 0.9
H3F3B-207ENST00000589417 BRCA2P51587 3418 aa20.65■□□□□ 0.9
H3F3B-207ENST00000589417 MYH4Q9Y623 1939 aa20.65■□□□□ 0.9
H3F3B-207ENST00000589417 PLXNB2O15031 1838 aa20.65■□□□□ 0.9
H3F3B-207ENST00000589417 CDC45O75419 566 aa20.65■□□□□ 0.9
H3F3B-207ENST00000589417 PDHBP11177 359 aa20.65■□□□□ 0.9
H3F3B-207ENST00000589417 CCL5P13501 91 aa20.65■□□□□ 0.9
H3F3B-207ENST00000589417 TRDNQ13061 729 aa20.65■□□□□ 0.9
H3F3B-207ENST00000589417 NECTIN1Q15223 517 aa20.65■□□□□ 0.9
H3F3B-207ENST00000589417 ENAHQ8N8S7 591 aaPredicted RBP20.65■□□□□ 0.9
H3F3B-207ENST00000589417 BIN2Q9UBW5 565 aaPredicted RBP20.65■□□□□ 0.9
H3F3B-207ENST00000589417 E7EWF7 191 aa20.64■□□□□ 0.89
H3F3B-207ENST00000589417 WDR78Q5VTH9 848 aa20.64■□□□□ 0.89
H3F3B-207ENST00000589417 CASC1Q6TDU7 716 aa20.64■□□□□ 0.89
H3F3B-207ENST00000589417 KCTD1Q719H9 257 aa20.64■□□□□ 0.89
H3F3B-207ENST00000589417 NCAPG2Q86XI2 1143 aa20.64■□□□□ 0.89
H3F3B-207ENST00000589417 ZKSCAN3Q9BRR0 538 aa20.64■□□□□ 0.89
H3F3B-207ENST00000589417 PAK6Q9NQU5 681 aaPredicted RBP20.64■□□□□ 0.89
H3F3B-207ENST00000589417 KIAA0100Q14667 2235 aaKnown RBP20.63■□□□□ 0.89
H3F3B-207ENST00000589417 FCER1AP12319 257 aa20.63■□□□□ 0.89
H3F3B-207ENST00000589417 ADORA2AP29274 412 aa20.63■□□□□ 0.89
H3F3B-207ENST00000589417 GJA8P48165 433 aa20.63■□□□□ 0.89
H3F3B-207ENST00000589417 SEC23AQ15436 765 aa20.63■□□□□ 0.89
H3F3B-207ENST00000589417 SAMD1Q6SPF0 538 aaPredicted RBP20.63■□□□□ 0.89
H3F3B-207ENST00000589417 PRR12Q9ULL5 1215 aa20.63■□□□□ 0.89
H3F3B-207ENST00000589417 TAF6LQ9Y6J9 622 aa20.63■□□□□ 0.89
H3F3B-207ENST00000589417 ZNF536O15090 1300 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 TNKSO95271 1327 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 RPTORQ8N122 1335 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 ZKSCAN1P17029 563 aaPredicted RBP20.62■□□□□ 0.89
H3F3B-207ENST00000589417 MLLT1Q03111 559 aaPredicted RBP20.62■□□□□ 0.89
H3F3B-207ENST00000589417 ZNF543Q08ER8 600 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 GPATCH4Q5T3I0 446 aaKnown RBP20.62■□□□□ 0.89
H3F3B-207ENST00000589417 OLFML2BQ68BL8 750 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 SNRNP48Q6IEG0 339 aaKnown RBP20.62■□□□□ 0.89
H3F3B-207ENST00000589417 STOX1Q6ZVD7 989 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 CYB5R4Q7L1T6 521 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 NCOA7Q8NI08 942 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 UBAC1Q9BSL1 405 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 MTA3Q9BTC8 594 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 RNF208Q9H0X6 261 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 UNC93B1Q9H1C4 597 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 SLC5A4Q9NY91 659 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 DIS3Q9Y2L1 958 aaKnown RBP20.62■□□□□ 0.89
H3F3B-207ENST00000589417 RIPK3Q9Y572 518 aa20.62■□□□□ 0.89
H3F3B-207ENST00000589417 COBLO75128 1261 aa20.61■□□□□ 0.89
H3F3B-207ENST00000589417 EN2P19622 333 aaPredicted RBP20.61■□□□□ 0.89
H3F3B-207ENST00000589417 CCL14Q16627 93 aa20.61■□□□□ 0.89
H3F3B-207ENST00000589417 RASGRP2Q7LDG7 609 aa20.61■□□□□ 0.89
H3F3B-207ENST00000589417 DPP9Q86TI2 863 aa20.61■□□□□ 0.89
H3F3B-207ENST00000589417 PNMA1Q8ND90 353 aa20.61■□□□□ 0.89
H3F3B-207ENST00000589417 CHST13Q8NET6 341 aa20.61■□□□□ 0.89
H3F3B-207ENST00000589417 NPLOC4Q8TAT6 608 aa20.61■□□□□ 0.89
H3F3B-207ENST00000589417 KAT14Q9H8E8 782 aa20.61■□□□□ 0.89
H3F3B-207ENST00000589417 RAVER2Q9HCJ3 691 aaKnown RBP20.61■□□□□ 0.89
H3F3B-207ENST00000589417 FBXO40Q9UH90 709 aa20.61■□□□□ 0.89
H3F3B-207ENST00000589417 CTDP1Q9Y5B0 961 aaPredicted RBP20.61■□□□□ 0.89
H3F3B-207ENST00000589417 ZNF236Q9UL36 1845 aa20.61■□□□□ 0.89
H3F3B-207ENST00000589417 RBBP6Q7Z6E9 1792 aaKnown RBP20.61■□□□□ 0.89
H3F3B-207ENST00000589417 SLC27A2O14975 620 aa20.6■□□□□ 0.89
H3F3B-207ENST00000589417 SGPL1O95470 568 aa20.6■□□□□ 0.89
H3F3B-207ENST00000589417 TRIM32Q13049 653 aa20.6■□□□□ 0.89
H3F3B-207ENST00000589417 TKFCQ3LXA3 575 aa20.6■□□□□ 0.89
H3F3B-207ENST00000589417 TTBK2Q6IQ55 1244 aa20.6■□□□□ 0.89
H3F3B-207ENST00000589417 MMP19Q99542 508 aa20.6■□□□□ 0.89
H3F3B-207ENST00000589417 CRISPLD2Q9H0B8 497 aa20.6■□□□□ 0.89
H3F3B-207ENST00000589417 RANBP17Q9H2T7 1088 aaKnown RBP20.6■□□□□ 0.89
H3F3B-207ENST00000589417 HMX1Q9NP08 348 aaPredicted RBP20.6■□□□□ 0.89
H3F3B-207ENST00000589417 ANO2Q9NQ90 1003 aa20.6■□□□□ 0.89
H3F3B-207ENST00000589417 FLRT1Q9NZU1 646 aa20.6■□□□□ 0.89
H3F3B-207ENST00000589417 DNAJC25-GNG10A0A024R161 153 aa20.59■□□□□ 0.89
H3F3B-207ENST00000589417 MYCP01106 439 aaPredicted RBP20.59■□□□□ 0.89
H3F3B-207ENST00000589417 CACNB2Q08289 660 aaPredicted RBP20.59■□□□□ 0.89
H3F3B-207ENST00000589417 IKQ13123 557 aaPredicted RBP20.59■□□□□ 0.89
H3F3B-207ENST00000589417 KCTD2Q14681 263 aa20.59■□□□□ 0.89
H3F3B-207ENST00000589417 CCDC96Q2M329 555 aa20.59■□□□□ 0.89
H3F3B-207ENST00000589417 ZNF792Q3KQV3 632 aa20.59■□□□□ 0.89
H3F3B-207ENST00000589417 TSGA10IPQ3SY00 556 aa20.59■□□□□ 0.89
H3F3B-207ENST00000589417 SYDE2Q5VT97 1194 aa20.59■□□□□ 0.89
H3F3B-207ENST00000589417 MFSD14CQ5VZR4 134 aa20.59■□□□□ 0.89
H3F3B-207ENST00000589417 CREB3L3Q68CJ9 461 aa20.59■□□□□ 0.89
H3F3B-207ENST00000589417 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
H3F3B-207ENST00000589417 MB21D2Q8IYB1 491 aaPredicted RBP20.59■□□□□ 0.89
H3F3B-207ENST00000589417 CPXCR1Q8N123 301 aa20.59■□□□□ 0.89
H3F3B-207ENST00000589417 U2AF1L4Q8WU68 220 aaKnown RBP20.59■□□□□ 0.89
H3F3B-207ENST00000589417 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.59■□□□□ 0.896e-12■■■□□ 15.4
H3F3B-207ENST00000589417 PNMA2Q9UL42 364 aa20.59■□□□□ 0.89
H3F3B-207ENST00000589417 PRKAR2AP13861 404 aaKnown RBP20.58■□□□□ 0.89
H3F3B-207ENST00000589417 IFIT1BQ5T764 474 aaKnown RBP20.58■□□□□ 0.89
H3F3B-207ENST00000589417 SHISA4Q96DD7 197 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms