RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 RALYLQ86SE5 291 aaKnown RBP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 VGLL2Q8N8G2 317 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 PUS7LQ9H0K6 701 aaKnown RBP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 L2HGDHQ9H9P8 463 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 ANGEL1Q9UNK9 670 aaKnown RBP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 TTLL8A6PVC2 850 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 ERVH48-1M5A8F1 160 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 CPLX1O14810 134 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 CUTAO60888 179 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 CDKL5O76039 1030 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 DKK1O94907 266 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 POLR3DP05423 398 aaPredicted RBP6.59□□□□□ -1.35
VPS33A-203ENST00000536212 ATP2B4P23634 1241 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 ARID4AP29374 1257 aaPredicted RBP6.59□□□□□ -1.35
VPS33A-203ENST00000536212 MCAMP43121 646 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 HAND2P61296 217 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 CBX1P83916 185 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 NTRK3Q16288 839 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 CCDC93Q567U6 631 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 HSP90AB3PQ58FF7 597 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 GORABQ5T7V8 394 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 KRT40Q6A162 431 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 PHLDB3Q6NSJ2 640 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 ARMCX5Q6P1M9 558 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 SHC4Q6S5L8 630 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 SYNE3Q6ZMZ3 975 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 CYB5R4Q7L1T6 521 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 FILIP1Q7Z7B0 1213 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 SGMS1Q86VZ5 419 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 TBC1D10CQ8IV04 446 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 CCDC155Q8N6L0 562 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 JMYQ8N9B5 988 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 ZNF397Q8NF99 534 aaPredicted RBP6.59□□□□□ -1.35
VPS33A-203ENST00000536212 TTLL11Q8NHH1 800 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 KIF18AQ8NI77 898 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 IGDCC4Q8TDY8 1250 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 MAP3K14Q99558 947 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 ALG1Q9BT22 464 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 MTA3Q9BTC8 594 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 XPO4Q9C0E2 1151 aaKnown RBP6.59□□□□□ -1.35
VPS33A-203ENST00000536212 HSD3B7Q9H2F3 369 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 TMX1Q9H3N1 280 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 IFNKQ9P0W0 207 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 SLAIN2Q9P270 581 aa6.59□□□□□ -1.35
VPS33A-203ENST00000536212 NAP1L2Q9ULW6 460 aaPredicted RBP6.59□□□□□ -1.35
VPS33A-203ENST00000536212 C4AP0C0L4 1744 aa6.59□□□□□ -1.36
VPS33A-203ENST00000536212 C4BP0C0L5 1744 aa6.59□□□□□ -1.36
VPS33A-203ENST00000536212 LRP5O75197 1615 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 MROH7-TTC4A0A0A0MT08 1334 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 TCRBV5S4A2TA0A5A2 114 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 SFI1A8K8P3 1242 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 CCP110O43303 1012 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 SLU7O95391 586 aaKnown RBP6.58□□□□□ -1.36
VPS33A-203ENST00000536212 UQCRFS1P1P0C7P4 283 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 FGFR2P21802 821 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 FSHRP23945 695 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 LIFRP42702 1097 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 SYKP43405 635 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 METAP2P50579 478 aaKnown RBP eCLIP6.58□□□□□ -1.36
VPS33A-203ENST00000536212 CTSWP56202 376 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 FANCCQ00597 558 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 GABPB1Q06547 395 aaPredicted RBP6.58□□□□□ -1.36
VPS33A-203ENST00000536212 DHX9Q08211 1270 aaKnown RBP6.58□□□□□ -1.36
VPS33A-203ENST00000536212 PLA2G4EQ3MJ16 856 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 METTL24Q5JXM2 366 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 RESP18Q5W5W9 173 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 CPLX2Q6PUV4 134 aaKnown RBP6.58□□□□□ -1.36
VPS33A-203ENST00000536212 APOA5Q6Q788 366 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 KIF6Q6ZMV9 814 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 TOM1L2Q6ZVM7 507 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 NLRP10Q86W26 655 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 FCHSD1Q86WN1 690 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 DHX37Q8IY37 1157 aaKnown RBP6.58□□□□□ -1.36
VPS33A-203ENST00000536212 ERCC4Q92889 916 aaPredicted RBP6.58□□□□□ -1.36
VPS33A-203ENST00000536212 PPP1R13BQ96KQ4 1090 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 STRBPQ96SI9 672 aaKnown RBP6.58□□□□□ -1.36
VPS33A-203ENST00000536212 SPOCK3Q9BQ16 436 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 PIH1D3Q9NQM4 214 aaKnown RBP6.58□□□□□ -1.36
VPS33A-203ENST00000536212 PRDM11Q9NQV5 511 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 GJB4Q9NTQ9 266 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 ZNF215Q9UL58 517 aaPredicted RBP6.58□□□□□ -1.36
VPS33A-203ENST00000536212 SHANK3Q9BYB0 1731 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 LRP6O75581 1613 aa6.58□□□□□ -1.36
VPS33A-203ENST00000536212 STRCP1A6NGW2 1772 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 ANKRD18BA2A2Z9 1011 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 SLC35F4A4IF30 521 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 ERVV-1B6SEH8 477 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 CBFA2T2O43439 604 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 NRDCO43847 1150 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 KIF20AO95235 890 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 PDE8BO95263 885 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 SMC2O95347 1197 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 PDE6AP16499 860 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 ITGA6P23229 1130 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 SFPQP23246 707 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS33A-203ENST00000536212 CDC27P30260 824 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 SCTRP47872 440 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 SARSP49591 514 aaKnown RBP6.57□□□□□ -1.36
VPS33A-203ENST00000536212 RCAN1P53805 252 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms