RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ATN1P54259 1190 aaPredicted RBP10.58□□□□□ -0.72
COPB1-211ENST00000534234 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 VPS53Q5VIR6 699 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 SLFN13Q68D06 897 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 B4GALNT3Q6L9W6 998 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 LRRC47Q8N1G4 583 aaKnown RBP10.58□□□□□ -0.72
COPB1-211ENST00000534234 GMCL1P1Q8NEA9 526 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 DDX11Q96FC9 970 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 LNPKQ9C0E8 428 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 NRBP1Q9UHY1 535 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 FEM1BQ9UK73 627 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 TSPY2A6NKD2 308 aa10.57□□□□□ -0.72
COPB1-211ENST00000534234 TMEM232C9JQI7 657 aa10.57□□□□□ -0.72
COPB1-211ENST00000534234 SMC5Q8IY18 1101 aa10.57□□□□□ -0.72
COPB1-211ENST00000534234 CHMP4CQ96CF2 233 aa10.57□□□□□ -0.72
COPB1-211ENST00000534234 SLC38A10Q9HBR0 1119 aa10.57□□□□□ -0.72
COPB1-211ENST00000534234 RAVER2Q9HCJ3 691 aaKnown RBP10.57□□□□□ -0.72
COPB1-211ENST00000534234 ISY1Q9ULR0 285 aaKnown RBP10.57□□□□□ -0.72
COPB1-211ENST00000534234 STX8Q9UNK0 236 aa10.57□□□□□ -0.72
COPB1-211ENST00000534234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.57□□□□□ -0.726e-6■■□□□ 13.9
COPB1-211ENST00000534234 BAZ2AQ9UIF9 1905 aaKnown RBP10.57□□□□□ -0.72
COPB1-211ENST00000534234 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 KBTBD13C9JR72 458 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 RANBP6O60518 1105 aaKnown RBP10.56□□□□□ -0.72
COPB1-211ENST00000534234 FGAP02671 866 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 FDX1P10109 184 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 TAL1P17542 331 aaPredicted RBP10.56□□□□□ -0.72
COPB1-211ENST00000534234 MCCP23508 829 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 ALX1Q15699 326 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 MCMDC2Q4G0Z9 681 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 PPP4R3BQ5MIZ7 849 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 TICAM2Q86XR7 235 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 CHURC1Q8WUH1 139 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 IL17RBQ9NRM6 502 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 CNPY2Q9Y2B0 182 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 PLIN4Q96Q06 1357 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 A0A0D9SFI3 127 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 SOX1O00570 391 aaPredicted RBP10.56□□□□□ -0.72
COPB1-211ENST00000534234 NMT2O60551 498 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 IGHDP01880 384 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 ZNF865P0CJ78 1059 aaPredicted RBP10.56□□□□□ -0.72
COPB1-211ENST00000534234 RARBP10826 455 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 ADCYAP1R1P41586 468 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 SLC1A4P43007 532 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 STAT2P52630 851 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 OAZ1P54368 228 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 LRRC41Q15345 812 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 SLC39A5Q6ZMH5 540 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 ANKRD35Q8N283 1001 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 EXOC6Q8TAG9 804 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 STAG1Q8WVM7 1258 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 RILPL2Q969X0 211 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 UBE2OQ9C0C9 1292 aaKnown RBP10.56□□□□□ -0.72
COPB1-211ENST00000534234 TOMM22Q9NS69 142 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 FBXO40Q9UH90 709 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 TACC3Q9Y6A5 838 aa10.56□□□□□ -0.72
COPB1-211ENST00000534234 TRIOBPQ9H2D6 2365 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 DNAJC25-GNG10A0A024R161 153 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 ORC4O43929 436 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 SNAI1O95863 264 aaPredicted RBP10.55□□□□□ -0.72
COPB1-211ENST00000534234 FGRP09769 529 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 HSPD1P10809 573 aaKnown RBP10.55□□□□□ -0.72
COPB1-211ENST00000534234 RTP1P59025 263 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 MDM2Q00987 491 aaPredicted RBP10.55□□□□□ -0.72
COPB1-211ENST00000534234 IKQ13123 557 aaPredicted RBP10.55□□□□□ -0.72
COPB1-211ENST00000534234 NMIQ13287 307 aaPredicted RBP10.55□□□□□ -0.72
COPB1-211ENST00000534234 RCSD1Q6JBY9 416 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 MAMDC4Q6UXC1 1216 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 KCTD1Q719H9 257 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 FAM160B2Q86V87 743 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 CHD1LQ86WJ1 897 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 TDHQ8IZJ6 230 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 MSL3Q8N5Y2 521 aaKnown RBP10.55□□□□□ -0.72
COPB1-211ENST00000534234 CHST13Q8NET6 341 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 FERMT2Q96AC1 680 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 LRCH3Q96II8 777 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 GMCL1Q96IK5 515 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 XPNPEP3Q9NQH7 507 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 PRKAG2Q9UGJ0 569 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 ATP11BQ9Y2G3 1177 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 RLFQ13129 1914 aa10.55□□□□□ -0.72
COPB1-211ENST00000534234 PGK1P00558 417 aa10.54□□□□□ -0.72
COPB1-211ENST00000534234 AKR1A1P14550 325 aa10.54□□□□□ -0.72
COPB1-211ENST00000534234 NUCB1Q02818 461 aa10.54□□□□□ -0.72
COPB1-211ENST00000534234 RRP12Q5JTH9 1297 aaKnown RBP10.54□□□□□ -0.72
COPB1-211ENST00000534234 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.54□□□□□ -0.72
COPB1-211ENST00000534234 RNF180Q86T96 592 aa10.54□□□□□ -0.72
COPB1-211ENST00000534234 ZNF589Q86UQ0 364 aaPredicted RBP10.54□□□□□ -0.72
COPB1-211ENST00000534234 PLEKHM2Q8IWE5 1019 aa10.54□□□□□ -0.72
COPB1-211ENST00000534234 LBHD1Q9BQE6 289 aaPredicted RBP10.54□□□□□ -0.72
COPB1-211ENST00000534234 HOMER2Q9NSB8 354 aa10.54□□□□□ -0.72
COPB1-211ENST00000534234 MTMR7Q9Y216 660 aa10.54□□□□□ -0.72
COPB1-211ENST00000534234 RANBP2P49792 3224 aaKnown RBP10.54□□□□□ -0.72
COPB1-211ENST00000534234 A0A0G2JMZ2 1700 aa10.54□□□□□ -0.72
COPB1-211ENST00000534234 PLA2G6O60733 806 aa10.53□□□□□ -0.72
COPB1-211ENST00000534234 SDSP20132 328 aa10.53□□□□□ -0.72
COPB1-211ENST00000534234 ZNF467Q7Z7K2 595 aaPredicted RBP10.53□□□□□ -0.72
COPB1-211ENST00000534234 AGBL1Q96MI9 1066 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms