RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 DIS3Q9Y2L1 958 aaKnown RBP14.35□□□□□ -0.11
PTPN6-220ENST00000543115 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.35□□□□□ -0.11
PTPN6-220ENST00000543115 ATP2A1O14983 1001 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
PTPN6-220ENST00000543115 ZNF865P0CJ78 1059 aaPredicted RBP14.34□□□□□ -0.11
PTPN6-220ENST00000543115 COPB2P35606 906 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 SLC4A3P48751 1232 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 RTP1P59025 263 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 LRRC41Q15345 812 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 SLFN13Q68D06 897 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 TDHQ8IZJ6 230 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 LENG1Q96BZ8 264 aaPredicted RBP14.34□□□□□ -0.11
PTPN6-220ENST00000543115 CHMP4CQ96CF2 233 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 EVI5LQ96CN4 794 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 UBE2OQ9C0C9 1292 aaKnown RBP14.34□□□□□ -0.11
PTPN6-220ENST00000543115 SLC38A10Q9HBR0 1119 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 SYNPO2Q9UMS6 1093 aa14.34□□□□□ -0.11
PTPN6-220ENST00000543115 DNAJC25-GNG10A0A024R161 153 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 KBTBD13C9JR72 458 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 ZBED4O75132 1171 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 SLC3A2P08195 630 aaKnown RBP14.33□□□□□ -0.12
PTPN6-220ENST00000543115 BMP3P12645 472 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 SLC39A5Q6ZMH5 540 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 RASGRP2Q7LDG7 609 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 FERMT2Q96AC1 680 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 FAM227BQ96M60 508 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 IL17RBQ9NRM6 502 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 ZBTB47Q9UFB7 747 aaPredicted RBP14.33□□□□□ -0.12
PTPN6-220ENST00000543115 NRBP1Q9UHY1 535 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 FEM1BQ9UK73 627 aa14.33□□□□□ -0.12
PTPN6-220ENST00000543115 A0A0D9SFI3 127 aa14.32□□□□□ -0.12
PTPN6-220ENST00000543115 NMT2O60551 498 aa14.32□□□□□ -0.12
PTPN6-220ENST00000543115 SNAI1O95863 264 aaPredicted RBP14.32□□□□□ -0.12
PTPN6-220ENST00000543115 PGK1P00558 417 aa14.32□□□□□ -0.12
PTPN6-220ENST00000543115 ADCYAP1R1P41586 468 aa14.32□□□□□ -0.12
PTPN6-220ENST00000543115 SNX17Q15036 470 aa14.32□□□□□ -0.12
PTPN6-220ENST00000543115 DDX11Q96FC9 970 aa14.32□□□□□ -0.12
PTPN6-220ENST00000543115 FGD4Q96M96 766 aa14.32□□□□□ -0.12
PTPN6-220ENST00000543115 LNPKQ9C0E8 428 aa14.32□□□□□ -0.12
PTPN6-220ENST00000543115 XPNPEP3Q9NQH7 507 aa14.32□□□□□ -0.12
PTPN6-220ENST00000543115 ATP11BQ9Y2G3 1177 aa14.32□□□□□ -0.12
PTPN6-220ENST00000543115 MYH4Q9Y623 1939 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 LAMA3Q16787 3333 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 TSPY2A6NKD2 308 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 TMEM232C9JQI7 657 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 RARBP10826 455 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 MCCP23508 829 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 LRIT3Q3SXY7 679 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 TRIM60Q495X7 471 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 MAMDC4Q6UXC1 1216 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.31□□□□□ -0.12
PTPN6-220ENST00000543115 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 HELLSQ9NRZ9 838 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 ANAPC4Q9UJX5 808 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 STX8Q9UNK0 236 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 CTDP1Q9Y5B0 961 aaPredicted RBP14.31□□□□□ -0.12
PTPN6-220ENST00000543115 ZNF536O15090 1300 aa14.31□□□□□ -0.12
PTPN6-220ENST00000543115 PLXNA1Q9UIW2 1896 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 ADAMTS4O75173 837 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 AKR1A1P14550 325 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 STAT2P52630 851 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 OAZ1P54368 228 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 B4GALNT3Q6L9W6 998 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 KCTD1Q719H9 257 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 ZNF589Q86UQ0 364 aaPredicted RBP14.3□□□□□ -0.12
PTPN6-220ENST00000543115 SMC5Q8IY18 1101 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 MSL3Q8N5Y2 521 aaKnown RBP14.3□□□□□ -0.12
PTPN6-220ENST00000543115 HOMER2Q9NSB8 354 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 ISY1Q9ULR0 285 aaKnown RBP14.3□□□□□ -0.12
PTPN6-220ENST00000543115 PHF24Q9UPV7 400 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 CNPY2Q9Y2B0 182 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 ZNFX1Q9P2E3 1918 aaKnown RBP14.3□□□□□ -0.12
PTPN6-220ENST00000543115 SYNGAP1Q96PV0 1343 aa14.3□□□□□ -0.12
PTPN6-220ENST00000543115 ADCY6O43306 1168 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 RANBP6O60518 1105 aaKnown RBP14.29□□□□□ -0.12
PTPN6-220ENST00000543115 IGHDP01880 384 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 FGAP02671 866 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 FGRP09769 529 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 SLC1A4P43007 532 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 NOVP48745 357 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 SNAP25P60880 206 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 IRX5P78411 483 aaPredicted RBP14.29□□□□□ -0.12
PTPN6-220ENST00000543115 NMIQ13287 307 aaPredicted RBP14.29□□□□□ -0.12
PTPN6-220ENST00000543115 ALX1Q15699 326 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 MCMDC2Q4G0Z9 681 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 Q7L0L9 218 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 SH3RF1Q7Z6J0 888 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 ANKRD35Q8N283 1001 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 CHST13Q8NET6 341 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 STAG1Q8WVM7 1258 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 AGBL1Q96MI9 1066 aa14.29□□□□□ -0.12
PTPN6-220ENST00000543115 LBHD1Q9BQE6 289 aaPredicted RBP14.29□□□□□ -0.12
PTPN6-220ENST00000543115 ZHX1Q9UKY1 873 aaPredicted RBP14.29□□□□□ -0.12
PTPN6-220ENST00000543115 A0A1W2PQ45 241 aaPredicted RBP14.28□□□□□ -0.12
PTPN6-220ENST00000543115 A0A1W2PQY0 241 aa14.28□□□□□ -0.12
PTPN6-220ENST00000543115 ORC4O43929 436 aa14.28□□□□□ -0.12
PTPN6-220ENST00000543115 HSPD1P10809 573 aaKnown RBP14.28□□□□□ -0.12
PTPN6-220ENST00000543115 CNTN2Q02246 1040 aa14.28□□□□□ -0.12
PTPN6-220ENST00000543115 IKQ13123 557 aaPredicted RBP14.28□□□□□ -0.12
PTPN6-220ENST00000543115 C1orf53Q5VUE5 145 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms