RNA–Protein interactions for RNA: ENST00000583539.5

RAD51C-215, Transcript of RAD51 paralog C, human

APPRIS ALT2 TSL 2 BASIC

Gene RAD51C, Length 1,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51C-215	ENST00000583539	U2AF1L4	Q8WU68	220 aa	Known RBP	18.86	■□□□□ 0.61
RAD51C-215	ENST00000583539	NBPF3	Q9H094	633 aa		18.86	■□□□□ 0.61
RAD51C-215	ENST00000583539	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
RAD51C-215	ENST00000583539	PAK6	Q9NQU5	681 aa	Predicted RBP	18.86	■□□□□ 0.61
RAD51C-215	ENST00000583539	ZNF214	Q9UL59	606 aa	Predicted RBP	18.86	■□□□□ 0.61
RAD51C-215	ENST00000583539	TACC3	Q9Y6A5	838 aa		18.86	■□□□□ 0.61
RAD51C-215	ENST00000583539	TMEM232	C9JQI7	657 aa		18.85	■□□□□ 0.61
RAD51C-215	ENST00000583539	PRKAR2A	P13861	404 aa	Known RBP	18.85	■□□□□ 0.61
RAD51C-215	ENST00000583539	MCC	P23508	829 aa		18.85	■□□□□ 0.61
RAD51C-215	ENST00000583539	NOV	P48745	357 aa		18.85	■□□□□ 0.61
RAD51C-215	ENST00000583539	KCTD2	Q14681	263 aa		18.85	■□□□□ 0.61
RAD51C-215	ENST00000583539	DCAF4	Q8WV16	495 aa		18.85	■□□□□ 0.61
RAD51C-215	ENST00000583539	TTC14	Q96N46	770 aa		18.85	■□□□□ 0.61
RAD51C-215	ENST00000583539	KRT23	Q9C075	422 aa		18.85	■□□□□ 0.61
RAD51C-215	ENST00000583539	NEDD4	P46934	1319 aa		18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	ATP2A1	O14983	1001 aa		18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	SGPL1	O95470	568 aa		18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	OAZ1	P54368	228 aa		18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	CCDC96	Q2M329	555 aa		18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	SNRNP48	Q6IEG0	339 aa	Known RBP	18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	RCSD1	Q6JBY9	416 aa		18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	DEFB118	Q96PH6	123 aa		18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	MMP19	Q99542	508 aa		18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	SLC38A10	Q9HBR0	1119 aa		18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539		U3KPZ7	1027 aa	Predicted RBP	18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	BRCA2	P51587	3418 aa		18.84	■□□□□ 0.61
RAD51C-215	ENST00000583539	SGSM2	O43147	1006 aa		18.83	■□□□□ 0.61
RAD51C-215	ENST00000583539	PLA2G6	O60733	806 aa		18.83	■□□□□ 0.61
RAD51C-215	ENST00000583539	TFRC	P02786	760 aa	Known RBP	18.83	■□□□□ 0.61
RAD51C-215	ENST00000583539	TRDN	Q13061	729 aa		18.83	■□□□□ 0.61
RAD51C-215	ENST00000583539	KIAA1211	Q6ZU35	1233 aa		18.83	■□□□□ 0.61
RAD51C-215	ENST00000583539	REPS2	Q8NFH8	660 aa		18.83	■□□□□ 0.61
RAD51C-215	ENST00000583539	MTMR7	Q9Y216	660 aa		18.83	■□□□□ 0.61
RAD51C-215	ENST00000583539	KDM4A	O75164	1064 aa		18.82	■□□□□ 0.6
RAD51C-215	ENST00000583539	CCL14	Q16627	93 aa		18.82	■□□□□ 0.6
RAD51C-215	ENST00000583539	BMP2KL	Q5H9B9	411 aa		18.82	■□□□□ 0.6
RAD51C-215	ENST00000583539	MAP3K21	Q5TCX8	1036 aa		18.82	■□□□□ 0.6
RAD51C-215	ENST00000583539	OLFML2B	Q68BL8	750 aa		18.82	■□□□□ 0.6
RAD51C-215	ENST00000583539	CPXCR1	Q8N123	301 aa		18.82	■□□□□ 0.6
RAD51C-215	ENST00000583539	SHISA4	Q96DD7	197 aa		18.82	■□□□□ 0.6
RAD51C-215	ENST00000583539	TMEM47	Q9BQJ4	181 aa		18.82	■□□□□ 0.6
RAD51C-215	ENST00000583539	IL25	Q9H293	177 aa		18.82	■□□□□ 0.6
RAD51C-215	ENST00000583539	FBXO40	Q9UH90	709 aa		18.82	■□□□□ 0.6
RAD51C-215	ENST00000583539	CACNB2	Q08289	660 aa	Predicted RBP	18.81	■□□□□ 0.6
RAD51C-215	ENST00000583539	TRIM32	Q13049	653 aa		18.81	■□□□□ 0.6
RAD51C-215	ENST00000583539	PDE4DIP	Q5VU43	2346 aa		18.81	■□□□□ 0.6
RAD51C-215	ENST00000583539	CASC1	Q6TDU7	716 aa		18.81	■□□□□ 0.6
RAD51C-215	ENST00000583539	KCTD1	Q719H9	257 aa		18.81	■□□□□ 0.6
RAD51C-215	ENST00000583539	DGKH	Q86XP1	1220 aa		18.81	■□□□□ 0.6
RAD51C-215	ENST00000583539	UBAC1	Q9BSL1	405 aa		18.81	■□□□□ 0.6
RAD51C-215	ENST00000583539	ZNFX1	Q9P2E3	1918 aa	Known RBP	18.81	■□□□□ 0.6
RAD51C-215	ENST00000583539		B4E1Z4	1266 aa		18.8	■□□□□ 0.6
RAD51C-215	ENST00000583539	FARP2	O94887	1054 aa	Predicted RBP	18.8	■□□□□ 0.6
RAD51C-215	ENST00000583539	SLC4A3	P48751	1232 aa		18.8	■□□□□ 0.6
RAD51C-215	ENST00000583539	ANKLE1	Q8NAG6	615 aa		18.8	■□□□□ 0.6
RAD51C-215	ENST00000583539	CHST13	Q8NET6	341 aa		18.8	■□□□□ 0.6
RAD51C-215	ENST00000583539	NPLOC4	Q8TAT6	608 aa		18.8	■□□□□ 0.6
RAD51C-215	ENST00000583539	KAT14	Q9H8E8	782 aa		18.8	■□□□□ 0.6
RAD51C-215	ENST00000583539	RAVER2	Q9HCJ3	691 aa	Known RBP	18.8	■□□□□ 0.6
RAD51C-215	ENST00000583539	TNRC18	O15417	2968 aa	Predicted RBP	18.79	■□□□□ 0.6
RAD51C-215	ENST00000583539	MSC	O60682	206 aa		18.79	■□□□□ 0.6
RAD51C-215	ENST00000583539	RALYL	Q86SE5	291 aa	Known RBP	18.79	■□□□□ 0.6
RAD51C-215	ENST00000583539	CHMP4C	Q96CF2	233 aa		18.79	■□□□□ 0.6
RAD51C-215	ENST00000583539	DDX11	Q96FC9	970 aa		18.79	■□□□□ 0.6
RAD51C-215	ENST00000583539	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	18.79	■□□□□ 0.6
RAD51C-215	ENST00000583539	ZKSCAN3	Q9BRR0	538 aa		18.79	■□□□□ 0.6
RAD51C-215	ENST00000583539	HTATIP2	Q9BUP3	242 aa		18.79	■□□□□ 0.6
RAD51C-215	ENST00000583539	CRISPLD2	Q9H0B8	497 aa		18.79	■□□□□ 0.6
RAD51C-215	ENST00000583539	PLXNA1	Q9UIW2	1896 aa		18.79	■□□□□ 0.6
RAD51C-215	ENST00000583539	PDHB	P11177	359 aa		18.78	■□□□□ 0.6
RAD51C-215	ENST00000583539	TKFC	Q3LXA3	575 aa		18.78	■□□□□ 0.6
RAD51C-215	ENST00000583539	GPATCH4	Q5T3I0	446 aa	Known RBP	18.78	■□□□□ 0.6
RAD51C-215	ENST00000583539	MAML3	Q96JK9	1138 aa		18.78	■□□□□ 0.6
RAD51C-215	ENST00000583539	FLRT1	Q9NZU1	646 aa		18.78	■□□□□ 0.6
RAD51C-215	ENST00000583539	PRR12	Q9ULL5	1215 aa		18.78	■□□□□ 0.6
RAD51C-215	ENST00000583539	DIS3	Q9Y2L1	958 aa	Known RBP	18.78	■□□□□ 0.6
RAD51C-215	ENST00000583539	TNKS	O95271	1327 aa		18.78	■□□□□ 0.6
RAD51C-215	ENST00000583539	COBL	O75128	1261 aa		18.77	■□□□□ 0.6
RAD51C-215	ENST00000583539	CNGA1	P29973	690 aa		18.77	■□□□□ 0.6
RAD51C-215	ENST00000583539	PTH1R	Q03431	593 aa		18.77	■□□□□ 0.6
RAD51C-215	ENST00000583539	ANKRD35	Q8N283	1001 aa		18.77	■□□□□ 0.6
RAD51C-215	ENST00000583539	PNMA1	Q8ND90	353 aa		18.77	■□□□□ 0.6
RAD51C-215	ENST00000583539	ACAD9	Q9H845	621 aa		18.77	■□□□□ 0.6
RAD51C-215	ENST00000583539	ZSWIM5	Q9P217	1185 aa		18.77	■□□□□ 0.6
RAD51C-215	ENST00000583539	PNMA2	Q9UL42	364 aa		18.77	■□□□□ 0.6
RAD51C-215	ENST00000583539	FRMPD2	Q68DX3	1309 aa	Predicted RBP	18.77	■□□□□ 0.6
RAD51C-215	ENST00000583539	ERICH2	A1L162	156 aa		18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	CYP21A2	P08686	494 aa		18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	CCND3	P30281	292 aa	Predicted RBP	18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	CYP2C19	P33261	490 aa		18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	SART3	Q15020	963 aa	Known RBP	18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	SYDE2	Q5VT97	1194 aa		18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	PRPF38B	Q5VTL8	546 aa	Known RBP	18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	BTNL9	Q6UXG8	535 aa		18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	MAP4K1	Q92918	833 aa		18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	ESYT1	Q9BSJ8	1104 aa		18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	GPCPD1	Q9NPB8	672 aa		18.76	■□□□□ 0.59
RAD51C-215	ENST00000583539	PGK2	P07205	417 aa		18.75	■□□□□ 0.59
RAD51C-215	ENST00000583539	ZNF543	Q08ER8	600 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms