RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 HOXA2O43364 376 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 RTP1P59025 263 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 ATP8B2P98198 1209 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 GABPAQ06546 454 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 SNX17Q15036 470 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 RAB3GAP1Q15042 981 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 KIAA1755Q5JYT7 1200 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 CCDC158Q5M9N0 1113 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 C9orf50Q5SZB4 431 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 TMCO4Q5TGY1 634 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 FAM109BQ6ICB4 259 aaPredicted RBP7.32□□□□□ -1.24
NUP98-215ENST00000529063 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.32□□□□□ -1.24
NUP98-215ENST00000529063 LPAR1Q92633 364 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 FRAT1Q92837 279 aaPredicted RBP7.32□□□□□ -1.24
NUP98-215ENST00000529063 PBXIP1Q96AQ6 731 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 FAM161BQ96MY7 647 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 FEZ1Q99689 392 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 TRIM34Q9BYJ4 488 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 CCDC8Q9H0W5 538 aaPredicted RBP7.32□□□□□ -1.24
NUP98-215ENST00000529063 GZF1Q9H116 711 aaPredicted RBP7.32□□□□□ -1.24
NUP98-215ENST00000529063 RPAP3Q9H6T3 665 aaPredicted RBP7.32□□□□□ -1.24
NUP98-215ENST00000529063 SERPINB13Q9UIV8 391 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 NOP58Q9Y2X3 529 aaKnown RBP7.32□□□□□ -1.24
NUP98-215ENST00000529063 MYH7P12883 1935 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 SMCHD1A6NHR9 2005 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 IGSF3O75054 1194 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 COBLO75128 1261 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 SURF6O75683 361 aaKnown RBP7.31□□□□□ -1.24
NUP98-215ENST00000529063 IDH1O75874 414 aaKnown RBP7.31□□□□□ -1.24
NUP98-215ENST00000529063 RLBP1P12271 317 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 RFX1P22670 979 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 ADORA2AP29274 412 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 GCGRP47871 477 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 USP14P54578 494 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 CCNA1P78396 465 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 SEPT2Q15019 361 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 ABCB5Q2M3G0 1257 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 CERKLQ49MI3 558 aaPredicted RBP7.31□□□□□ -1.24
NUP98-215ENST00000529063 GJC2Q5T442 439 aaPredicted RBP7.31□□□□□ -1.24
NUP98-215ENST00000529063 WDR78Q5VTH9 848 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 MFSD14CQ5VZR4 134 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 ANO1Q5XXA6 986 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 CLEC10AQ8IUN9 316 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 CCAR1Q8IX12 1150 aaKnown RBP7.31□□□□□ -1.24
NUP98-215ENST00000529063 MAGEB6Q8N7X4 407 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 MOV10L1Q9BXT6 1211 aaKnown RBP7.31□□□□□ -1.24
NUP98-215ENST00000529063 PDLIM7Q9NR12 457 aa7.31□□□□□ -1.24
NUP98-215ENST00000529063 SMIM22K7EJ46 135 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 IPO8O15397 1037 aaKnown RBP7.3□□□□□ -1.24
NUP98-215ENST00000529063 MSCO60682 206 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 GLRX3O76003 335 aaKnown RBP7.3□□□□□ -1.24
NUP98-215ENST00000529063 CYP2D6P10635 497 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 CNGA1P29973 690 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 USP5P45974 858 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 ATP2B2Q01814 1243 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 CTDSPL2Q05D32 466 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 OS9Q13438 667 aaPredicted RBP7.3□□□□□ -1.24
NUP98-215ENST00000529063 SHHQ15465 462 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 PROX2Q3B8N5 592 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 TRIM60Q495X7 471 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 FAM47AQ5JRC9 791 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 OLFML2BQ68BL8 750 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 SLC39A5Q6ZMH5 540 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 SH3RF1Q7Z6J0 888 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 SIAH1Q8IUQ4 282 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 SLC44A5Q8NCS7 719 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 TSC1Q92574 1164 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 TTYH1Q9H313 450 aaPredicted RBP7.3□□□□□ -1.24
NUP98-215ENST00000529063 CWC22Q9HCG8 908 aaKnown RBP7.3□□□□□ -1.24
NUP98-215ENST00000529063 ATP11BQ9Y2G3 1177 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 CHD9Q3L8U1 2897 aa7.3□□□□□ -1.24
NUP98-215ENST00000529063 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.29□□□□□ -1.24
NUP98-215ENST00000529063 TCRBV5S4A2TA0A5A2 114 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 TRIM43BA6NCK2 446 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 SEPT4O43236 478 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 ERCC3P19447 782 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 ITGB8P26012 769 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 EPHB4P54760 987 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 GUCA2AQ02747 115 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 LRRC41Q15345 812 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 PRAMEF19Q5SWL8 479 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 ZKSCAN2Q63HK3 967 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 CEP85Q6P2H3 762 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 TTC6Q86TZ1 520 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 CERS3Q8IU89 383 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 LCORLQ8N3X6 602 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 SHCBP1Q8NEM2 672 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 ADAMTS19Q8TE59 1207 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 BADQ92934 168 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 TRIM43Q96BQ3 446 aaPredicted RBP7.29□□□□□ -1.24
NUP98-215ENST00000529063 ATG4CQ96DT6 458 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 CDX2Q99626 313 aaPredicted RBP7.29□□□□□ -1.24
NUP98-215ENST00000529063 LBHD1Q9BQE6 289 aaPredicted RBP7.29□□□□□ -1.24
NUP98-215ENST00000529063 SPATC1LQ9H0A9 340 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 PCDHGC3Q9UN70 934 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 IVNS1ABPQ9Y6Y0 642 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 ROBO3Q96MS0 1386 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 LRRC37A2A6NM11 1700 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 REV3LO60673 3130 aa7.29□□□□□ -1.24
NUP98-215ENST00000529063 MCM3APO60318 1980 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms