RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 DCXO43602 365 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 SSTR3P32745 418 aaPredicted RBP12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 LEXMQ3ZCV2 418 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 SLC43A3Q8NBI5 491 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 ATG4CQ96DT6 458 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 XAGE2Q96GT9 111 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 AGBL1Q96MI9 1066 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 NOC4LQ9BVI4 516 aaKnown RBP12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 MTIF3Q9H2K0 278 aaKnown RBP12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 HIPK3Q9H422 1215 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 SLC5A4Q9NY91 659 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 RAI14Q9P0K7 980 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 DNAH14Q0VDD8 3507 aa12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 ZBBXA8MT70 800 aa12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 FCER1AP12319 257 aa12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 DSG3P32926 999 aa12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 PPP4CP60510 307 aa12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 GSTO1P78417 241 aa12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 TCF15Q12870 199 aa12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 DDX10Q13206 875 aaKnown RBP12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 PLS1Q14651 629 aa12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 TMEM132BQ14DG7 1078 aa12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 HOXC10Q9NYD6 342 aa12.61□□□□□ -0.39
SLC48A1-209ENST00000552003 A0A1B0GUL7 405 aa12.6□□□□□ -0.39
SLC48A1-209ENST00000552003 GRXCR2A6NFK2 248 aa12.6□□□□□ -0.39
SLC48A1-209ENST00000552003 PTGS1P23219 599 aa12.6□□□□□ -0.39
SLC48A1-209ENST00000552003 EVX2Q03828 476 aa12.6□□□□□ -0.39
SLC48A1-209ENST00000552003 SPATA5Q8NB90 893 aa12.6□□□□□ -0.39
SLC48A1-209ENST00000552003 GDPD5Q8WTR4 605 aa12.6□□□□□ -0.39
SLC48A1-209ENST00000552003 VTI1AQ96AJ9 217 aa12.6□□□□□ -0.39
SLC48A1-209ENST00000552003 TRPV6Q9H1D0 765 aa12.6□□□□□ -0.39
SLC48A1-209ENST00000552003 UPF3AQ9H1J1 476 aaKnown RBP12.6□□□□□ -0.39
SLC48A1-209ENST00000552003 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
SLC48A1-209ENST00000552003 VPS13AQ96RL7 3174 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 KMT2BQ9UMN6 2715 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 LCHNA4D1U4 455 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 DUSP11O75319 330 aaKnown RBP12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 C6orf222P0C671 652 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 KCNA5P22460 613 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 SHMT1P34896 483 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 MCAMP43121 646 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 GJA9P57773 515 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 DYNLL1P63167 89 aaKnown RBP12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 SEPT2Q15019 361 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 PTCRAQ6ISU1 281 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 MMP19Q99542 508 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 TRIM34Q9BYJ4 488 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 FAM86C1Q9NVL1 165 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 FAM184BQ9ULE4 1060 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 DIS3Q9Y2L1 958 aaKnown RBP12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 MYO7AQ13402 2215 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 GVINP1Q7Z2Y8 2422 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 PLXNA3P51805 1871 aa12.59□□□□□ -0.39
SLC48A1-209ENST00000552003 TLR3O15455 904 aaKnown RBP12.58□□□□□ -0.4
SLC48A1-209ENST00000552003 B4GALT4O60513 344 aa12.58□□□□□ -0.4
SLC48A1-209ENST00000552003 BEX3Q00994 111 aa12.58□□□□□ -0.4
SLC48A1-209ENST00000552003 ABCB5Q2M3G0 1257 aa12.58□□□□□ -0.4
SLC48A1-209ENST00000552003 SIAH1Q8IUQ4 282 aa12.58□□□□□ -0.4
SLC48A1-209ENST00000552003 TANGO6Q9C0B7 1094 aa12.58□□□□□ -0.4
SLC48A1-209ENST00000552003 ASTN1O14525 1302 aa12.58□□□□□ -0.4
SLC48A1-209ENST00000552003 TPRP12270 2363 aaKnown RBP12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 GFRA3O60609 400 aa12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 TFCP2Q12800 502 aa12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 CERKLQ49MI3 558 aaPredicted RBP12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 GNASQ5JWF2 1037 aa12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 CXCL17Q6UXB2 119 aa12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 TMCO2Q7Z6W1 182 aaPredicted RBP12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 MB21D1Q8N884 522 aa12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 PCSK9Q8NBP7 692 aaKnown RBP12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 FGD4Q96M96 766 aa12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 ZHX1Q9UKY1 873 aaPredicted RBP12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 ADAMTS5Q9UNA0 930 aa12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 CNPY2Q9Y2B0 182 aa12.57□□□□□ -0.4
SLC48A1-209ENST00000552003 WDR87Q6ZQQ6 2873 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 NCOR2Q9Y618 2525 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 KRT37O76014 449 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 RGS20O76081 388 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 NKX3-2P78367 333 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 ZP2Q05996 745 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 MKRN4PQ13434 485 aaPredicted RBP12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 DEFB128Q7Z7B8 93 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 HERC6Q8IVU3 1022 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 RPUSD2Q8IZ73 545 aaKnown RBP12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 KATNBL1Q9H079 304 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 SUGCTQ9HAC7 445 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 COPRSQ9NQ92 184 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 KMT2EQ8IZD2 1858 aa12.56□□□□□ -0.4
SLC48A1-209ENST00000552003 H3BQ06 376 aaPredicted RBP12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 FLOT1O75955 427 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 HLA-DOAP06340 250 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 PLCD1P51178 756 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 ACVR2BQ13705 512 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 CCDC144BQ3MJ40 725 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms