RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 HMGCRP04035 888 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 INHAP05111 366 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 HOXC6P09630 235 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 TRDNQ13061 729 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 MTFR1Q15390 333 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 CASC1Q6TDU7 716 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 NCAPG2Q86XI2 1143 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 KIFC2Q96AC6 838 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 APBA2Q99767 749 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 TEX13BQ9BXU2 312 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 LSG1Q9H089 658 aaKnown RBP18.15■□□□□ 0.5
COMMD4-212ENST00000565517 SLC38A10Q9HBR0 1119 aa18.15■□□□□ 0.5
COMMD4-212ENST00000565517 CDC45O75419 566 aa18.14■□□□□ 0.49
COMMD4-212ENST00000565517 CCL5P13501 91 aa18.14■□□□□ 0.49
COMMD4-212ENST00000565517 OAZ1P54368 228 aa18.14■□□□□ 0.49
COMMD4-212ENST00000565517 ZSCAN10Q96SZ4 725 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-212ENST00000565517 ZKSCAN3Q9BRR0 538 aa18.14■□□□□ 0.49
COMMD4-212ENST00000565517 CTDP1Q9Y5B0 961 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-212ENST00000565517 RBM8AQ9Y5S9 174 aaKnown RBP18.14■□□□□ 0.49
COMMD4-212ENST00000565517 GJB1P08034 283 aa18.13■□□□□ 0.49
COMMD4-212ENST00000565517 CAPN2P17655 700 aa18.13■□□□□ 0.49
COMMD4-212ENST00000565517 MLLT1Q03111 559 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-212ENST00000565517 BTNL9Q6UXG8 535 aa18.13■□□□□ 0.49
COMMD4-212ENST00000565517 KCTD1Q719H9 257 aa18.13■□□□□ 0.49
COMMD4-212ENST00000565517 TRIB2Q92519 343 aa18.13■□□□□ 0.49
COMMD4-212ENST00000565517 RNF208Q9H0X6 261 aa18.13■□□□□ 0.49
COMMD4-212ENST00000565517 PLXNA1Q9UIW2 1896 aa18.12■□□□□ 0.49
COMMD4-212ENST00000565517 E7EWF7 191 aa18.12■□□□□ 0.49
COMMD4-212ENST00000565517 MYCP01106 439 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-212ENST00000565517 SNHG28P0DPA3 235 aa18.12■□□□□ 0.49
COMMD4-212ENST00000565517 PDHBP11177 359 aa18.12■□□□□ 0.49
COMMD4-212ENST00000565517 FCER1AP12319 257 aa18.12■□□□□ 0.49
COMMD4-212ENST00000565517 ZKSCAN1P17029 563 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-212ENST00000565517 ADORA2AP29274 412 aa18.12■□□□□ 0.49
COMMD4-212ENST00000565517 IKQ13123 557 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-212ENST00000565517 ENAHQ8N8S7 591 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-212ENST00000565517 NCOA7Q8NI08 942 aa18.12■□□□□ 0.49
COMMD4-212ENST00000565517 UBAC1Q9BSL1 405 aa18.12■□□□□ 0.49
COMMD4-212ENST00000565517 SLC5A4Q9NY91 659 aa18.12■□□□□ 0.49
COMMD4-212ENST00000565517 ISY1Q9ULR0 285 aaKnown RBP18.12■□□□□ 0.49
COMMD4-212ENST00000565517 EN2P19622 333 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-212ENST00000565517 CCDC96Q2M329 555 aa18.11■□□□□ 0.49
COMMD4-212ENST00000565517 MAP3K21Q5TCX8 1036 aa18.11■□□□□ 0.49
COMMD4-212ENST00000565517 SNRNP48Q6IEG0 339 aaKnown RBP18.11■□□□□ 0.49
COMMD4-212ENST00000565517 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.11■□□□□ 0.49
COMMD4-212ENST00000565517 DPP9Q86TI2 863 aa18.11■□□□□ 0.49
COMMD4-212ENST00000565517 CPXCR1Q8N123 301 aa18.11■□□□□ 0.49
COMMD4-212ENST00000565517 UNC93B1Q9H1C4 597 aa18.11■□□□□ 0.49
COMMD4-212ENST00000565517 KAT14Q9H8E8 782 aa18.11■□□□□ 0.49
COMMD4-212ENST00000565517 ANO2Q9NQ90 1003 aa18.11■□□□□ 0.49
COMMD4-212ENST00000565517 PAK6Q9NQU5 681 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-212ENST00000565517 MTMR7Q9Y216 660 aa18.11■□□□□ 0.49
COMMD4-212ENST00000565517 TNKSO95271 1327 aa18.11■□□□□ 0.49
COMMD4-212ENST00000565517 RPTORQ8N122 1335 aa18.11■□□□□ 0.49
COMMD4-212ENST00000565517 BRCA2P51587 3418 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 IGHA2P01877 340 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 GJA8P48165 433 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 ZNF543Q08ER8 600 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 NECTIN1Q15223 517 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 SEC23AQ15436 765 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 CCL14Q16627 93 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 GPATCH4Q5T3I0 446 aaKnown RBP18.1■□□□□ 0.49
COMMD4-212ENST00000565517 CYB5R4Q7L1T6 521 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 RALYLQ86SE5 291 aaKnown RBP18.1■□□□□ 0.49
COMMD4-212ENST00000565517 PNMA1Q8ND90 353 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 NPLOC4Q8TAT6 608 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 CHMP4CQ96CF2 233 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 MMP19Q99542 508 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 RAVER2Q9HCJ3 691 aaKnown RBP18.1■□□□□ 0.49
COMMD4-212ENST00000565517 HMX1Q9NP08 348 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-212ENST00000565517 PRR12Q9ULL5 1215 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 RIPK3Q9Y572 518 aa18.1■□□□□ 0.49
COMMD4-212ENST00000565517 COBLO75128 1261 aa18.09■□□□□ 0.49
COMMD4-212ENST00000565517 TRIM32Q13049 653 aa18.09■□□□□ 0.49
COMMD4-212ENST00000565517 KCTD2Q14681 263 aa18.09■□□□□ 0.49
COMMD4-212ENST00000565517 IFIT1BQ5T764 474 aaKnown RBP18.09■□□□□ 0.49
COMMD4-212ENST00000565517 OLFML2BQ68BL8 750 aa18.09■□□□□ 0.49
COMMD4-212ENST00000565517 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
COMMD4-212ENST00000565517 STOX1Q6ZVD7 989 aa18.09■□□□□ 0.49
COMMD4-212ENST00000565517 RASGRP2Q7LDG7 609 aa18.09■□□□□ 0.49
COMMD4-212ENST00000565517 CHST13Q8NET6 341 aa18.09■□□□□ 0.49
COMMD4-212ENST00000565517 FBXO40Q9UH90 709 aa18.09■□□□□ 0.49
COMMD4-212ENST00000565517 DIS3Q9Y2L1 958 aaKnown RBP18.09■□□□□ 0.49
COMMD4-212ENST00000565517 TAF6LQ9Y6J9 622 aa18.09■□□□□ 0.49
COMMD4-212ENST00000565517 SMCHD1A6NHR9 2005 aa18.08■□□□□ 0.49
COMMD4-212ENST00000565517 ZNF536O15090 1300 aa18.08■□□□□ 0.49
COMMD4-212ENST00000565517 SLC27A2O14975 620 aa18.08■□□□□ 0.48
COMMD4-212ENST00000565517 SGPL1O95470 568 aa18.08■□□□□ 0.48
COMMD4-212ENST00000565517 CACNB2Q08289 660 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-212ENST00000565517 TKFCQ3LXA3 575 aa18.08■□□□□ 0.48
COMMD4-212ENST00000565517 SYDE2Q5VT97 1194 aa18.08■□□□□ 0.48
COMMD4-212ENST00000565517 MFSD14CQ5VZR4 134 aa18.08■□□□□ 0.48
COMMD4-212ENST00000565517 CREB3L3Q68CJ9 461 aa18.08■□□□□ 0.48
COMMD4-212ENST00000565517 MTA3Q9BTC8 594 aa18.08■□□□□ 0.48
COMMD4-212ENST00000565517 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.08■□□□□ 0.48
COMMD4-212ENST00000565517 RANBP17Q9H2T7 1088 aaKnown RBP18.08■□□□□ 0.48
COMMD4-212ENST00000565517 GPCPD1Q9NPB8 672 aa18.08■□□□□ 0.48
COMMD4-212ENST00000565517 FLRT1Q9NZU1 646 aa18.08■□□□□ 0.48
COMMD4-212ENST00000565517 FRMPD2Q68DX3 1309 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms