RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FOXQ1Q9C009 403 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 BCL11AQ9H165 835 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-241ENST00000556374 CHD4Q14839 1912 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 MST1RQ04912 1400 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 RNF123Q5XPI4 1314 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 KIAA1210Q9ULL0 1709 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 KANK1Q14678 1352 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 TCERG1O14776 1098 aaKnown RBP5.7□□□□□ -1.5
ATXN3-241ENST00000556374 EOMESO95936 686 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 MAPK8P45983 427 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 WDR43Q15061 677 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATXN3-241ENST00000556374 PPM1JQ5JR12 505 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 THAP5Q7Z6K1 395 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-241ENST00000556374 LRRN4CLQ8ND94 238 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 ELMO3Q96BJ8 720 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 PRDM5Q9NQX1 630 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-241ENST00000556374 PICK1Q9NRD5 415 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 RCAN3Q9UKA8 241 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 PCDHA4Q9UN74 947 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 ZFYVE9O95405 1425 aa5.7□□□□□ -1.5
ATXN3-241ENST00000556374 PLEKHG1Q9ULL1 1385 aa5.69□□□□□ -1.5
ATXN3-241ENST00000556374 RLBP1P12271 317 aa5.69□□□□□ -1.5
ATXN3-241ENST00000556374 ATF3P18847 181 aa5.69□□□□□ -1.5
ATXN3-241ENST00000556374 NKPD1Q17RQ9 610 aa5.69□□□□□ -1.5
ATXN3-241ENST00000556374 PCNX4Q63HM2 1172 aa5.69□□□□□ -1.5
ATXN3-241ENST00000556374 GRIN3AQ8TCU5 1115 aa5.69□□□□□ -1.5
ATXN3-241ENST00000556374 WNT10AQ9GZT5 417 aa5.69□□□□□ -1.5
ATXN3-241ENST00000556374 ADAMTS6Q9UKP5 1117 aa5.69□□□□□ -1.5
ATXN3-241ENST00000556374 PITPNM2Q9BZ72 1349 aa5.69□□□□□ -1.5
ATXN3-241ENST00000556374 RREB1Q92766 1687 aa5.69□□□□□ -1.5
ATXN3-241ENST00000556374 ADGRB2O60241 1585 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 DBX1A6NMT0 343 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 DCDC2CA8MYV0 355 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 PAGE1O75459 146 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 CYP7A1P22680 504 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 GNA15P30679 374 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 KIR3DL1P43629 444 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 AFMP43652 599 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 ARMCX6Q7L4S7 300 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 C12orf40Q86WS4 652 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 NPAS4Q8IUM7 802 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 HID1Q8IV36 788 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 LRRC59Q96AG4 307 aaKnown RBP5.68□□□□□ -1.5
ATXN3-241ENST00000556374 FAM84AQ96KN4 292 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 IPO9Q96P70 1041 aaKnown RBP5.68□□□□□ -1.5
ATXN3-241ENST00000556374 U3KQE9 123 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 MYOM2P54296 1465 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 PLCH1Q4KWH8 1693 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 NUP188Q5SRE5 1749 aa5.68□□□□□ -1.5
ATXN3-241ENST00000556374 KIF1BO60333 1816 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 TMEM131LA2VDJ0 1609 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 CLTCL1P53675 1640 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 MYOM1P52179 1685 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 USP17L7P0C7H9 530 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 ZP2Q05996 745 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 PKN1Q16512 942 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 RGL3Q3MIN7 710 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 SFRP5Q5T4F7 317 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 ZSWIM9Q86XI8 627 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 SLC38A3Q99624 504 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 TRAIPQ9BWF2 469 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 C19orf44Q9H6X5 657 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 LMTK2Q8IWU2 1503 aa5.67□□□□□ -1.5
ATXN3-241ENST00000556374 ADAMTS13Q76LX8 1427 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 NWD2Q9ULI1 1742 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 PRPF40AO75400 957 aaKnown RBP5.66□□□□□ -1.5
ATXN3-241ENST00000556374 ITIH2P19823 946 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 EIF4BP23588 611 aaKnown RBP5.66□□□□□ -1.5
ATXN3-241ENST00000556374 SLBPQ14493 270 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATXN3-241ENST00000556374 CC2D1BQ5T0F9 858 aaKnown RBP5.66□□□□□ -1.5
ATXN3-241ENST00000556374 MPRIPQ6WCQ1 1025 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 CTNND2Q9UQB3 1225 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 KNSTRNQ9Y448 316 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 IVNS1ABPQ9Y6Y0 642 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 USP32Q8NFA0 1604 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 NRXN3Q9Y4C0 1643 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 PIK3R4Q99570 1358 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 NINLQ9Y2I6 1382 aa5.66□□□□□ -1.5
ATXN3-241ENST00000556374 PIK3C2GO75747 1445 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 NOS1P29475 1434 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 ADGRL3Q9HAR2 1447 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 SLITRK5O94991 958 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 CST3P01034 146 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-241ENST00000556374 LDHBP07195 334 aaKnown RBP5.65□□□□□ -1.5
ATXN3-241ENST00000556374 DEKP35659 375 aaKnown RBP5.65□□□□□ -1.5
ATXN3-241ENST00000556374 GDNFP39905 211 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 IKZF1Q13422 519 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 TTBK2Q6IQ55 1244 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 LRFN4Q6PJG9 635 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 NPM2Q86SE8 214 aaKnown RBP5.65□□□□□ -1.5
ATXN3-241ENST00000556374 KSR1Q8IVT5 923 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 MFSD4AQ8N468 514 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 PIWIL2Q8TC59 973 aaKnown RBP5.65□□□□□ -1.5
ATXN3-241ENST00000556374 GAL3ST3Q96A11 431 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 PPP1R16BQ96T49 567 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 SEMA3GQ9NS98 782 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms