RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CCDC96Q2M329 555 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 MFSD14CQ5VZR4 134 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 REPS2Q8NFH8 660 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 U2AF1L4Q8WU68 220 aaKnown RBP18.51■□□□□ 0.55
CCDC78-216ENST00000544996 DCAF4Q8WV16 495 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 CHMP4CQ96CF2 233 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 TMEM47Q9BQJ4 181 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 ZNF214Q9UL59 606 aaPredicted RBP18.51■□□□□ 0.55
CCDC78-216ENST00000544996 CENPFP49454 3210 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 A0A0G2JMZ2 1700 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 B4E1Z4 1266 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 ATP2A1O14983 1001 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 PLA2G6O60733 806 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 PRKAR2AP13861 404 aaKnown RBP18.5■□□□□ 0.55
CCDC78-216ENST00000544996 PTH1RQ03431 593 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 TRDNQ13061 729 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 CCL14Q16627 93 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 SNRNP48Q6IEG0 339 aaKnown RBP18.5■□□□□ 0.55
CCDC78-216ENST00000544996 KCTD1Q719H9 257 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 DGKHQ86XP1 1220 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 CPXCR1Q8N123 301 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 DEFB118Q96PH6 123 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 ZKSCAN3Q9BRR0 538 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.5■□□□□ 0.55
CCDC78-216ENST00000544996 SLC38A10Q9HBR0 1119 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 PAK6Q9NQU5 681 aaPredicted RBP18.5■□□□□ 0.55
CCDC78-216ENST00000544996 RLFQ13129 1914 aa18.5■□□□□ 0.55
CCDC78-216ENST00000544996 SGPL1O95470 568 aa18.49■□□□□ 0.55
CCDC78-216ENST00000544996 SLC4A3P48751 1232 aa18.49■□□□□ 0.55
CCDC78-216ENST00000544996 OAZ1P54368 228 aa18.49■□□□□ 0.55
CCDC78-216ENST00000544996 TRIM32Q13049 653 aa18.49■□□□□ 0.55
CCDC78-216ENST00000544996 KCTD2Q14681 263 aa18.49■□□□□ 0.55
CCDC78-216ENST00000544996 SKAP1Q86WV1 359 aa18.49■□□□□ 0.55
CCDC78-216ENST00000544996 ZSCAN10Q96SZ4 725 aaPredicted RBP18.49■□□□□ 0.55
CCDC78-216ENST00000544996 MMP19Q99542 508 aa18.49■□□□□ 0.55
CCDC78-216ENST00000544996 MYH4Q9Y623 1939 aa18.49■□□□□ 0.55
CCDC78-216ENST00000544996 TFRCP02786 760 aaKnown RBP18.48■□□□□ 0.55
CCDC78-216ENST00000544996 MAP3K21Q5TCX8 1036 aa18.48■□□□□ 0.55
CCDC78-216ENST00000544996 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
CCDC78-216ENST00000544996 NPLOC4Q8TAT6 608 aa18.48■□□□□ 0.55
CCDC78-216ENST00000544996 MAP4K1Q92918 833 aa18.48■□□□□ 0.55
CCDC78-216ENST00000544996 UBAC1Q9BSL1 405 aa18.48■□□□□ 0.55
CCDC78-216ENST00000544996 RAVER2Q9HCJ3 691 aaKnown RBP18.48■□□□□ 0.55
CCDC78-216ENST00000544996 ZSWIM5Q9P217 1185 aa18.48■□□□□ 0.55
CCDC78-216ENST00000544996 RBBP6Q7Z6E9 1792 aaKnown RBP18.47■□□□□ 0.55
CCDC78-216ENST00000544996 DOCK3Q8IZD9 2030 aa18.47■□□□□ 0.55
CCDC78-216ENST00000544996 CACNB2Q08289 660 aaPredicted RBP18.47■□□□□ 0.55
CCDC78-216ENST00000544996 KAT14Q9H8E8 782 aa18.47■□□□□ 0.55
CCDC78-216ENST00000544996 FBXO40Q9UH90 709 aa18.47■□□□□ 0.55
CCDC78-216ENST00000544996 COBLO75128 1261 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 CYP21A2P08686 494 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 PDHBP11177 359 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 ERICH6BQ5W0A0 696 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 OLFML2BQ68BL8 750 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 RALYLQ86SE5 291 aaKnown RBP18.46■□□□□ 0.55
CCDC78-216ENST00000544996 CHST13Q8NET6 341 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 ANKS1AQ92625 1134 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 SHISA4Q96DD7 197 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 ESYT1Q9BSJ8 1104 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 FLRT1Q9NZU1 646 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 PRR12Q9ULL5 1215 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 RIPK3Q9Y572 518 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
CCDC78-216ENST00000544996 RASGRP2Q7LDG7 609 aa18.45■□□□□ 0.54
CCDC78-216ENST00000544996 DDX11Q96FC9 970 aa18.45■□□□□ 0.54
CCDC78-216ENST00000544996 GPCPD1Q9NPB8 672 aa18.45■□□□□ 0.54
CCDC78-216ENST00000544996 RBM8AQ9Y5S9 174 aaKnown RBP18.45■□□□□ 0.54
CCDC78-216ENST00000544996 TNKSO95271 1327 aa18.45■□□□□ 0.54
CCDC78-216ENST00000544996 FRMPD2Q68DX3 1309 aaPredicted RBP18.45■□□□□ 0.54
CCDC78-216ENST00000544996 KIAA0100Q14667 2235 aaKnown RBP18.45■□□□□ 0.54
CCDC78-216ENST00000544996 PARP14Q460N5 1801 aa18.44■□□□□ 0.54
CCDC78-216ENST00000544996 PGK2P07205 417 aa18.44■□□□□ 0.54
CCDC78-216ENST00000544996 CYP2C19P33261 490 aa18.44■□□□□ 0.54
CCDC78-216ENST00000544996 ZNF543Q08ER8 600 aa18.44■□□□□ 0.54
CCDC78-216ENST00000544996 GPATCH4Q5T3I0 446 aaKnown RBP18.44■□□□□ 0.54
CCDC78-216ENST00000544996 BTNL9Q6UXG8 535 aa18.44■□□□□ 0.54
CCDC78-216ENST00000544996 ENAHQ8N8S7 591 aaPredicted RBP18.44■□□□□ 0.54
CCDC78-216ENST00000544996 PNMA1Q8ND90 353 aa18.44■□□□□ 0.54
CCDC78-216ENST00000544996 NCOA7Q8NI08 942 aa18.44■□□□□ 0.54
CCDC78-216ENST00000544996 CRISPLD2Q9H0B8 497 aa18.44■□□□□ 0.54
CCDC78-216ENST00000544996 DIS3Q9Y2L1 958 aaKnown RBP18.44■□□□□ 0.54
CCDC78-216ENST00000544996 LAMA4Q16363 1823 aa18.44■□□□□ 0.54
CCDC78-216ENST00000544996 E7EWF7 191 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 CDC45O75419 566 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 FARP2O94887 1054 aaPredicted RBP18.43■□□□□ 0.54
CCDC78-216ENST00000544996 SNHG28P0DPA3 235 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 SLC16A2P36021 539 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 TKFCQ3LXA3 575 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 IFIT1BQ5T764 474 aaKnown RBP18.43■□□□□ 0.54
CCDC78-216ENST00000544996 SYDE2Q5VT97 1194 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 TTBK2Q6IQ55 1244 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 CCDC174Q6PII3 467 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 ANKRD35Q8N283 1001 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 MAML3Q96JK9 1138 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 ANO2Q9NQ90 1003 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 HOMER2Q9NSB8 354 aa18.43■□□□□ 0.54
CCDC78-216ENST00000544996 ERICH2A1L162 156 aa18.42■□□□□ 0.54
CCDC78-216ENST00000544996 CNGA1P29973 690 aa18.42■□□□□ 0.54
CCDC78-216ENST00000544996 CCND3P30281 292 aaPredicted RBP18.42■□□□□ 0.54
CCDC78-216ENST00000544996 SART3Q15020 963 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms