RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ISY1Q9ULR0 285 aaKnown RBP19.21■□□□□ 0.67
CLSTN3-204ENST00000535313 MYH4Q9Y623 1939 aa19.21■□□□□ 0.67
CLSTN3-204ENST00000535313 TSPY2A6NKD2 308 aa19.2■□□□□ 0.66
CLSTN3-204ENST00000535313 KBTBD13C9JR72 458 aa19.2■□□□□ 0.66
CLSTN3-204ENST00000535313 MYCNP04198 464 aaPredicted RBP19.2■□□□□ 0.66
CLSTN3-204ENST00000535313 BMP3P12645 472 aa19.2■□□□□ 0.66
CLSTN3-204ENST00000535313 BMP8BP34820 402 aa19.2■□□□□ 0.66
CLSTN3-204ENST00000535313 CTDSPL2Q05D32 466 aa19.2■□□□□ 0.66
CLSTN3-204ENST00000535313 ZNF792Q3KQV3 632 aa19.2■□□□□ 0.66
CLSTN3-204ENST00000535313 GJC2Q5T442 439 aaPredicted RBP19.2■□□□□ 0.66
CLSTN3-204ENST00000535313 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
CLSTN3-204ENST00000535313 TINF2Q9BSI4 451 aa19.2■□□□□ 0.66
CLSTN3-204ENST00000535313 ZNFX1Q9P2E3 1918 aaKnown RBP19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 TRIM6-TRIM34B2RNG4 842 aa19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 ATP2A1O14983 1001 aa19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 FOXP2O15409 715 aa19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 MAGEA10P43363 369 aaPredicted RBP19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 MCMDC2Q4G0Z9 681 aa19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 VPS53Q5VIR6 699 aa19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 B4GALNT3Q6L9W6 998 aa19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 SLC38A10Q9HBR0 1119 aa19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 STX8Q9UNK0 236 aa19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.19■□□□□ 0.66
CLSTN3-204ENST00000535313 RANBP6O60518 1105 aaKnown RBP19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 FDX1P10109 184 aa19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 SLC1A4P43007 532 aa19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 ATN1P54259 1190 aaPredicted RBP19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 ALX1Q15699 326 aa19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 SMC5Q8IY18 1101 aa19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 FAM227BQ96M60 508 aa19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 RAVER2Q9HCJ3 691 aaKnown RBP19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 ANAPC4Q9UJX5 808 aa19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 CNPY2Q9Y2B0 182 aa19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 RIPK3Q9Y572 518 aa19.18■□□□□ 0.66
CLSTN3-204ENST00000535313 DNAH12Q6ZR08 3092 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 SZT2Q5T011 3432 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 A0A0D9SFI3 127 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 TMEM232C9JQI7 657 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 RARBP10826 455 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 STAT2P52630 851 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 OAZ1P54368 228 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 IKQ13123 557 aaPredicted RBP19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 FAM160B2Q86V87 743 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 MSL3Q8N5Y2 521 aaKnown RBP19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 CHURC1Q8WUH1 139 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 RILPL2Q969X0 211 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 GMCL1Q96IK5 515 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 INCENPQ9NQS7 918 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 FBXO40Q9UH90 709 aa19.17■□□□□ 0.66
CLSTN3-204ENST00000535313 MCCP23508 829 aa19.16■□□□□ 0.66
CLSTN3-204ENST00000535313 CHD1LQ86WJ1 897 aa19.16■□□□□ 0.66
CLSTN3-204ENST00000535313 ANKRD35Q8N283 1001 aa19.16■□□□□ 0.66
CLSTN3-204ENST00000535313 CHST13Q8NET6 341 aa19.16■□□□□ 0.66
CLSTN3-204ENST00000535313 STAG1Q8WVM7 1258 aa19.16■□□□□ 0.66
CLSTN3-204ENST00000535313 UBE2OQ9C0C9 1292 aaKnown RBP19.16■□□□□ 0.66
CLSTN3-204ENST00000535313 XPNPEP3Q9NQH7 507 aa19.16■□□□□ 0.66
CLSTN3-204ENST00000535313 TOMM22Q9NS69 142 aa19.16■□□□□ 0.66
CLSTN3-204ENST00000535313 ORC4O43929 436 aa19.15■□□□□ 0.66
CLSTN3-204ENST00000535313 FGAP02671 866 aa19.15■□□□□ 0.66
CLSTN3-204ENST00000535313 AKR1A1P14550 325 aa19.15■□□□□ 0.66
CLSTN3-204ENST00000535313 NMIQ13287 307 aaPredicted RBP19.15■□□□□ 0.66
CLSTN3-204ENST00000535313 LRRC41Q15345 812 aa19.15■□□□□ 0.66
CLSTN3-204ENST00000535313 EXOC6Q8TAG9 804 aa19.15■□□□□ 0.66
CLSTN3-204ENST00000535313 CHMP4CQ96CF2 233 aa19.15■□□□□ 0.66
CLSTN3-204ENST00000535313 IL17RBQ9NRM6 502 aa19.15■□□□□ 0.66
CLSTN3-204ENST00000535313 PRKAG2Q9UGJ0 569 aa19.15■□□□□ 0.66
CLSTN3-204ENST00000535313 LAMA3Q16787 3333 aa19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 PLXNA1Q9UIW2 1896 aa19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 DNAJC25-GNG10A0A024R161 153 aa19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 NMT2O60551 498 aa19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 IGHDP01880 384 aa19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 ZNF865P0CJ78 1059 aaPredicted RBP19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 HSPD1P10809 573 aaKnown RBP19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 TAL1P17542 331 aaPredicted RBP19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 MFAP1P55081 439 aaKnown RBP19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 RTP1P59025 263 aa19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 NUCB1Q02818 461 aa19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 RRP12Q5JTH9 1297 aaKnown RBP19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 SLC39A5Q6ZMH5 540 aa19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 LBHD1Q9BQE6 289 aaPredicted RBP19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 ATP11BQ9Y2G3 1177 aa19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 SYNGAP1Q96PV0 1343 aa19.14■□□□□ 0.65
CLSTN3-204ENST00000535313 PLA2G6O60733 806 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 FGRP09769 529 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 ADCYAP1R1P41586 468 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 MDM2Q00987 491 aaPredicted RBP19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 RCSD1Q6JBY9 416 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 MAMDC4Q6UXC1 1216 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 KCTD1Q719H9 257 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 ZNF467Q7Z7K2 595 aaPredicted RBP19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 RNF180Q86T96 592 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 ZNF589Q86UQ0 364 aaPredicted RBP19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 TDHQ8IZJ6 230 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 HOMER2Q9NSB8 354 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 MTMR7Q9Y216 660 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 TACC3Q9Y6A5 838 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 CCDC171Q6TFL3 1326 aa19.13■□□□□ 0.65
CLSTN3-204ENST00000535313 SMCHD1A6NHR9 2005 aa19.12■□□□□ 0.65
CLSTN3-204ENST00000535313 ZMYM6O95789 1325 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms