RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ADGRA1Q86SQ6 560 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 RPAINQ86UA6 219 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 EHBP1Q8NDI1 1231 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 COG1Q8WTW3 980 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 SDR42E1Q8WUS8 393 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 FAM84BQ96KN1 310 aaPredicted RBP12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 MED15Q96RN5 788 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 RHOXF2Q9BQY4 288 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 HAUS4Q9H6D7 363 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 TRIM75PA6NK02 468 aa12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 FOXN1O15353 648 aa12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 ORC4O43929 436 aa12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 RC3H1Q5TC82 1133 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 MCTP2Q6DN12 878 aa12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 CCDC91Q7Z6B0 441 aa12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 ENAHQ8N8S7 591 aaPredicted RBP12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 AATFQ9NY61 560 aaKnown RBP eCLIP12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 LIMA1Q9UHB6 759 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 HPCAL4Q9UM19 191 aa12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 SCN7AQ01118 1682 aa12.02□□□□□ -0.49
MTHFD1-210ENST00000555252 TEX33O43247 280 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 GYPCP04921 128 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 ARHGAP25P42331 645 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 CACNA1SQ13698 1873 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 IQCEQ6IPM2 695 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 FOXR1Q6PIV2 292 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 SH3RF1Q7Z6J0 888 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 POTEDQ86YR6 584 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 TRMT44Q8IYL2 757 aaKnown RBP12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 ANKRD20A12PQ8NF67 263 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 FERMT2Q96AC1 680 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 PYM1Q9BRP8 204 aaKnown RBP12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 PHF20Q9BVI0 1012 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 CRNKL1Q9BZJ0 848 aaKnown RBP12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 ATP8A2Q9NTI2 1148 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 ABHD10Q9NUJ1 306 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 COL1A1P02452 1464 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 UBE2Q2LH0YL09 131 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 CASP14P31944 242 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 FUT2Q10981 343 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 PTPN21Q16825 1174 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 TACO1Q9BSH4 297 aaKnown RBP12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 SUGCTQ9HAC7 445 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 CABP5Q9NP86 173 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 TAOK2Q9UL54 1235 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 PCDHB6Q9Y5E3 794 aa12.01□□□□□ -0.49
MTHFD1-210ENST00000555252 ZC3H4Q9UPT8 1303 aaKnown RBP12□□□□□ -0.49
MTHFD1-210ENST00000555252 DLEC1Q9Y238 1755 aa12□□□□□ -0.49
MTHFD1-210ENST00000555252 RPS8P62241 208 aaKnown RBP12□□□□□ -0.49
MTHFD1-210ENST00000555252 NR5A1Q13285 461 aa12□□□□□ -0.49
MTHFD1-210ENST00000555252 STIM1Q13586 685 aa12□□□□□ -0.49
MTHFD1-210ENST00000555252 SBK1Q52WX2 424 aa12□□□□□ -0.49
MTHFD1-210ENST00000555252 PAPD7Q5XG87 772 aaKnown RBP12□□□□□ -0.49
MTHFD1-210ENST00000555252 SPATS2Q86XZ4 545 aaKnown RBP12□□□□□ -0.49
MTHFD1-210ENST00000555252 FAM76AQ8TAV0 307 aa12□□□□□ -0.49
MTHFD1-210ENST00000555252 NSUN4Q96CB9 384 aaKnown RBP12□□□□□ -0.49
MTHFD1-210ENST00000555252 ARPP21Q9UBL0 812 aaPredicted RBP12□□□□□ -0.49
MTHFD1-210ENST00000555252 NARFQ9UHQ1 456 aa12□□□□□ -0.49
MTHFD1-210ENST00000555252 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12□□□□□ -0.49
MTHFD1-210ENST00000555252 ANO9A1A5B4 782 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 EBAG9O00559 213 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 CLSTN1O94985 981 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 HIBADHP31937 336 aaKnown RBP11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 TROAPQ12815 778 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 PPFIA1Q13136 1202 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 PKN1Q16512 942 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 HSP90AA4PQ58FG1 418 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 CCDC82Q8N4S0 544 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 NOA1Q8NC60 698 aaKnown RBP11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 CRACR2AQ9BSW2 395 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 ERLIN2O94905 339 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 TRAPPC10P48553 1259 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 ERVK-24P63145 666 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 ITIH3Q06033 890 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 CCDC70Q6NSX1 233 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 TEX2Q8IWB9 1127 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 OXER1Q8TDS5 423 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 CELF1Q92879 486 aaKnown RBP11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 SETDB2Q96T68 719 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 CSRNP2Q9H175 543 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 SAR1BQ9Y6B6 198 aa11.99□□□□□ -0.49
MTHFD1-210ENST00000555252 COL4A1P02462 1669 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 RPS6KA4O75676 772 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 CHRM1P11229 460 aaPredicted RBP11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 FXR1P51114 621 aaKnown RBP eCLIP11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 GSCP56915 257 aaPredicted RBP11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 CCDC178Q5BJE1 867 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 WWC2Q6AWC2 1192 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 CMTR1Q8N1G2 835 aaKnown RBP11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 ACRBPQ8NEB7 543 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 VPS54Q9P1Q0 977 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 V9GY48 417 aaPredicted RBP11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 MAST2Q6P0Q8 1798 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms