RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SNAI1O95863 264 aaPredicted RBP11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 ACTN1P12814 892 aa11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 MCAMP43121 646 aa11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 GRB10Q13322 594 aa11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 ACVR2BQ13705 512 aa11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 POTEBQ6S5H4 581 aa11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 SLC43A3Q8NBI5 491 aa11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 NOC4LQ9BVI4 516 aaKnown RBP11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 SMCHD1A6NHR9 2005 aa11.02□□□□□ -0.64
VPS9D1-205ENST00000565452 MYH13Q9UKX3 1938 aa11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 A0A1W2PRG0 241 aa11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 EPOPA6NHQ4 379 aa11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 GUCY1A2P33402 732 aa11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 DYNLL1P63167 89 aaKnown RBP11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 TAP1Q03518 808 aa11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 PUS10Q3MIT2 529 aaKnown RBP11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 LEXMQ3ZCV2 418 aa11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 MAMDC4Q6UXC1 1216 aa11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 ADGRA1Q86SQ6 560 aa11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 UPF3AQ9H1J1 476 aaKnown RBP11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 ADAMTS5Q9UNA0 930 aa11.02□□□□□ -0.65
VPS9D1-205ENST00000565452 CACNA1AO00555 2505 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 ATAD5Q96QE3 1844 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 ZEB2O60315 1214 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 POLR3DP05423 398 aaPredicted RBP11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 CYP7A1P22680 504 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 SHMT1P34896 483 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 ITGA7Q13683 1181 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 TTLL4Q14679 1199 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 CCDC144BQ3MJ40 725 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 CCDC158Q5M9N0 1113 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 ZNF467Q7Z7K2 595 aaPredicted RBP11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 SLC9A7Q96T83 725 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 ABHD16BQ9H3Z7 469 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 SH2D4AQ9H788 454 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 UBE2ZQ9H832 354 aaPredicted RBP11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 ARHGEF10LQ9HCE6 1279 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 SNRKQ9NRH2 765 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 UMODL1Q5DID0 1318 aa11.01□□□□□ -0.65
VPS9D1-205ENST00000565452 SUPT20HL2P0C7V6 817 aa11□□□□□ -0.65
VPS9D1-205ENST00000565452 PLCD1P51178 756 aa11□□□□□ -0.65
VPS9D1-205ENST00000565452 NKX3-2P78367 333 aa11□□□□□ -0.65
VPS9D1-205ENST00000565452 TTC39AQ5SRH9 613 aa11□□□□□ -0.65
VPS9D1-205ENST00000565452 PTCRAQ6ISU1 281 aaPredicted RBP11□□□□□ -0.65
VPS9D1-205ENST00000565452 NOL8Q76FK4 1167 aaKnown RBP11□□□□□ -0.65
VPS9D1-205ENST00000565452 FAM9BQ8IZU0 186 aa11□□□□□ -0.65
VPS9D1-205ENST00000565452 SPICE1Q8N0Z3 855 aa11□□□□□ -0.65
VPS9D1-205ENST00000565452 GADD45GIP1Q8TAE8 222 aaPredicted RBP11□□□□□ -0.65
VPS9D1-205ENST00000565452 SCLYQ96I15 445 aa11□□□□□ -0.65
VPS9D1-205ENST00000565452 UPF3BQ9BZI7 483 aaKnown RBP11□□□□□ -0.65
VPS9D1-205ENST00000565452 TRPV6Q9H1D0 765 aa11□□□□□ -0.65
VPS9D1-205ENST00000565452 WNT8AQ9H1J5 351 aa11□□□□□ -0.65
VPS9D1-205ENST00000565452 REV3LO60673 3130 aa11□□□□□ -0.65
VPS9D1-205ENST00000565452 GRXCR2A6NFK2 248 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 VWA5AO00534 786 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 WDR46O15213 610 aaKnown RBP10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 SRGAP3O43295 1099 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 CYP2E1P05181 493 aaPredicted RBP10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 KCNA5P22460 613 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 G3BP1Q13283 466 aaKnown RBP eCLIP10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 KIAA1755Q5JYT7 1200 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 CXCL17Q6UXB2 119 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 TMEM179Q6ZVK1 233 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 DEFB128Q7Z7B8 93 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 HERC6Q8IVU3 1022 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 AGBL1Q96MI9 1066 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 PRRX2Q99811 253 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 AP5M1Q9H0R1 490 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 VCPKMTQ9H867 229 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 FAM50BQ9Y247 325 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 TMX2Q9Y320 296 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 ZNF536O15090 1300 aa10.99□□□□□ -0.65
VPS9D1-205ENST00000565452 ZNF236Q9UL36 1845 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 TRANK1O15050 2925 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 B4GALT4O60513 344 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 LPXNO60711 386 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 RFC2P35250 354 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 PTPN5P54829 565 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 BEX3Q00994 111 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 TNFAIP2Q03169 654 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 HFE2Q6ZVN8 426 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 MAGEB6Q8N7X4 407 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 MIGA1Q8NAN2 632 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 SSH1Q8WYL5 1049 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 VWCEQ96DN2 955 aa10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 FTOQ9C0B1 505 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPS9D1-205ENST00000565452 DNAJC25-GNG10A0A024R161 153 aa10.97□□□□□ -0.65
VPS9D1-205ENST00000565452 CTAGE5O15320 804 aa10.97□□□□□ -0.65
VPS9D1-205ENST00000565452 IL9P15248 144 aa10.97□□□□□ -0.65
VPS9D1-205ENST00000565452 PKN1Q16512 942 aa10.97□□□□□ -0.65
VPS9D1-205ENST00000565452 TMED8Q6PL24 325 aaPredicted RBP10.97□□□□□ -0.65
VPS9D1-205ENST00000565452 RETREG2Q8NC44 543 aa10.97□□□□□ -0.65
VPS9D1-205ENST00000565452 PHOX2BQ99453 314 aa10.97□□□□□ -0.65
VPS9D1-205ENST00000565452 ZBED2Q9BTP6 218 aa10.97□□□□□ -0.65
VPS9D1-205ENST00000565452 PRKAG3Q9UGI9 489 aa10.97□□□□□ -0.65
VPS9D1-205ENST00000565452 ZNF214Q9UL59 606 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms