RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 STX8Q9UNK0 236 aa14.52□□□□□ -0.09
GTF3C1-208ENST00000567843 ALPK3Q96L96 1907 aa14.52□□□□□ -0.09
GTF3C1-208ENST00000567843 TSPY2A6NKD2 308 aa14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 RANBP6O60518 1105 aaKnown RBP14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 BMP3P12645 472 aa14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 TAL1P17542 331 aaPredicted RBP14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 MCCP23508 829 aa14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 SNAP25P60880 206 aa14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 IRX6P78412 446 aaPredicted RBP14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 RRP12Q5JTH9 1297 aaKnown RBP14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 ZNF589Q86UQ0 364 aaPredicted RBP14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 SMC5Q8IY18 1101 aa14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 HELLSQ9NRZ9 838 aa14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 SUPT16HQ9Y5B9 1047 aaKnown RBP14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 GREB1LQ9C091 1923 aaPredicted RBP14.51□□□□□ -0.09
GTF3C1-208ENST00000567843 TMEM232C9JQI7 657 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 FGAP02671 866 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 HAND2P61296 217 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 IKQ13123 557 aaPredicted RBP14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 ZNF792Q3KQV3 632 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 MCMDC2Q4G0Z9 681 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 CHD1LQ86WJ1 897 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 FERMT2Q96AC1 680 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 LENG1Q96BZ8 264 aaPredicted RBP14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 DDX11Q96FC9 970 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 TEX13BQ9BXU2 312 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 IL17RBQ9NRM6 502 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 HOMER2Q9NSB8 354 aa14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 COL11A1P12107 1806 aaPredicted RBP14.5□□□□□ -0.09
GTF3C1-208ENST00000567843 SEPT4O43236 478 aa14.49□□□□□ -0.09
GTF3C1-208ENST00000567843 MSCO60682 206 aa14.49□□□□□ -0.09
GTF3C1-208ENST00000567843 MAGEA10P43363 369 aaPredicted RBP14.49□□□□□ -0.09
GTF3C1-208ENST00000567843 KCTD1Q719H9 257 aa14.49□□□□□ -0.09
GTF3C1-208ENST00000567843 PLEKHM2Q8IWE5 1019 aa14.49□□□□□ -0.09
GTF3C1-208ENST00000567843 GMCL1P1Q8NEA9 526 aa14.49□□□□□ -0.09
GTF3C1-208ENST00000567843 TINF2Q9BSI4 451 aa14.49□□□□□ -0.09
GTF3C1-208ENST00000567843 FEM1BQ9UK73 627 aa14.49□□□□□ -0.09
GTF3C1-208ENST00000567843 PLIN4Q96Q06 1357 aa14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 PARP14Q460N5 1801 aa14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 DNM1LO00429 736 aa14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 SOX1O00570 391 aaPredicted RBP14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 HSPD1P10809 573 aaKnown RBP14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 SLC1A4P43007 532 aa14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 MDM2Q00987 491 aaPredicted RBP14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 NUCB1Q02818 461 aa14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 ARRDC4Q8NCT1 418 aa14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 GDF15Q99988 308 aa14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 SLC38A10Q9HBR0 1119 aa14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 ATP11BQ9Y2G3 1177 aa14.48□□□□□ -0.09
GTF3C1-208ENST00000567843 KBTBD13C9JR72 458 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 PGK1P00558 417 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 SDSP20132 328 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 COPB2P35606 906 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 ADCYAP1R1P41586 468 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 ALX1Q15699 326 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 CCDC174Q6PII3 467 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 ANKRD35Q8N283 1001 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 LRCH3Q96II8 777 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 AGBL1Q96MI9 1066 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 ANAPC4Q9UJX5 808 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 SZT2Q5T011 3432 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 MYH4Q9Y623 1939 aa14.47□□□□□ -0.09
GTF3C1-208ENST00000567843 CCDC171Q6TFL3 1326 aa14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 ZNF236Q9UL36 1845 aa14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 ZNF865P0CJ78 1059 aaPredicted RBP14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 STAT2P52630 851 aa14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 RTP1P59025 263 aa14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 AAMPQ13685 434 aa14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 LRRC41Q15345 812 aa14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 CCDC96Q2M329 555 aa14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 CWC27Q6UX04 472 aaKnown RBP14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 STAG1Q8WVM7 1258 aa14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 XPNPEP3Q9NQH7 507 aa14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 ZHX1Q9UKY1 873 aaPredicted RBP14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 ZNFX1Q9P2E3 1918 aaKnown RBP14.46□□□□□ -0.09
GTF3C1-208ENST00000567843 SMCHD1A6NHR9 2005 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 ATP2A1O14983 1001 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 ORC4O43929 436 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 SNAI1O95863 264 aaPredicted RBP14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 RARBP10826 455 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 ALAS1P13196 640 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 SLC16A2P36021 539 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 IRX5P78411 483 aaPredicted RBP14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 CNTN2Q02246 1040 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 TTBK2Q6IQ55 1244 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 RCSD1Q6JBY9 416 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 CHURC1Q8WUH1 139 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 GMCL1Q96IK5 515 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 UBE2OQ9C0C9 1292 aaKnown RBP14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 GPCPD1Q9NPB8 672 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 SYNPO2Q9UMS6 1093 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 CNPY2Q9Y2B0 182 aa14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 DIS3Q9Y2L1 958 aaKnown RBP14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 DDX49Q9Y6V7 483 aaKnown RBP14.45□□□□□ -0.1
GTF3C1-208ENST00000567843 LAMA3Q16787 3333 aa14.44□□□□□ -0.1
GTF3C1-208ENST00000567843 ZNF536O15090 1300 aa14.44□□□□□ -0.1
GTF3C1-208ENST00000567843 FRMPD2Q68DX3 1309 aaPredicted RBP14.44□□□□□ -0.1
GTF3C1-208ENST00000567843 DNAJC25-GNG10A0A024R161 153 aa14.44□□□□□ -0.1
GTF3C1-208ENST00000567843 TRIM60Q495X7 471 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms