RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 FAM170BA6NMN3 283 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 ERVV-2B6SEH9 535 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 NEFLP07196 543 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 RLBP1P12271 317 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 TEFQ10587 303 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 ERICH6BQ5W0A0 696 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 GTF3C2Q8WUA4 911 aaPredicted RBP8.05□□□□□ -1.12
LINC00643-203ENST00000555518 MISP3Q96FF7 219 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 NRSN2Q9GZP1 204 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 SLC5A6Q9Y289 635 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 ITGB4P16144 1822 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 C5P01031 1676 aa8.05□□□□□ -1.12
LINC00643-203ENST00000555518 SOS1Q07889 1333 aaPredicted RBP8.04□□□□□ -1.12
LINC00643-203ENST00000555518 DOT1LQ8TEK3 1739 aa8.04□□□□□ -1.12
LINC00643-203ENST00000555518 HOXB7P09629 217 aa8.04□□□□□ -1.12
LINC00643-203ENST00000555518 SLC39A6Q13433 755 aa8.04□□□□□ -1.12
LINC00643-203ENST00000555518 PEAR1Q5VY43 1037 aaPredicted RBP8.04□□□□□ -1.12
LINC00643-203ENST00000555518 MARCH10Q8NA82 808 aaPredicted RBP8.04□□□□□ -1.12
LINC00643-203ENST00000555518 EXOC6Q8TAG9 804 aa8.04□□□□□ -1.12
LINC00643-203ENST00000555518 RAD18Q9NS91 495 aa8.04□□□□□ -1.12
LINC00643-203ENST00000555518 SMC4Q9NTJ3 1288 aa8.04□□□□□ -1.12
LINC00643-203ENST00000555518 ZC3H7BQ9UGR2 993 aaKnown RBP8.04□□□□□ -1.12
LINC00643-203ENST00000555518 ACTL7BQ9Y614 415 aa8.04□□□□□ -1.12
LINC00643-203ENST00000555518 KIF16BQ96L93 1317 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 SYNGAP1Q96PV0 1343 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 BCL9O00512 1426 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 PRAMEF22A3QJZ6 481 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 EXOC5O00471 708 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 NFICP08651 508 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 TRIM27P14373 513 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 PCDH1Q08174 1060 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 SF3B2Q13435 895 aaKnown RBP8.03□□□□□ -1.12
LINC00643-203ENST00000555518 PDE3AQ14432 1141 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 POU4F3Q15319 338 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 ZNF790Q6PG37 636 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 SHISA5Q8N114 240 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 CRBNQ96SW2 442 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 SEMA6CQ9H3T2 930 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 ACSS3Q9H6R3 686 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 LRRC4CQ9HCJ2 640 aa8.03□□□□□ -1.12
LINC00643-203ENST00000555518 A0A096LPE4 126 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 A0A1W2PPZ6 126 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 TCERG1O14776 1098 aaKnown RBP8.02□□□□□ -1.13
LINC00643-203ENST00000555518 RAB6AP20340 208 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 MAOBP27338 520 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 DDB1Q16531 1140 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 CYP27C1Q4G0S4 372 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 MEX3CQ5U5Q3 659 aaKnown RBP8.02□□□□□ -1.13
LINC00643-203ENST00000555518 ZKSCAN2Q63HK3 967 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 ZNF765Q7L2R6 523 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 DYMQ7RTS9 669 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.02□□□□□ -1.13
LINC00643-203ENST00000555518 PANK1Q8TE04 598 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 FBXO41Q8TF61 875 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 PIGBQ92521 554 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 ARHGAP45Q92619 1136 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 ZNF496Q96IT1 587 aaPredicted RBP8.02□□□□□ -1.13
LINC00643-203ENST00000555518 CORO1BQ9BR76 489 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 ZFYVE28Q9HCC9 887 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 NOB1Q9ULX3 412 aaKnown RBP8.02□□□□□ -1.13
LINC00643-203ENST00000555518 CACNA1FO60840 1977 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 LAMB4A4D0S4 1761 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 ABCC4O15439 1325 aa8.02□□□□□ -1.13
LINC00643-203ENST00000555518 COL19A1Q14993 1142 aa8.01□□□□□ -1.13
LINC00643-203ENST00000555518 OGFOD3Q6PK18 319 aa8.01□□□□□ -1.13
LINC00643-203ENST00000555518 ATF7IPQ6VMQ6 1270 aa8.01□□□□□ -1.13
LINC00643-203ENST00000555518 G2E3Q7L622 706 aa8.01□□□□□ -1.13
LINC00643-203ENST00000555518 CCNJLQ8IV13 435 aa8.01□□□□□ -1.13
LINC00643-203ENST00000555518 FRAT1Q92837 279 aaPredicted RBP8.01□□□□□ -1.13
LINC00643-203ENST00000555518 GSX1Q9H4S2 264 aaPredicted RBP8.01□□□□□ -1.13
LINC00643-203ENST00000555518 FOXD3Q9UJU5 478 aaPredicted RBP8.01□□□□□ -1.13
LINC00643-203ENST00000555518 TRPC5Q9UL62 973 aaPredicted RBP8.01□□□□□ -1.13
LINC00643-203ENST00000555518 CCDC9Q9Y3X0 531 aaKnown RBP8.01□□□□□ -1.13
LINC00643-203ENST00000555518 CICQ96RK0 1608 aaPredicted RBP8□□□□□ -1.13
LINC00643-203ENST00000555518 ASPAP45381 313 aa8□□□□□ -1.13
LINC00643-203ENST00000555518 PLCL1Q15111 1095 aa8□□□□□ -1.13
LINC00643-203ENST00000555518 LRP10Q7Z4F1 713 aa8□□□□□ -1.13
LINC00643-203ENST00000555518 BCL7CQ8WUZ0 217 aaPredicted RBP8□□□□□ -1.13
LINC00643-203ENST00000555518 PPP4R2Q9NY27 417 aa8□□□□□ -1.13
LINC00643-203ENST00000555518 N4BP2Q86UW6 1770 aaPredicted RBP7.99□□□□□ -1.13
LINC00643-203ENST00000555518 TJP1Q07157 1748 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 MVPQ14764 893 aaKnown RBP7.99□□□□□ -1.13
LINC00643-203ENST00000555518 PROSER3Q2NL68 480 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 CCDC30Q5VVM6 783 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 GJD3Q8N144 294 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 RETREG2Q8NC44 543 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 LATS2Q9NRM7 1088 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 FAM105AQ9NUU6 356 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 TMOD3Q9NYL9 352 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 ASAP1Q9ULH1 1129 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 AP4E1Q9UPM8 1137 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 USP16Q9Y5T5 823 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 PTPRCP08575 1304 aa7.99□□□□□ -1.13
LINC00643-203ENST00000555518 NHSQ6T4R5 1651 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 IPO8O15397 1037 aaKnown RBP7.98□□□□□ -1.13
LINC00643-203ENST00000555518 PAPLNO95428 1278 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 ANXA1P04083 346 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 CANXP27824 592 aaKnown RBP7.98□□□□□ -1.13
LINC00643-203ENST00000555518 SSFA2P28290 1259 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 ZNF423Q2M1K9 1284 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms