RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TBC1D10BQ4KMP7 808 aaPredicted RBP13.67□□□□□ -0.22
CCDC38-202ENST00000546386 KLHL10Q6JEL2 608 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 ACER1Q8TDN7 264 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 BRMS1Q9HCU9 246 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 NAV1Q8NEY1 1877 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 CCDC194A0A1B0GVG4 234 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 A0A1W2PRG0 241 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L15C9J2P7 530 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L13C9JLJ4 530 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L11C9JVI0 530 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L18D6R9N7 530 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L22D6RA61 530 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L17D6RBQ6 530 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L19D6RCP7 530 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L20D6RJB6 530 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 CCNT1O60563 726 aaKnown RBP13.67□□□□□ -0.22
CCDC38-202ENST00000546386 ATP1A3P13637 1013 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 BMP6P22004 513 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 PRELPP51888 382 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 LRMPQ12912 555 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 RESP18Q5W5W9 173 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 SIAH1Q8IUQ4 282 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 TNFRSF25Q93038 417 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 SEC63Q9UGP8 760 aaKnown RBP13.67□□□□□ -0.22
CCDC38-202ENST00000546386 NRXN2Q9P2S2 1712 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
CCDC38-202ENST00000546386 KIAA1755Q5JYT7 1200 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 RSBN1LQ6PCB5 846 aaPredicted RBP13.66□□□□□ -0.22
CCDC38-202ENST00000546386 RASSF8Q8NHQ8 419 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 PI4KBQ9UBF8 816 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 A0A1W2PQ27 194 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 A0A1W2PQ64 194 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 A0A1W2PQD8 194 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 PTPREP23469 700 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 SLC1A4P43007 532 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 STX17P56962 302 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 KARSQ15046 597 aaKnown RBP13.66□□□□□ -0.22
CCDC38-202ENST00000546386 ATL3Q6DD88 541 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 FILIP1Q7Z7B0 1213 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
CCDC38-202ENST00000546386 DHX40Q8IX18 779 aaKnown RBP13.66□□□□□ -0.22
CCDC38-202ENST00000546386 RRP36Q96EU6 259 aaKnown RBP13.66□□□□□ -0.22
CCDC38-202ENST00000546386 PDLIM2Q96JY6 352 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCDC38-202ENST00000546386 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCDC38-202ENST00000546386 SMCHD1A6NHR9 2005 aa13.66□□□□□ -0.22
CCDC38-202ENST00000546386 ROBO3Q96MS0 1386 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 MYH15Q9Y2K3 1946 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 GOLGA6L19H0YKK7 550 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.22
CCDC38-202ENST00000546386 NIM1KQ8IY84 436 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 JMYQ8N9B5 988 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 MTA3Q9BTC8 594 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 JMJD4Q9H9V9 463 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 BARHL2Q9NY43 387 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 PCDHA4Q9UN74 947 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 LRRC37AA6NMS7 1700 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 PPP6R2O75170 966 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 PTGS1P23219 599 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 TNNI2P48788 182 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 ICA1Q05084 483 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 IQCB1Q15051 598 aa13.65□□□□□ -0.22
CCDC38-202ENST00000546386 RBM43Q6ZSC3 357 aaKnown RBP13.65□□□□□ -0.22
CCDC38-202ENST00000546386 NFKBIEO00221 500 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 GOLGA8FQ08AF8 430 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 GOLGA8DPQ0D2H9 430 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 STX1AQ16623 288 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 ABCB5Q2M3G0 1257 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 KRBA2Q6ZNG9 492 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.64□□□□□ -0.23
CCDC38-202ENST00000546386 ZNF70Q9UC06 446 aaPredicted RBP13.64□□□□□ -0.23
CCDC38-202ENST00000546386 HPSEQ9Y251 543 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 WNT10BO00744 389 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 CUTAO60888 179 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 LAMB1P07942 1786 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 NID2Q14112 1375 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 TCP11L1Q9NUJ3 509 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 SERPINA10Q9UK55 444 aa13.64□□□□□ -0.23
CCDC38-202ENST00000546386 SRPRBQ9Y5M8 271 aaKnown RBP13.64□□□□□ -0.23
CCDC38-202ENST00000546386 F5H6K3 240 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 TDP2O95551 362 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 MSNP26038 577 aaKnown RBP13.63□□□□□ -0.23
CCDC38-202ENST00000546386 POLD1P28340 1107 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 HOXA13P31271 388 aaPredicted RBP13.63□□□□□ -0.23
CCDC38-202ENST00000546386 TECP42680 631 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 UBXN2AP68543 259 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 KLRC3Q07444 240 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 PPP2R5BQ15173 497 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 RTKN2Q8IZC4 609 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 JDP2Q8WYK2 163 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 TMEM232C9JQI7 657 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 TXKP42681 527 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 CCDC144BQ3MJ40 725 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 SLFN13Q68D06 897 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 CC2D2BQ6DHV5 1058 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms