RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 ATN1P54259 1190 aaPredicted RBP27.42■■□□□ 1.98
TROAP-216ENST00000551567 ZNF792Q3KQV3 632 aa27.42■■□□□ 1.98
TROAP-216ENST00000551567 CHMP4CQ96CF2 233 aa27.42■■□□□ 1.98
TROAP-216ENST00000551567 INCENPQ9NQS7 918 aa27.42■■□□□ 1.98
TROAP-216ENST00000551567 SYNPO2Q9UMS6 1093 aa27.42■■□□□ 1.98
TROAP-216ENST00000551567 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.42■■□□□ 1.98
TROAP-216ENST00000551567 RIPK3Q9Y572 518 aa27.42■■□□□ 1.98
TROAP-216ENST00000551567 SMCHD1A6NHR9 2005 aa27.41■■□□□ 1.98
TROAP-216ENST00000551567 A0A0D9SFI3 127 aa27.41■■□□□ 1.98
TROAP-216ENST00000551567 ZBED4O75132 1171 aa27.41■■□□□ 1.98
TROAP-216ENST00000551567 SLFN13Q68D06 897 aa27.41■■□□□ 1.98
TROAP-216ENST00000551567 B4GALNT3Q6L9W6 998 aa27.41■■□□□ 1.98
TROAP-216ENST00000551567 FAM227BQ96M60 508 aa27.41■■□□□ 1.98
TROAP-216ENST00000551567 TINF2Q9BSI4 451 aa27.41■■□□□ 1.98
TROAP-216ENST00000551567 HELLSQ9NRZ9 838 aa27.41■■□□□ 1.98
TROAP-216ENST00000551567 FEM1BQ9UK73 627 aa27.41■■□□□ 1.98
TROAP-216ENST00000551567 BMP3P12645 472 aa27.4■■□□□ 1.98
TROAP-216ENST00000551567 AAMPQ13685 434 aa27.4■■□□□ 1.98
TROAP-216ENST00000551567 ARRDC4Q8NCT1 418 aa27.4■■□□□ 1.98
TROAP-216ENST00000551567 RAVER2Q9HCJ3 691 aaKnown RBP27.4■■□□□ 1.98
TROAP-216ENST00000551567 TSPY2A6NKD2 308 aa27.39■■□□□ 1.98
TROAP-216ENST00000551567 KBTBD13C9JR72 458 aa27.39■■□□□ 1.98
TROAP-216ENST00000551567 RWDD1Q9H446 243 aaPredicted RBP27.39■■□□□ 1.98
TROAP-216ENST00000551567 SLC38A10Q9HBR0 1119 aa27.39■■□□□ 1.98
TROAP-216ENST00000551567 STX8Q9UNK0 236 aa27.39■■□□□ 1.98
TROAP-216ENST00000551567 DIS3Q9Y2L1 958 aaKnown RBP27.39■■□□□ 1.98
TROAP-216ENST00000551567 TACC3Q9Y6A5 838 aa27.39■■□□□ 1.98
TROAP-216ENST00000551567 TRIM6-TRIM34B2RNG4 842 aa27.38■■□□□ 1.97
TROAP-216ENST00000551567 ATP2A1O14983 1001 aa27.38■■□□□ 1.97
TROAP-216ENST00000551567 NMT2O60551 498 aa27.38■■□□□ 1.97
TROAP-216ENST00000551567 TAL1P17542 331 aaPredicted RBP27.38■■□□□ 1.97
TROAP-216ENST00000551567 BMP8BP34820 402 aa27.38■■□□□ 1.97
TROAP-216ENST00000551567 SMC5Q8IY18 1101 aa27.38■■□□□ 1.97
TROAP-216ENST00000551567 DDX11Q96FC9 970 aa27.38■■□□□ 1.97
TROAP-216ENST00000551567 LAMA3Q16787 3333 aa27.38■■□□□ 1.97
TROAP-216ENST00000551567 TMEM232C9JQI7 657 aa27.37■■□□□ 1.97
TROAP-216ENST00000551567 SOX1O00570 391 aaPredicted RBP27.37■■□□□ 1.97
TROAP-216ENST00000551567 RANBP6O60518 1105 aaKnown RBP27.37■■□□□ 1.97
TROAP-216ENST00000551567 NMIQ13287 307 aaPredicted RBP27.37■■□□□ 1.97
TROAP-216ENST00000551567 EXOC6Q8TAG9 804 aa27.37■■□□□ 1.97
TROAP-216ENST00000551567 NRBP1Q9UHY1 535 aa27.37■■□□□ 1.97
TROAP-216ENST00000551567 ANAPC4Q9UJX5 808 aa27.37■■□□□ 1.97
TROAP-216ENST00000551567 IKQ13123 557 aaPredicted RBP27.36■■□□□ 1.97
TROAP-216ENST00000551567 MCMDC2Q4G0Z9 681 aa27.36■■□□□ 1.97
TROAP-216ENST00000551567 RILPL2Q969X0 211 aa27.36■■□□□ 1.97
TROAP-216ENST00000551567 IL17RBQ9NRM6 502 aa27.36■■□□□ 1.97
TROAP-216ENST00000551567 IGHDP01880 384 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 MCCP23508 829 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 SLC1A4P43007 532 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 STAT2P52630 851 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 RTP1P59025 263 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 LRRC41Q15345 812 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 ALX1Q15699 326 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 PPP4R3BQ5MIZ7 849 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 RASGRP2Q7LDG7 609 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 ZNF589Q86UQ0 364 aaPredicted RBP27.35■■□□□ 1.97
TROAP-216ENST00000551567 GMCL1Q96IK5 515 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 UBE2OQ9C0C9 1292 aaKnown RBP27.35■■□□□ 1.97
TROAP-216ENST00000551567 TOMM22Q9NS69 142 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 MCM3APO60318 1980 aa27.35■■□□□ 1.97
TROAP-216ENST00000551567 RARBP10826 455 aa27.34■■□□□ 1.97
TROAP-216ENST00000551567 MDM2Q00987 491 aaPredicted RBP27.34■■□□□ 1.97
TROAP-216ENST00000551567 LENG1Q96BZ8 264 aaPredicted RBP27.34■■□□□ 1.97
TROAP-216ENST00000551567 LRCH3Q96II8 777 aa27.34■■□□□ 1.97
TROAP-216ENST00000551567 XPNPEP3Q9NQH7 507 aa27.34■■□□□ 1.97
TROAP-216ENST00000551567 HOMER2Q9NSB8 354 aa27.34■■□□□ 1.97
TROAP-216ENST00000551567 MTMR7Q9Y216 660 aa27.34■■□□□ 1.97
TROAP-216ENST00000551567 CNPY2Q9Y2B0 182 aa27.34■■□□□ 1.97
TROAP-216ENST00000551567 ATP11BQ9Y2G3 1177 aa27.34■■□□□ 1.97
TROAP-216ENST00000551567 DNAJC25-GNG10A0A024R161 153 aa27.33■■□□□ 1.97
TROAP-216ENST00000551567 FGAP02671 866 aa27.33■■□□□ 1.97
TROAP-216ENST00000551567 ZNF865P0CJ78 1059 aaPredicted RBP27.33■■□□□ 1.97
TROAP-216ENST00000551567 ADCYAP1R1P41586 468 aa27.33■■□□□ 1.97
TROAP-216ENST00000551567 OAZ1P54368 228 aa27.33■■□□□ 1.97
TROAP-216ENST00000551567 KCTD1Q719H9 257 aa27.33■■□□□ 1.97
TROAP-216ENST00000551567 CHD1LQ86WJ1 897 aa27.33■■□□□ 1.97
TROAP-216ENST00000551567 ANKRD35Q8N283 1001 aa27.33■■□□□ 1.97
TROAP-216ENST00000551567 FERMT2Q96AC1 680 aa27.33■■□□□ 1.97
TROAP-216ENST00000551567 LTBP2Q14767 1821 aa27.32■■□□□ 1.96
TROAP-216ENST00000551567 ORC4O43929 436 aa27.32■■□□□ 1.96
TROAP-216ENST00000551567 HSPD1P10809 573 aaKnown RBP27.32■■□□□ 1.96
TROAP-216ENST00000551567 RRP12Q5JTH9 1297 aaKnown RBP27.32■■□□□ 1.96
TROAP-216ENST00000551567 FAM160B2Q86V87 743 aa27.32■■□□□ 1.96
TROAP-216ENST00000551567 CHURC1Q8WUH1 139 aa27.32■■□□□ 1.96
TROAP-216ENST00000551567 FBXO40Q9UH90 709 aa27.32■■□□□ 1.96
TROAP-216ENST00000551567 CCDC171Q6TFL3 1326 aa27.32■■□□□ 1.96
TROAP-216ENST00000551567 PGK1P00558 417 aa27.31■■□□□ 1.96
TROAP-216ENST00000551567 AKR1A1P14550 325 aa27.31■■□□□ 1.96
TROAP-216ENST00000551567 NUCB1Q02818 461 aa27.31■■□□□ 1.96
TROAP-216ENST00000551567 SLC39A5Q6ZMH5 540 aa27.31■■□□□ 1.96
TROAP-216ENST00000551567 TICAM2Q86XR7 235 aa27.31■■□□□ 1.96
TROAP-216ENST00000551567 PLEKHM2Q8IWE5 1019 aa27.31■■□□□ 1.96
TROAP-216ENST00000551567 TDHQ8IZJ6 230 aa27.31■■□□□ 1.96
TROAP-216ENST00000551567 CHST13Q8NET6 341 aa27.31■■□□□ 1.96
TROAP-216ENST00000551567 STAG1Q8WVM7 1258 aa27.31■■□□□ 1.96
TROAP-216ENST00000551567 SYNGAP1Q96PV0 1343 aa27.31■■□□□ 1.96
TROAP-216ENST00000551567 FDX1P10109 184 aa27.3■■□□□ 1.96
TROAP-216ENST00000551567 HAND2P61296 217 aa27.3■■□□□ 1.96
TROAP-216ENST00000551567 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.3■■□□□ 1.96
TROAP-216ENST00000551567 MSL3Q8N5Y2 521 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms