RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 LCE2BO14633 110 aa5.88□□□□□ -1.47
APP-217ENST00000548570 IFIT3O14879 490 aaKnown RBP5.88□□□□□ -1.47
APP-217ENST00000548570 TTLL1O95922 423 aa5.88□□□□□ -1.47
APP-217ENST00000548570 NDUFB10O96000 172 aa5.88□□□□□ -1.47
APP-217ENST00000548570 RXRAP19793 462 aa5.88□□□□□ -1.47
APP-217ENST00000548570 MCCP23508 829 aa5.88□□□□□ -1.47
APP-217ENST00000548570 PSMA5P28066 241 aa5.88□□□□□ -1.47
APP-217ENST00000548570 NF2P35240 595 aa5.88□□□□□ -1.47
APP-217ENST00000548570 LIFRP42702 1097 aa5.88□□□□□ -1.47
APP-217ENST00000548570 NT5C2P49902 561 aa5.88□□□□□ -1.47
APP-217ENST00000548570 NEK4P51957 841 aa5.88□□□□□ -1.47
APP-217ENST00000548570 HMGCS2P54868 508 aa5.88□□□□□ -1.47
APP-217ENST00000548570 BACE1P56817 501 aa5.88□□□□□ -1.47
APP-217ENST00000548570 KLRC3Q07444 240 aa5.88□□□□□ -1.47
APP-217ENST00000548570 APOBRQ0VD83 1088 aa5.88□□□□□ -1.47
APP-217ENST00000548570 FUT2Q10981 343 aa5.88□□□□□ -1.47
APP-217ENST00000548570 MTMR2Q13614 643 aa5.88□□□□□ -1.47
APP-217ENST00000548570 ME3Q16798 604 aa5.88□□□□□ -1.47
APP-217ENST00000548570 TMEM67Q5HYA8 995 aa5.88□□□□□ -1.47
APP-217ENST00000548570 TREML2Q5T2D2 321 aa5.88□□□□□ -1.47
APP-217ENST00000548570 TTBK2Q6IQ55 1244 aa5.88□□□□□ -1.47
APP-217ENST00000548570 CYP4F22Q6NT55 531 aa5.88□□□□□ -1.47
APP-217ENST00000548570 RGMBQ6NW40 437 aa5.88□□□□□ -1.47
APP-217ENST00000548570 BLOC1S2Q6QNY1 142 aa5.88□□□□□ -1.47
APP-217ENST00000548570 RALYLQ86SE5 291 aaKnown RBP5.88□□□□□ -1.47
APP-217ENST00000548570 DNAJC5GQ8N7S2 189 aa5.88□□□□□ -1.47
APP-217ENST00000548570 ZNF280CQ8ND82 737 aa5.88□□□□□ -1.47
APP-217ENST00000548570 BRF1Q92994 677 aa5.88□□□□□ -1.47
APP-217ENST00000548570 CHMP4CQ96CF2 233 aa5.88□□□□□ -1.47
APP-217ENST00000548570 SLC10A4Q96EP9 437 aa5.88□□□□□ -1.47
APP-217ENST00000548570 TMEM87BQ96K49 555 aa5.88□□□□□ -1.47
APP-217ENST00000548570 C12orf42Q96LP6 360 aa5.88□□□□□ -1.47
APP-217ENST00000548570 NUP88Q99567 741 aaPredicted RBP5.88□□□□□ -1.47
APP-217ENST00000548570 MTA3Q9BTC8 594 aa5.88□□□□□ -1.47
APP-217ENST00000548570 PRR14Q9BWN1 585 aa5.88□□□□□ -1.47
APP-217ENST00000548570 TRIM34Q9BYJ4 488 aa5.88□□□□□ -1.47
APP-217ENST00000548570 KIAA1683Q9H0B3 1180 aa5.88□□□□□ -1.47
APP-217ENST00000548570 CPVLQ9H3G5 476 aa5.88□□□□□ -1.47
APP-217ENST00000548570 R3HDMLQ9H3Y0 253 aa5.88□□□□□ -1.47
APP-217ENST00000548570 VCPKMTQ9H867 229 aa5.88□□□□□ -1.47
APP-217ENST00000548570 ZNF287Q9HBT7 754 aa5.88□□□□□ -1.47
APP-217ENST00000548570 CABP5Q9NP86 173 aa5.88□□□□□ -1.47
APP-217ENST00000548570 PDRG1Q9NUG6 133 aa5.88□□□□□ -1.47
APP-217ENST00000548570 STX8Q9UNK0 236 aa5.88□□□□□ -1.47
APP-217ENST00000548570 CDK5RAP2Q96SN8 1893 aa5.88□□□□□ -1.47
APP-217ENST00000548570 USP17L10C9JJH3 530 aa5.87□□□□□ -1.47
APP-217ENST00000548570 IGF2BP3O00425 579 aaKnown RBP eCLIP5.87□□□□□ -1.47
APP-217ENST00000548570 CXCL11O14625 94 aa5.87□□□□□ -1.47
APP-217ENST00000548570 CYTH3O43739 400 aa5.87□□□□□ -1.47
APP-217ENST00000548570 PEX10O60683 326 aa5.87□□□□□ -1.47
APP-217ENST00000548570 PLEKHA8P1O95397 391 aa5.87□□□□□ -1.47
APP-217ENST00000548570 CTDNEP1O95476 244 aa5.87□□□□□ -1.47
APP-217ENST00000548570 HMGB1P09429 215 aaKnown RBP5.87□□□□□ -1.47
APP-217ENST00000548570 GOLGA8HP0CJ92 632 aa5.87□□□□□ -1.47
APP-217ENST00000548570 PDHBP11177 359 aa5.87□□□□□ -1.47
APP-217ENST00000548570 TOP1P11387 765 aaKnown RBP5.87□□□□□ -1.47
APP-217ENST00000548570 VCAM1P19320 739 aa5.87□□□□□ -1.47
APP-217ENST00000548570 PDIA3P30101 505 aaKnown RBP5.87□□□□□ -1.47
APP-217ENST00000548570 CDC27P30260 824 aa5.87□□□□□ -1.47
APP-217ENST00000548570 VEGFBP49765 207 aa5.87□□□□□ -1.47
APP-217ENST00000548570 ZNF157P51786 506 aaPredicted RBP5.87□□□□□ -1.47
APP-217ENST00000548570 TRDNQ13061 729 aa5.87□□□□□ -1.47
APP-217ENST00000548570 RABEP1Q15276 862 aa5.87□□□□□ -1.47
APP-217ENST00000548570 ZYXQ15942 572 aaKnown RBP5.87□□□□□ -1.47
APP-217ENST00000548570 NTRK3Q16288 839 aa5.87□□□□□ -1.47
APP-217ENST00000548570 TSR1Q2NL82 804 aaKnown RBP5.87□□□□□ -1.47
APP-217ENST00000548570 APOA5Q6Q788 366 aa5.87□□□□□ -1.47
APP-217ENST00000548570 USP17L2Q6R6M4 530 aa5.87□□□□□ -1.47
APP-217ENST00000548570 ZNF654Q8IZM8 581 aa5.87□□□□□ -1.47
APP-217ENST00000548570 SPICE1Q8N0Z3 855 aa5.87□□□□□ -1.47
APP-217ENST00000548570 CMTR1Q8N1G2 835 aaKnown RBP5.87□□□□□ -1.47
APP-217ENST00000548570 FAM43AQ8N2R8 423 aa5.87□□□□□ -1.47
APP-217ENST00000548570 STAG2Q8N3U4 1231 aa5.87□□□□□ -1.47
APP-217ENST00000548570 PNMA1Q8ND90 353 aa5.87□□□□□ -1.47
APP-217ENST00000548570 GMCL1P1Q8NEA9 526 aa5.87□□□□□ -1.47
APP-217ENST00000548570 TATDN2Q93075 761 aa5.87□□□□□ -1.47
APP-217ENST00000548570 SHISA4Q96DD7 197 aa5.87□□□□□ -1.47
APP-217ENST00000548570 NCOA5Q9HCD5 579 aaKnown RBP5.87□□□□□ -1.47
APP-217ENST00000548570 PICK1Q9NRD5 415 aa5.87□□□□□ -1.47
APP-217ENST00000548570 FBXO28Q9NVF7 368 aa5.87□□□□□ -1.47
APP-217ENST00000548570 MAD2L2Q9UI95 211 aa5.87□□□□□ -1.47
APP-217ENST00000548570 PNMA3Q9UL41 463 aa5.87□□□□□ -1.47
APP-217ENST00000548570 ABT1Q9ULW3 272 aaKnown RBP5.87□□□□□ -1.47
APP-217ENST00000548570 SYNPO2Q9UMS6 1093 aa5.87□□□□□ -1.47
APP-217ENST00000548570 CSADQ9Y600 493 aa5.87□□□□□ -1.47
APP-217ENST00000548570 CYP46A1Q9Y6A2 500 aa5.87□□□□□ -1.47
APP-217ENST00000548570 NID2Q14112 1375 aa5.87□□□□□ -1.47
APP-217ENST00000548570 MYH7P12883 1935 aa5.86□□□□□ -1.47
APP-217ENST00000548570 GREB1LQ9C091 1923 aaPredicted RBP5.86□□□□□ -1.47
APP-217ENST00000548570 ECM29Q5VYK3 1845 aa5.86□□□□□ -1.47
APP-217ENST00000548570 ADGRA2Q96PE1 1338 aa5.86□□□□□ -1.47
APP-217ENST00000548570 KLF18A0A0U1RQI7 1052 aa5.86□□□□□ -1.47
APP-217ENST00000548570 PALM3A6NDB9 673 aaPredicted RBP5.86□□□□□ -1.47
APP-217ENST00000548570 BTBD19C9JJ37 291 aa5.86□□□□□ -1.47
APP-217ENST00000548570 SMAPO00193 183 aa5.86□□□□□ -1.47
APP-217ENST00000548570 EIF5BO60841 1220 aaKnown RBP5.86□□□□□ -1.47
APP-217ENST00000548570 PPFIA3O75145 1194 aa5.86□□□□□ -1.47
APP-217ENST00000548570 CNMDO75829 334 aa5.86□□□□□ -1.47
APP-217ENST00000548570 ZBTB48P10074 688 aaPredicted RBP5.86□□□□□ -1.47
APP-217ENST00000548570 HSPA6P17066 643 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms