RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 CDK5RAP2Q96SN8 1893 aa10.26□□□□□ -0.77
TROAP-208ENST00000548817 MYO5AQ9Y4I1 1855 aaKnown RBP10.26□□□□□ -0.77
TROAP-208ENST00000548817 A0A0U1RQG5 324 aaPredicted RBP10.26□□□□□ -0.77
TROAP-208ENST00000548817 ARVCFO00192 962 aa10.26□□□□□ -0.77
TROAP-208ENST00000548817 ZNF865P0CJ78 1059 aaPredicted RBP10.26□□□□□ -0.77
TROAP-208ENST00000548817 TTF1Q15361 905 aaPredicted RBP10.26□□□□□ -0.77
TROAP-208ENST00000548817 SHROOM1Q2M3G4 852 aaPredicted RBP10.26□□□□□ -0.77
TROAP-208ENST00000548817 HSP90AB4PQ58FF6 505 aa10.26□□□□□ -0.77
TROAP-208ENST00000548817 CCSAPQ6IQ19 270 aaPredicted RBP10.26□□□□□ -0.77
TROAP-208ENST00000548817 FAM126BQ8IXS8 530 aa10.26□□□□□ -0.77
TROAP-208ENST00000548817 RPUSD2Q8IZ73 545 aaKnown RBP10.26□□□□□ -0.77
TROAP-208ENST00000548817 GJD3Q8N144 294 aa10.26□□□□□ -0.77
TROAP-208ENST00000548817 MSL3Q8N5Y2 521 aaKnown RBP10.26□□□□□ -0.77
TROAP-208ENST00000548817 UIMC1Q96RL1 719 aa10.26□□□□□ -0.77
TROAP-208ENST00000548817 PPP1R12CQ9BZL4 782 aa10.26□□□□□ -0.77
TROAP-208ENST00000548817 RPAP3Q9H6T3 665 aaPredicted RBP10.26□□□□□ -0.77
TROAP-208ENST00000548817 CD320Q9NPF0 282 aa10.26□□□□□ -0.77
TROAP-208ENST00000548817 DBNLQ9UJU6 430 aaKnown RBP10.26□□□□□ -0.77
TROAP-208ENST00000548817 CNPY2Q9Y2B0 182 aa10.26□□□□□ -0.77
TROAP-208ENST00000548817 SPTBN4Q9H254 2564 aa10.26□□□□□ -0.77
TROAP-208ENST00000548817 ZNFX1Q9P2E3 1918 aaKnown RBP10.25□□□□□ -0.77
TROAP-208ENST00000548817 MPHOSPH10O00566 681 aaKnown RBP10.25□□□□□ -0.77
TROAP-208ENST00000548817 SLC25A27O95847 323 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 PFKMP08237 780 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 KCNA10Q16322 511 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 TMEM67Q5HYA8 995 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 TATDN1Q6P1N9 297 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 AACSQ86V21 672 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 FAM178BQ8IXR5 827 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 EAF2Q96CJ1 260 aaPredicted RBP10.25□□□□□ -0.77
TROAP-208ENST00000548817 SEZ6LQ9BYH1 1024 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 CRNKL1Q9BZJ0 848 aaKnown RBP10.25□□□□□ -0.77
TROAP-208ENST00000548817 EHD4Q9H223 541 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 LMCD1Q9NZU5 365 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 CFAP54Q96N23 3096 aa10.25□□□□□ -0.77
TROAP-208ENST00000548817 MAGEB6P1A0A0J9YX57 407 aa10.24□□□□□ -0.77
TROAP-208ENST00000548817 DUSP11O75319 330 aaKnown RBP10.24□□□□□ -0.77
TROAP-208ENST00000548817 CD4P01730 458 aa10.24□□□□□ -0.77
TROAP-208ENST00000548817 MS4A1P11836 297 aa10.24□□□□□ -0.77
TROAP-208ENST00000548817 ATP2A2P16615 1042 aaKnown RBP10.24□□□□□ -0.77
TROAP-208ENST00000548817 CYP2C18P33260 490 aa10.24□□□□□ -0.77
TROAP-208ENST00000548817 HNRNPUQ00839 825 aaKnown RBP eCLIP10.24□□□□□ -0.77
TROAP-208ENST00000548817 OTOP2Q7RTS6 562 aa10.24□□□□□ -0.77
TROAP-208ENST00000548817 NCAPG2Q86XI2 1143 aa10.24□□□□□ -0.77
TROAP-208ENST00000548817 HIPK3Q9H422 1215 aa10.24□□□□□ -0.77
TROAP-208ENST00000548817 SPC25Q9HBM1 224 aa10.24□□□□□ -0.77
TROAP-208ENST00000548817 TLR7Q9NYK1 1049 aaKnown RBP10.24□□□□□ -0.77
TROAP-208ENST00000548817 FAM184BQ9ULE4 1060 aa10.24□□□□□ -0.77
TROAP-208ENST00000548817 USP34Q70CQ2 3546 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 DCXO43602 365 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 ASGR1P07306 291 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 COPB2P35606 906 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 RABGGTBP53611 331 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 ZNF792Q3KQV3 632 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 SLC9C2Q5TAH2 1124 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 AMOTL1Q8IY63 956 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 CLASRPQ8N2M8 674 aaKnown RBP10.23□□□□□ -0.77
TROAP-208ENST00000548817 ACER1Q8TDN7 264 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 MFSD14AQ96MC6 490 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 BCL11AQ9H165 835 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 MCM9Q9NXL9 1143 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 EXOC6BQ9Y2D4 811 aa10.23□□□□□ -0.77
TROAP-208ENST00000548817 POTEB3A0JP26 581 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 HMMRO75330 724 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 CA3P07451 260 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 IFIT2P09913 472 aaKnown RBP10.22□□□□□ -0.77
TROAP-208ENST00000548817 MYOGP15173 224 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 TAL1P17542 331 aaPredicted RBP10.22□□□□□ -0.77
TROAP-208ENST00000548817 KCTD2Q14681 263 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 PUS10Q3MIT2 529 aaKnown RBP10.22□□□□□ -0.77
TROAP-208ENST00000548817 LEXMQ3ZCV2 418 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 CEP85Q6P2H3 762 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 POTEBQ6S5H4 581 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 PHOSPHO2Q8TCD6 241 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 VTI1AQ96AJ9 217 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 SLC9A7Q96T83 725 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 MMP19Q99542 508 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 PRRX2Q99811 253 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 TANGO6Q9C0B7 1094 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 UPF3AQ9H1J1 476 aaKnown RBP10.22□□□□□ -0.77
TROAP-208ENST00000548817 ANTXR1Q9H6X2 564 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 SH2D4AQ9H788 454 aa10.22□□□□□ -0.77
TROAP-208ENST00000548817 ZBBXA8MT70 800 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 RFXAPO00287 272 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 CABYRO75952 493 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 C6orf222P0C671 652 aaPredicted RBP10.21□□□□□ -0.77
TROAP-208ENST00000548817 SSTR3P32745 418 aaPredicted RBP10.21□□□□□ -0.77
TROAP-208ENST00000548817 DSG3P32926 999 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 SHMT1P34896 483 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 PLCD1P51178 756 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 GJA9P57773 515 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 NKX3-2P78367 333 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 TAP1Q03518 808 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 PLS1Q14651 629 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 SEPT2Q15019 361 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 MAMDC4Q6UXC1 1216 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 SLC43A3Q8NBI5 491 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 RHPN1Q8TCX5 695 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 LENG1Q96BZ8 264 aaPredicted RBP10.21□□□□□ -0.77
TROAP-208ENST00000548817 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms