RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 UNC93B1Q9H1C4 597 aa11.58□□□□□ -0.56
TOP3A-211ENST00000581536 ARHGEF10LQ9HCE6 1279 aa11.58□□□□□ -0.56
TOP3A-211ENST00000581536 PDE4DIPQ5VU43 2346 aa11.58□□□□□ -0.56
TOP3A-211ENST00000581536 MCMDC2Q4G0Z9 681 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 DMRTA1Q5VZB9 504 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 ZNF589Q86UQ0 364 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-211ENST00000581536 CHMP4CQ96CF2 233 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 TANGO6Q9C0B7 1094 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 RNF208Q9H0X6 261 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 NAPBQ9H115 298 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 OSBPL3Q9H4L5 887 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 VCPKMTQ9H867 229 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 KANSL2Q9H9L4 492 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 HELLSQ9NRZ9 838 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 FBXO28Q9NVF7 368 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 CLIP2Q9UDT6 1046 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 DNAH12Q6ZR08 3092 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 SMCHD1A6NHR9 2005 aa11.57□□□□□ -0.56
TOP3A-211ENST00000581536 IGKV6D-41A0A0C4DH26 115 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 TK2O00142 265 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 RAD21O60216 631 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 FGAP02671 866 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 INHAP05111 366 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 SDSP20132 328 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 COL9A1P20849 921 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 PPARAQ07869 468 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 GPR142Q7Z601 462 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 NKX2-3Q8TAU0 364 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 PXYLP1Q8TE99 480 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 USP6NLQ92738 828 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 NUP88Q99567 741 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-211ENST00000581536 NACAP1Q9BZK3 213 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 HOXC10Q9NYD6 342 aa11.56□□□□□ -0.56
TOP3A-211ENST00000581536 F5H6K3 240 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 HSPD1P10809 573 aaKnown RBP11.55□□□□□ -0.56
TOP3A-211ENST00000581536 UBXN2AP68543 259 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 TFAP4Q01664 338 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 KLRC3Q07444 240 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 CCL14Q16627 93 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 MORN1Q5T089 497 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 WDR78Q5VTH9 848 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 LBX2Q6XYB7 198 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 PLEKHH3Q7Z736 793 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 CCAR1Q8IX12 1150 aaKnown RBP11.55□□□□□ -0.56
TOP3A-211ENST00000581536 SHISA4Q96DD7 197 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 ATG4CQ96DT6 458 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 CEP95Q96GE4 821 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 NYAP2Q9P242 653 aa11.55□□□□□ -0.56
TOP3A-211ENST00000581536 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 NMT2O60551 498 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 FLOT1O75955 427 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 MAPK4P31152 587 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 PLS1Q14651 629 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 ALX1Q15699 326 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 FAM83BQ5T0W9 1011 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 CWC27Q6UX04 472 aaKnown RBP11.54□□□□□ -0.56
TOP3A-211ENST00000581536 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
TOP3A-211ENST00000581536 NEDD1Q8NHV4 660 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 GTF3C2Q8WUA4 911 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-211ENST00000581536 TRIB2Q92519 343 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 LPAR1Q92633 364 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 NUDT12Q9BQG2 462 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 ZBED2Q9BTP6 218 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 MOV10L1Q9BXT6 1211 aaKnown RBP11.54□□□□□ -0.56
TOP3A-211ENST00000581536 IL17RBQ9NRM6 502 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 MTMR4Q9NYA4 1195 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 FLRT1Q9NZU1 646 aa11.54□□□□□ -0.56
TOP3A-211ENST00000581536 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 WDR46O15213 610 aaKnown RBP11.53□□□□□ -0.56
TOP3A-211ENST00000581536 SGPL1O95470 568 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 GJB1P08034 283 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 GJA8P48165 433 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 HAND2P61296 217 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 PDE4BQ07343 736 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 TMEM132BQ14DG7 1078 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 NPLOC4Q8TAT6 608 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 MKL1Q969V6 931 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 DEFB118Q96PH6 123 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 GOPCQ9HD26 462 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 ADAMTS5Q9UNA0 930 aa11.53□□□□□ -0.56
TOP3A-211ENST00000581536 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
TOP3A-211ENST00000581536 A0A0G2JMZ2 1700 aa11.52□□□□□ -0.56
TOP3A-211ENST00000581536 NDUFB10O96000 172 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 TFRCP02786 760 aaKnown RBP11.52□□□□□ -0.57
TOP3A-211ENST00000581536 TSPY3P0CV98 308 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 TSPY8P0CW00 308 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 GSPT1P15170 499 aaKnown RBP11.52□□□□□ -0.57
TOP3A-211ENST00000581536 ERCC3P19447 782 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 CACNB2Q08289 660 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-211ENST00000581536 MAP2K5Q13163 448 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 SKAP1Q86WV1 359 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 LRRC47Q8N1G4 583 aaKnown RBP11.52□□□□□ -0.57
TOP3A-211ENST00000581536 U2AF1L4Q8WU68 220 aaKnown RBP11.52□□□□□ -0.57
TOP3A-211ENST00000581536 NBPF3Q9H094 633 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 SPATC1LQ9H0A9 340 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 IL25Q9H293 177 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 SH2D4AQ9H788 454 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 CDHR5Q9HBB8 845 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 CWC22Q9HCG8 908 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms