RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 TRIM75PA6NK02 468 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 MPHOSPH10O00566 681 aaKnown RBP23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 ATP2B1P20020 1258 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 JAG1P78504 1218 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 CERKLQ49MI3 558 aaPredicted RBP23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 DRC7Q8IY82 874 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 DPF2Q92785 391 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 BPIFA3Q9BQP9 254 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 PGAP2Q9UHJ9 254 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 SRPRBQ9Y5M8 271 aaKnown RBP23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 GOLGA8HP0CJ92 632 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 GNAQP50148 359 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 PFKFB3Q16875 520 aaPredicted RBP23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 RBM26Q5T8P6 1007 aaKnown RBP23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 MICALL2Q8IY33 904 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 LRRC47Q8N1G4 583 aaKnown RBP23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 TMEM39BQ9GZU3 492 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 CLIP2Q9UDT6 1046 aa23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 SCAF8Q9UPN6 1271 aaKnown RBP23.16■■□□□ 1.3
PACSIN3-211ENST00000539589 CYTH3O43739 400 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 BMP15O95972 392 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 DPCR1Q3MIW9 517 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 USP17L2Q6R6M4 530 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 KRBA2Q6ZNG9 492 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 SAMD7Q7Z3H4 446 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 ELOA2Q8IYF1 753 aaPredicted RBP23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 CNOT7Q9UIV1 285 aaKnown RBP23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 TTLL1O95922 423 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 LMNB1P20700 586 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 CDC25BP30305 580 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 AOPEPQ8N6M6 819 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 CNNM3Q8NE01 707 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 HOOK1Q9UJC3 728 aaKnown RBP23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 TUBE1Q9UJT0 475 aa23.15■■□□□ 1.3
PACSIN3-211ENST00000539589 USP17L5A8MUK1 530 aa23.14■■□□□ 1.29
PACSIN3-211ENST00000539589 GDF11O95390 407 aa23.14■■□□□ 1.29
PACSIN3-211ENST00000539589 NLRP5P59047 1200 aa23.14■■□□□ 1.29
PACSIN3-211ENST00000539589 FAM83AQ86UY5 434 aa23.14■■□□□ 1.29
PACSIN3-211ENST00000539589 PIBF1Q8WXW3 757 aa23.14■■□□□ 1.29
PACSIN3-211ENST00000539589 NAP1L5Q96NT1 182 aaPredicted RBP23.14■■□□□ 1.29
PACSIN3-211ENST00000539589 TRIM34Q9BYJ4 488 aa23.14■■□□□ 1.29
PACSIN3-211ENST00000539589 CPVLQ9H3G5 476 aa23.14■■□□□ 1.29
PACSIN3-211ENST00000539589 ASTN2O75129 1339 aaPredicted RBP23.14■■□□□ 1.29
PACSIN3-211ENST00000539589 BIN1O00499 593 aa23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 YBX3P16989 372 aaKnown RBP eCLIP23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 MMP14P50281 582 aa23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 NPY5RQ15761 445 aa23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 LONRF3Q496Y0 759 aa23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 SIAH1Q8IUQ4 282 aa23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 TNFRSF25Q93038 417 aa23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 MYO1BO43795 1136 aa23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 PDHBP11177 359 aa23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 TBC1D10BQ4KMP7 808 aaPredicted RBP23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 EARS2Q5JPH6 523 aaKnown RBP23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 MRFAP1L1Q96HT8 127 aa23.13■■□□□ 1.29
PACSIN3-211ENST00000539589 FAM205CA6NFA0 338 aa23.12■■□□□ 1.29
PACSIN3-211ENST00000539589 SNHG28P0DPA3 235 aa23.12■■□□□ 1.29
PACSIN3-211ENST00000539589 SEPT2Q15019 361 aa23.12■■□□□ 1.29
PACSIN3-211ENST00000539589 SPECC1Q5M775 1068 aa23.12■■□□□ 1.29
PACSIN3-211ENST00000539589 KLRF2D3W0D1 207 aa23.11■■□□□ 1.29
PACSIN3-211ENST00000539589 PARP1P09874 1014 aaKnown RBP23.11■■□□□ 1.29
PACSIN3-211ENST00000539589 CALML3P27482 149 aa23.11■■□□□ 1.29
PACSIN3-211ENST00000539589 GRIN1Q05586 938 aa23.11■■□□□ 1.29
PACSIN3-211ENST00000539589 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.11■■□□□ 1.29
PACSIN3-211ENST00000539589 SH3GLB2Q9NR46 395 aa23.11■■□□□ 1.29
PACSIN3-211ENST00000539589 HERC5Q9UII4 1024 aaKnown RBP23.11■■□□□ 1.29
PACSIN3-211ENST00000539589 PNOCQ13519 176 aa23.11■■□□□ 1.29
PACSIN3-211ENST00000539589 EEF2P13639 858 aaKnown RBP23.1■■□□□ 1.29
PACSIN3-211ENST00000539589 TRAPPC10P48553 1259 aa23.1■■□□□ 1.29
PACSIN3-211ENST00000539589 TPM4P67936 248 aa23.1■■□□□ 1.29
PACSIN3-211ENST00000539589 ATP2B2Q01814 1243 aa23.1■■□□□ 1.29
PACSIN3-211ENST00000539589 ABCB5Q2M3G0 1257 aa23.1■■□□□ 1.29
PACSIN3-211ENST00000539589 LZTS2Q9BRK4 669 aa23.1■■□□□ 1.29
PACSIN3-211ENST00000539589 KCNF1Q9H3M0 494 aa23.1■■□□□ 1.29
PACSIN3-211ENST00000539589 SMTNL1A8MU46 457 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 PTGS1P23219 599 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 TMEM179Q6ZVK1 233 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 CCDC186Q7Z3E2 898 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 MKL1Q969V6 931 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 FERMT2Q96AC1 680 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 CSRNP2Q9H175 543 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 FRMPD2Q68DX3 1309 aaPredicted RBP23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 POLR2DO15514 142 aaKnown RBP23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 GH2P01242 217 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 RASA3Q14644 834 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 TTC38Q5R3I4 469 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 KANK3Q6NY19 840 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 SPZ1Q9BXG8 430 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 KANSL2Q9H9L4 492 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 NYAP2Q9P242 653 aa23.09■■□□□ 1.29
PACSIN3-211ENST00000539589 MIGA2Q7L4E1 593 aa23.08■■□□□ 1.29
PACSIN3-211ENST00000539589 ADAMTS3O15072 1205 aa23.08■■□□□ 1.28
PACSIN3-211ENST00000539589 MDM2Q00987 491 aaPredicted RBP23.08■■□□□ 1.28
PACSIN3-211ENST00000539589 NOLC1Q14978 699 aaKnown RBP eCLIP23.08■■□□□ 1.28
PACSIN3-211ENST00000539589 KIF4BQ2VIQ3 1234 aa23.08■■□□□ 1.28
PACSIN3-211ENST00000539589 TEPSINQ96N21 525 aa23.08■■□□□ 1.28
PACSIN3-211ENST00000539589 UBA5Q9GZZ9 404 aa23.08■■□□□ 1.28
PACSIN3-211ENST00000539589 POLR2AP24928 1970 aaKnown RBP23.07■■□□□ 1.28
PACSIN3-211ENST00000539589 IKBKBO14920 756 aa23.07■■□□□ 1.28
PACSIN3-211ENST00000539589 TBC1D12O60347 775 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms