RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 LRCH3Q96II8 777 aa25.12■■□□□ 1.61
CHRNB1-206ENST00000574054 PLIN4Q96Q06 1357 aa25.12■■□□□ 1.61
CHRNB1-206ENST00000574054 ZNFX1Q9P2E3 1918 aaKnown RBP25.12■■□□□ 1.61
CHRNB1-206ENST00000574054 RTP1P59025 263 aa25.11■■□□□ 1.61
CHRNB1-206ENST00000574054 MDM2Q00987 491 aaPredicted RBP25.11■■□□□ 1.61
CHRNB1-206ENST00000574054 SLFN13Q68D06 897 aa25.11■■□□□ 1.61
CHRNB1-206ENST00000574054 GMCL1P1Q8NEA9 526 aa25.11■■□□□ 1.61
CHRNB1-206ENST00000574054 TINF2Q9BSI4 451 aa25.11■■□□□ 1.61
CHRNB1-206ENST00000574054 NRBP1Q9UHY1 535 aa25.11■■□□□ 1.61
CHRNB1-206ENST00000574054 FEM1BQ9UK73 627 aa25.11■■□□□ 1.61
CHRNB1-206ENST00000574054 SYNPO2Q9UMS6 1093 aa25.11■■□□□ 1.61
CHRNB1-206ENST00000574054 DIS3Q9Y2L1 958 aaKnown RBP25.11■■□□□ 1.61
CHRNB1-206ENST00000574054 PDE1AP54750 535 aa25.1■■□□□ 1.61
CHRNB1-206ENST00000574054 CTDSPL2Q05D32 466 aa25.1■■□□□ 1.61
CHRNB1-206ENST00000574054 CHMP4CQ96CF2 233 aa25.1■■□□□ 1.61
CHRNB1-206ENST00000574054 DDX11Q96FC9 970 aa25.1■■□□□ 1.61
CHRNB1-206ENST00000574054 RAVER2Q9HCJ3 691 aaKnown RBP25.1■■□□□ 1.61
CHRNB1-206ENST00000574054 ATP11BQ9Y2G3 1177 aa25.1■■□□□ 1.61
CHRNB1-206ENST00000574054 RIPK3Q9Y572 518 aa25.1■■□□□ 1.61
CHRNB1-206ENST00000574054 FOXP2O15409 715 aa25.09■■□□□ 1.61
CHRNB1-206ENST00000574054 RARBP10826 455 aa25.09■■□□□ 1.61
CHRNB1-206ENST00000574054 BMP3P12645 472 aa25.09■■□□□ 1.61
CHRNB1-206ENST00000574054 TAL1P17542 331 aaPredicted RBP25.09■■□□□ 1.61
CHRNB1-206ENST00000574054 LRRC41Q15345 812 aa25.09■■□□□ 1.61
CHRNB1-206ENST00000574054 TDHQ8IZJ6 230 aa25.09■■□□□ 1.61
CHRNB1-206ENST00000574054 CNPY2Q9Y2B0 182 aa25.09■■□□□ 1.61
CHRNB1-206ENST00000574054 IKQ13123 557 aaPredicted RBP25.08■■□□□ 1.61
CHRNB1-206ENST00000574054 LBHD1Q9BQE6 289 aaPredicted RBP25.08■■□□□ 1.61
CHRNB1-206ENST00000574054 SLC38A10Q9HBR0 1119 aa25.08■■□□□ 1.61
CHRNB1-206ENST00000574054 XPNPEP3Q9NQH7 507 aa25.08■■□□□ 1.61
CHRNB1-206ENST00000574054 PRKAG2Q9UGJ0 569 aa25.08■■□□□ 1.61
CHRNB1-206ENST00000574054 TSPY2A6NKD2 308 aa25.07■■□□□ 1.6
CHRNB1-206ENST00000574054 ADCYAP1R1P41586 468 aa25.07■■□□□ 1.6
CHRNB1-206ENST00000574054 VPS53Q5VIR6 699 aa25.07■■□□□ 1.6
CHRNB1-206ENST00000574054 FERMT2Q96AC1 680 aa25.07■■□□□ 1.6
CHRNB1-206ENST00000574054 INCENPQ9NQS7 918 aa25.07■■□□□ 1.6
CHRNB1-206ENST00000574054 STX8Q9UNK0 236 aa25.07■■□□□ 1.6
CHRNB1-206ENST00000574054 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.07■■□□□ 1.6
CHRNB1-206ENST00000574054 PLXNA1Q9UIW2 1896 aa25.06■■□□□ 1.6
CHRNB1-206ENST00000574054 TMEM232C9JQI7 657 aa25.06■■□□□ 1.6
CHRNB1-206ENST00000574054 ATP2A1O14983 1001 aa25.06■■□□□ 1.6
CHRNB1-206ENST00000574054 PPP4R3BQ5MIZ7 849 aa25.06■■□□□ 1.6
CHRNB1-206ENST00000574054 SLC39A5Q6ZMH5 540 aa25.06■■□□□ 1.6
CHRNB1-206ENST00000574054 LNPKQ9C0E8 428 aa25.06■■□□□ 1.6
CHRNB1-206ENST00000574054 HELLSQ9NRZ9 838 aa25.06■■□□□ 1.6
CHRNB1-206ENST00000574054 LAMA2P24043 3122 aaKnown RBP25.06■■□□□ 1.6
CHRNB1-206ENST00000574054 RANBP6O60518 1105 aaKnown RBP25.05■■□□□ 1.6
CHRNB1-206ENST00000574054 PGK1P00558 417 aa25.05■■□□□ 1.6
CHRNB1-206ENST00000574054 SLC1A4P43007 532 aa25.05■■□□□ 1.6
CHRNB1-206ENST00000574054 ANKRD35Q8N283 1001 aa25.05■■□□□ 1.6
CHRNB1-206ENST00000574054 LENG1Q96BZ8 264 aaPredicted RBP25.05■■□□□ 1.6
CHRNB1-206ENST00000574054 FAM227BQ96M60 508 aa25.05■■□□□ 1.6
CHRNB1-206ENST00000574054 HOMER2Q9NSB8 354 aa25.05■■□□□ 1.6
CHRNB1-206ENST00000574054 SMCHD1A6NHR9 2005 aa25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 A0A0D9SFI3 127 aa25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 NMT2O60551 498 aa25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 ZNF865P0CJ78 1059 aaPredicted RBP25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 AKR1A1P14550 325 aa25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 MCCP23508 829 aa25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 STAT2P52630 851 aa25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 TRIM60Q495X7 471 aa25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 RNF180Q86T96 592 aa25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 GMCL1Q96IK5 515 aa25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 PRDM5Q9NQX1 630 aaPredicted RBP25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 FBXO40Q9UH90 709 aa25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 ZHX1Q9UKY1 873 aaPredicted RBP25.04■■□□□ 1.6
CHRNB1-206ENST00000574054 DNAJC25-GNG10A0A024R161 153 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 TRIM6-TRIM34B2RNG4 842 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 OAZ1P54368 228 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 LRIT3Q3SXY7 679 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 B4GALNT3Q6L9W6 998 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 FAM160B2Q86V87 743 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 MSL3Q8N5Y2 521 aaKnown RBP25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 CHST13Q8NET6 341 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 CHURC1Q8WUH1 139 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 TOMM22Q9NS69 142 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 ANAPC4Q9UJX5 808 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 MTMR7Q9Y216 660 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 SYNGAP1Q96PV0 1343 aa25.03■■□□□ 1.6
CHRNB1-206ENST00000574054 ALX1Q15699 326 aa25.02■■□□□ 1.6
CHRNB1-206ENST00000574054 MCMDC2Q4G0Z9 681 aa25.02■■□□□ 1.6
CHRNB1-206ENST00000574054 STAG1Q8WVM7 1258 aa25.02■■□□□ 1.6
CHRNB1-206ENST00000574054 RILPL2Q969X0 211 aa25.02■■□□□ 1.6
CHRNB1-206ENST00000574054 RWDD1Q9H446 243 aaPredicted RBP25.02■■□□□ 1.6
CHRNB1-206ENST00000574054 IL17RBQ9NRM6 502 aa25.02■■□□□ 1.6
CHRNB1-206ENST00000574054 TACC3Q9Y6A5 838 aa25.02■■□□□ 1.6
CHRNB1-206ENST00000574054 SNAI1O95863 264 aaPredicted RBP25.01■■□□□ 1.59
CHRNB1-206ENST00000574054 FDX1P10109 184 aa25.01■■□□□ 1.59
CHRNB1-206ENST00000574054 AAMPQ13685 434 aa25.01■■□□□ 1.59
CHRNB1-206ENST00000574054 KCTD1Q719H9 257 aa25.01■■□□□ 1.59
CHRNB1-206ENST00000574054 PHF24Q9UPV7 400 aa25.01■■□□□ 1.59
CHRNB1-206ENST00000574054 NMIQ13287 307 aaPredicted RBP25■■□□□ 1.59
CHRNB1-206ENST00000574054 SNX17Q15036 470 aa25■■□□□ 1.59
CHRNB1-206ENST00000574054 RRP12Q5JTH9 1297 aaKnown RBP25■■□□□ 1.59
CHRNB1-206ENST00000574054 MAMDC4Q6UXC1 1216 aa25■■□□□ 1.59
CHRNB1-206ENST00000574054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25■■□□□ 1.59
CHRNB1-206ENST00000574054 ZNF467Q7Z7K2 595 aaPredicted RBP25■■□□□ 1.59
CHRNB1-206ENST00000574054 AGBL1Q96MI9 1066 aa25■■□□□ 1.59
CHRNB1-206ENST00000574054 ACAD9Q9H845 621 aa25■■□□□ 1.59
CHRNB1-206ENST00000574054 FAM184BQ9ULE4 1060 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms