RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PDIA4P13667 645 aaKnown RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 NFX1Q12986 1120 aaKnown RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 R3HDM1Q15032 1099 aaKnown RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 NR6A1Q15406 480 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 KLHL40Q2TBA0 621 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 SKOR2Q2VWA4 1001 aaPredicted RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 CCDC93Q567U6 631 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 OTUD7BQ6GQQ9 843 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 VASH1Q7L8A9 365 aaPredicted RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 CERS3Q8IU89 383 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 CHMP4CQ96CF2 233 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 ZFP42Q96MM3 310 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 AIFM3Q96NN9 605 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 UBAC1Q9BSL1 405 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 MTFR1LQ9H019 292 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 GZF1Q9H116 711 aaPredicted RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 DDX4Q9NQI0 724 aaKnown RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 ROBO3Q96MS0 1386 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 USP17L3A6NCW0 530 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 USP17L4A6NCW7 530 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 UBE2Q2LH0YL09 131 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 H3BQV1 296 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 PPIP5K2O43314 1243 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 DHX16O60231 1041 aaKnown RBP8.59□□□□□ -1.03
SPG11-204ENST00000557866 POLR3DP05423 398 aaPredicted RBP8.59□□□□□ -1.03
SPG11-204ENST00000557866 SLC3A2P08195 630 aaKnown RBP8.59□□□□□ -1.03
SPG11-204ENST00000557866 NR3C2P08235 984 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 DEKP35659 375 aaKnown RBP8.59□□□□□ -1.03
SPG11-204ENST00000557866 CRKP46108 304 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 TGFB2P61812 414 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 GUCY1B3Q02153 619 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 PDE4BQ07343 736 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 SART3Q15020 963 aaKnown RBP8.59□□□□□ -1.03
SPG11-204ENST00000557866 RTN1Q16799 776 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 RCSD1Q6JBY9 416 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 CDC42EP5Q6NZY7 148 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 HHIPL2Q6UWX4 724 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 USP17L1Q7RTZ2 530 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 NBPF11Q86T75 865 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 KIAA0825Q8IV33 1275 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 ZNF654Q8IZM8 581 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 TMTC2Q8N394 836 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 PNMA1Q8ND90 353 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 SUPT20HQ8NEM7 779 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 PHKBQ93100 1093 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 ZDHHC15Q96MV8 337 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 PSMD1Q99460 953 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 ARHGAP9Q9BRR9 750 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 MRIQ9BWK5 157 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 ZNF277Q9NRM2 450 aaPredicted RBP8.59□□□□□ -1.03
SPG11-204ENST00000557866 IL17RBQ9NRM6 502 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 GJB4Q9NTQ9 266 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 USP40Q9NVE5 1235 aa8.59□□□□□ -1.03
SPG11-204ENST00000557866 DDX49Q9Y6V7 483 aaKnown RBP8.59□□□□□ -1.03
SPG11-204ENST00000557866 CHD4Q14839 1912 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 MYH13Q9UKX3 1938 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 ERICH2A1L162 156 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 CPLX1O14810 134 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 IFNAR1P17181 557 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 RASA1P20936 1047 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 GUCY1A2P33402 732 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 CDK8P49336 464 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 RCAN1P53805 252 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 TFAP4Q01664 338 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 GABPAQ06546 454 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 TROAPQ12815 778 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 NFIAQ12857 509 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 IFIT1BQ5T764 474 aaKnown RBP8.58□□□□□ -1.04
SPG11-204ENST00000557866 SYNE3Q6ZMZ3 975 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 C16orf86Q6ZW13 317 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 ZBTB33Q86T24 672 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 ZFPM1Q8IX07 1006 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 RTKN2Q8IZC4 609 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 FANCBQ8NB91 859 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 FBXO18Q8NFZ0 1043 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 NUP133Q8WUM0 1156 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 ANKS1AQ92625 1134 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 TEKT1Q969V4 418 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 ITPKCQ96DU7 683 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 ATP6V1DQ9Y5K8 247 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 COL4A5P29400 1685 aa8.58□□□□□ -1.04
SPG11-204ENST00000557866 STK36Q9NRP7 1315 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 TSPY2A6NKD2 308 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 FIBPO43427 364 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 FSHRP23945 695 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 POLD1P28340 1107 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 RFC5P40937 340 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 HDLBPQ00341 1268 aaKnown RBP8.57□□□□□ -1.04
SPG11-204ENST00000557866 PTK2Q05397 1052 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 PICALMQ13492 652 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 TMEM259Q4ZIN3 620 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 TTC6Q86TZ1 520 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 IQCA1Q86XH1 822 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 CMTR1Q8N1G2 835 aaKnown RBP8.57□□□□□ -1.04
SPG11-204ENST00000557866 CRACR2BQ8N4Y2 399 aaPredicted RBP8.57□□□□□ -1.04
SPG11-204ENST00000557866 SHISA4Q96DD7 197 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 C8orf76Q96K31 380 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 GMLQ99445 158 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 ALG1Q9BT22 464 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms