RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 CDC42BPGQ6DT37 1551 aa4.94□□□□□ -1.62
APAF1-208ENST00000549007 TMF1P82094 1093 aa4.94□□□□□ -1.62
APAF1-208ENST00000549007 PABPC4Q13310 644 aaKnown RBP eCLIP4.94□□□□□ -1.62
APAF1-208ENST00000549007 GRIK5Q16478 980 aa4.94□□□□□ -1.62
APAF1-208ENST00000549007 DDX42Q86XP3 938 aaKnown RBP eCLIP4.94□□□□□ -1.62
APAF1-208ENST00000549007 SLC6A18Q96N87 628 aa4.94□□□□□ -1.62
APAF1-208ENST00000549007 METTL14Q9HCE5 456 aaKnown RBP4.94□□□□□ -1.62
APAF1-208ENST00000549007 PICK1Q9NRD5 415 aa4.94□□□□□ -1.62
APAF1-208ENST00000549007 HIF3AQ9Y2N7 669 aa4.94□□□□□ -1.62
APAF1-208ENST00000549007 STARD13Q9Y3M8 1113 aa4.94□□□□□ -1.62
APAF1-208ENST00000549007 ATP7BP35670 1465 aa4.94□□□□□ -1.62
APAF1-208ENST00000549007 USP32Q8NFA0 1604 aa4.94□□□□□ -1.62
APAF1-208ENST00000549007 RGPD8O14715 1765 aaPredicted RBP4.94□□□□□ -1.62
APAF1-208ENST00000549007 KIF7Q2M1P5 1343 aa4.94□□□□□ -1.62
APAF1-208ENST00000549007 MEIS3P2A8K0S8 358 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 FSCN2O14926 492 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 ADH6P28332 368 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 C19orf57Q0VDD7 668 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 LRRC41Q15345 812 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 C1orf229Q6ZS94 237 aaPredicted RBP4.93□□□□□ -1.62
APAF1-208ENST00000549007 WDR75Q8IWA0 830 aaKnown RBP4.93□□□□□ -1.62
APAF1-208ENST00000549007 TMEM192Q8IY95 271 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 KCNK4Q9NYG8 393 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 FAN1Q9Y2M0 1017 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 AFF1P51825 1210 aaKnown RBP4.93□□□□□ -1.62
APAF1-208ENST00000549007 NUTM2GQ5VZR2 741 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 LHFPL2Q6ZUX7 228 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 HDXQ7Z353 690 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 STRA8Q7Z7C7 330 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 GPR161Q8N6U8 529 aaKnown RBP4.93□□□□□ -1.62
APAF1-208ENST00000549007 NGDNQ8NEJ9 315 aaKnown RBP4.93□□□□□ -1.62
APAF1-208ENST00000549007 ST13P5Q8NFI4 369 aaPredicted RBP4.93□□□□□ -1.62
APAF1-208ENST00000549007 KIF2CQ99661 725 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 TARS2Q9BW92 718 aaKnown RBP4.93□□□□□ -1.62
APAF1-208ENST00000549007 EFCC1Q9HA90 598 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 ARHGEF4Q9NR80 690 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 PPIP5K1Q6PFW1 1433 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 FMN2Q9NZ56 1722 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 WASHC2AQ641Q2 1341 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 A0A087X0B3 334 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 BLACEA4D250 179 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 ADGRB2O60241 1585 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 KATNA1O75449 491 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 SDSP20132 328 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 HSPA1LP34931 641 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 AP3B2Q13367 1082 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 ZBTB38Q8NAP3 1195 aaPredicted RBP4.93□□□□□ -1.62
APAF1-208ENST00000549007 FAM13CQ8NE31 585 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 HOMER2Q9NSB8 354 aa4.93□□□□□ -1.62
APAF1-208ENST00000549007 NCOA3Q9Y6Q9 1424 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 BRDTQ58F21 947 aaPredicted RBP4.92□□□□□ -1.62
APAF1-208ENST00000549007 AKAP4Q5JQC9 854 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 RNFT1Q5M7Z0 435 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 CRIPAKQ8N1N5 446 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 JMYQ8N9B5 988 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 C19orf47Q8N9M1 422 aaKnown RBP4.92□□□□□ -1.62
APAF1-208ENST00000549007 CDC6Q99741 560 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 ROBO1Q9Y6N7 1651 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 ACEP12821 1306 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 DCCP43146 1447 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 LOC100289279A0A1B0GTE1 492 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 M0R082 166 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 DGAT1O75907 488 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 CYP11A1P05108 521 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 NFKB2Q00653 900 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 ZNF460Q14592 562 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 SF1Q15637 639 aaKnown RBP4.92□□□□□ -1.62
APAF1-208ENST00000549007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.92□□□□□ -1.627e-6■■■■□ 19.6
APAF1-208ENST00000549007 ZSWIM2Q8NEG5 633 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 ZNF417Q8TAU3 575 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 TRIM47Q96LD4 638 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 ZNF587Q96SQ5 575 aaPredicted RBP4.92□□□□□ -1.62
APAF1-208ENST00000549007 WDR18Q9BV38 432 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 LRP2BPQ9P2M1 347 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 A0A1W2PQU0 124 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 CCNFP41002 786 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 PPP2R2AP63151 447 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 SLC7A5Q01650 507 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 STRN3Q13033 797 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 TM4SF20Q53R12 229 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 FOXR1Q6PIV2 292 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 UBASH3BQ8TF42 649 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 MFSD3Q96ES6 412 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 CNNM2Q9H8M5 875 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 CACNA2D2Q9NY47 1150 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 TJP2Q9UDY2 1190 aa4.92□□□□□ -1.62
APAF1-208ENST00000549007 DRD2P14416 443 aa4.91□□□□□ -1.62
APAF1-208ENST00000549007 STAT3P40763 770 aa4.91□□□□□ -1.62
APAF1-208ENST00000549007 PCSK7Q16549 785 aa4.91□□□□□ -1.62
APAF1-208ENST00000549007 TMEM67Q5HYA8 995 aa4.91□□□□□ -1.62
APAF1-208ENST00000549007 BAHD1Q8TBE0 780 aaPredicted RBP4.91□□□□□ -1.62
APAF1-208ENST00000549007 BRINP2Q9C0B6 783 aa4.91□□□□□ -1.62
APAF1-208ENST00000549007 CCDC8Q9H0W5 538 aaPredicted RBP4.91□□□□□ -1.62
APAF1-208ENST00000549007 NCOA5Q9HCD5 579 aaKnown RBP4.91□□□□□ -1.62
APAF1-208ENST00000549007 PPP1R9AQ9ULJ8 1098 aa4.91□□□□□ -1.62
APAF1-208ENST00000549007 CCDC7Q96M83 1385 aa4.91□□□□□ -1.62
APAF1-208ENST00000549007 CBFA2T2O43439 604 aa4.91□□□□□ -1.62
APAF1-208ENST00000549007 VIL1P09327 827 aaKnown RBP4.91□□□□□ -1.62
APAF1-208ENST00000549007 SKOR2Q2VWA4 1001 aaPredicted RBP4.91□□□□□ -1.62
APAF1-208ENST00000549007 FOXD4L6Q3SYB3 417 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms