RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 LNPKQ9C0E8 428 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 RWDD1Q9H446 243 aaPredicted RBP14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 MROH8Q9H579 483 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 NYAP2Q9P242 653 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 OGDHLQ9ULD0 1010 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 MYH8P13535 1937 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 EVI5O60447 810 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 TSPY3P0CV98 308 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 TSPY8P0CW00 308 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 CCND3P30281 292 aaPredicted RBP14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 PPARAQ07869 468 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 CCDC129Q6ZRS4 1044 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 EFCAB3Q8N7B9 438 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 NBPF3Q9H094 633 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 FBXO28Q9NVF7 368 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 SLC5A4Q9NY91 659 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 FLRT1Q9NZU1 646 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 PPP1R9AQ9ULJ8 1098 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 A0A0G2JMZ2 1700 aa14.71□□□□□ -0.05
CTDNEP1-205ENST00000570828 IGKV6D-41A0A0C4DH26 115 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 SLC25A27O95847 323 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 NDUFB10O96000 172 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 TMEM132BQ14DG7 1078 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 ABRAQ8N0Z2 381 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 NPLOC4Q8TAT6 608 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 CEP95Q96GE4 821 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 NUP88Q99567 741 aaPredicted RBP14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 SLF1Q9BQI6 1058 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 C11orf49Q9H6J7 331 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 CLIP2Q9UDT6 1046 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 PLIN4Q96Q06 1357 aa14.7□□□□□ -0.06
CTDNEP1-205ENST00000570828 F5H6K3 240 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 VWA5AO00534 786 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 TTLL1O95922 423 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 FCER1AP12319 257 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 CYP2C19P33261 490 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 COPB2P35606 906 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 KLRC3Q07444 240 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 OLFML2BQ68BL8 750 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 B4GALNT3Q6L9W6 998 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 RIOX2Q8IUF8 465 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 SMC5Q8IY18 1101 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 EXOC6Q8TAG9 804 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 HELLSQ9NRZ9 838 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 MTMR4Q9NYA4 1195 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 SYNPO2Q9UMS6 1093 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 ADAMTS5Q9UNA0 930 aa14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 RANBP2P49792 3224 aaKnown RBP14.69□□□□□ -0.06
CTDNEP1-205ENST00000570828 TRIM6-TRIM34B2RNG4 842 aa14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 MSCO60682 206 aa14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 CNGA1P29973 690 aa14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 FAM47AQ5JRC9 791 aa14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 CHD1LQ86WJ1 897 aa14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 TICAM2Q86XR7 235 aa14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 ZNF687Q8N1G0 1237 aa14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 LRRC47Q8N1G4 583 aaKnown RBP14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 NEDD1Q8NHV4 660 aa14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 MMP19Q99542 508 aa14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 DDX20Q9UHI6 824 aaKnown RBP14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 CTDP1Q9Y5B0 961 aaPredicted RBP14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 ZNF236Q9UL36 1845 aa14.68□□□□□ -0.06
CTDNEP1-205ENST00000570828 GREB1LQ9C091 1923 aaPredicted RBP14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 FOXP2O15409 715 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 COBLO75128 1261 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 CYBAP13498 195 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 STAT3P40763 770 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 TFAP4Q01664 338 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 KCTD2Q14681 263 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 PPP4R3BQ5MIZ7 849 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 VPS53Q5VIR6 699 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 MKL1Q969V6 931 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 FAM227BQ96M60 508 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 TEX13BQ9BXU2 312 aa14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 ZNF214Q9UL59 606 aaPredicted RBP14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 ISY1Q9ULR0 285 aaKnown RBP14.67□□□□□ -0.06
CTDNEP1-205ENST00000570828 RLFQ13129 1914 aa14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 A0A0D9SFI3 127 aa14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 TSPY2A6NKD2 308 aa14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 NUCB1Q02818 461 aa14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 MCMDC2Q4G0Z9 681 aa14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 C7orf61Q8IZ16 206 aa14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 PRPF38AQ8NAV1 312 aaKnown RBP14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 GMCL1P1Q8NEA9 526 aa14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 REPS2Q8NFH8 660 aa14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 RILPL2Q969X0 211 aa14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 KIFC2Q96AC6 838 aa14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.66□□□□□ -0.06
CTDNEP1-205ENST00000570828 ZBED4O75132 1171 aa14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 IGHA2P01877 340 aa14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 IGHDP01880 384 aa14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 CTDSPL2Q05D32 466 aa14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 SLFN13Q68D06 897 aa14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 SNRNP48Q6IEG0 339 aaKnown RBP14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 TRPV1Q8NER1 839 aa14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 MAML3Q96JK9 1138 aa14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 ANAPC4Q9UJX5 808 aa14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 FEM1BQ9UK73 627 aa14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 STX8Q9UNK0 236 aa14.65□□□□□ -0.06
CTDNEP1-205ENST00000570828 PFASO15067 1338 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms