RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 CPXCR1Q8N123 301 aa22.38■■□□□ 1.17
PTP4A3-206ENST00000524028 FERMT2Q96AC1 680 aa22.38■■□□□ 1.17
PTP4A3-206ENST00000524028 KIFC2Q96AC6 838 aa22.38■■□□□ 1.17
PTP4A3-206ENST00000524028 NAPBQ9H115 298 aa22.38■■□□□ 1.17
PTP4A3-206ENST00000524028 TSPY3P0CV98 308 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 TSPY8P0CW00 308 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 SLC4A3P48751 1232 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 TFAP4Q01664 338 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 SNX17Q15036 470 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 TRIM60Q495X7 471 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 Q7L0L9 218 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 GMCL1P1Q8NEA9 526 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 SLC38A10Q9HBR0 1119 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 RAVER2Q9HCJ3 691 aaKnown RBP22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 XPNPEP3Q9NQH7 507 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 INCENPQ9NQS7 918 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 SYNPO2Q9UMS6 1093 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 PLIN4Q96Q06 1357 aa22.37■■□□□ 1.17
PTP4A3-206ENST00000524028 ZNFX1Q9P2E3 1918 aaKnown RBP22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 DNAJC25-GNG10A0A024R161 153 aa22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 ZBED4O75132 1171 aa22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 PGK1P00558 417 aa22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 RARBP10826 455 aa22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 PDE4BQ07343 736 aa22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 ANKRD45Q5TZF3 282 aa22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 LENG1Q96BZ8 264 aaPredicted RBP22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 LBHD1Q9BQE6 289 aaPredicted RBP22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 FEM1BQ9UK73 627 aa22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 TACC3Q9Y6A5 838 aa22.36■■□□□ 1.17
PTP4A3-206ENST00000524028 SNAI1O95863 264 aaPredicted RBP22.35■■□□□ 1.17
PTP4A3-206ENST00000524028 SLFN13Q68D06 897 aa22.35■■□□□ 1.17
PTP4A3-206ENST00000524028 DEFB123Q8N688 67 aa22.35■■□□□ 1.17
PTP4A3-206ENST00000524028 DDX11Q96FC9 970 aa22.35■■□□□ 1.17
PTP4A3-206ENST00000524028 PHF24Q9UPV7 400 aa22.35■■□□□ 1.17
PTP4A3-206ENST00000524028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.35■■□□□ 1.172e-6■■■■□ 25.7
PTP4A3-206ENST00000524028 CTDSPL2Q05D32 466 aa22.34■■□□□ 1.17
PTP4A3-206ENST00000524028 VPS53Q5VIR6 699 aa22.34■■□□□ 1.17
PTP4A3-206ENST00000524028 PRKAG2Q9UGJ0 569 aa22.34■■□□□ 1.17
PTP4A3-206ENST00000524028 SLC3A2P08195 630 aaKnown RBP22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 BMP3P12645 472 aa22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 AKR1A1P14550 325 aa22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 C1orf53Q5VUE5 145 aa22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 MAMDC4Q6UXC1 1216 aa22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.33■■□□□ 1.172e-8■□□□□ 10.8
PTP4A3-206ENST00000524028 SH3RF1Q7Z6J0 888 aa22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 MSL3Q8N5Y2 521 aaKnown RBP22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 CHMP4CQ96CF2 233 aa22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 FGD4Q96M96 766 aa22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 CNPY2Q9Y2B0 182 aa22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 CTDP1Q9Y5B0 961 aaPredicted RBP22.33■■□□□ 1.17
PTP4A3-206ENST00000524028 SYNGAP1Q96PV0 1343 aa22.32■■□□□ 1.16
PTP4A3-206ENST00000524028 TRIM43BA6NCK2 446 aa22.32■■□□□ 1.16
PTP4A3-206ENST00000524028 TMEM232C9JQI7 657 aa22.32■■□□□ 1.16
PTP4A3-206ENST00000524028 ADAMTS4O75173 837 aa22.32■■□□□ 1.16
PTP4A3-206ENST00000524028 RNF180Q86T96 592 aa22.32■■□□□ 1.16
PTP4A3-206ENST00000524028 TRIM43Q96BQ3 446 aaPredicted RBP22.32■■□□□ 1.16
PTP4A3-206ENST00000524028 PRDM5Q9NQX1 630 aaPredicted RBP22.32■■□□□ 1.16
PTP4A3-206ENST00000524028 PDLIM7Q9NR12 457 aa22.32■■□□□ 1.16
PTP4A3-206ENST00000524028 IL17RBQ9NRM6 502 aa22.32■■□□□ 1.16
PTP4A3-206ENST00000524028 NMT2O60551 498 aa22.31■■□□□ 1.16
PTP4A3-206ENST00000524028 OAZ1P54368 228 aa22.31■■□□□ 1.16
PTP4A3-206ENST00000524028 PDE1AP54750 535 aa22.31■■□□□ 1.16
PTP4A3-206ENST00000524028 HDAC1Q13547 482 aaPredicted RBP22.31■■□□□ 1.16
PTP4A3-206ENST00000524028 ZNF467Q7Z7K2 595 aaPredicted RBP22.31■■□□□ 1.16
PTP4A3-206ENST00000524028 EVI5LQ96CN4 794 aa22.31■■□□□ 1.16
PTP4A3-206ENST00000524028 GMCL1Q96IK5 515 aa22.31■■□□□ 1.16
PTP4A3-206ENST00000524028 SMCHD1A6NHR9 2005 aa22.31■■□□□ 1.16
PTP4A3-206ENST00000524028 MYH4Q9Y623 1939 aa22.31■■□□□ 1.16
PTP4A3-206ENST00000524028 PLXNA1Q9UIW2 1896 aa22.3■■□□□ 1.16
PTP4A3-206ENST00000524028 MCCP23508 829 aa22.3■■□□□ 1.16
PTP4A3-206ENST00000524028 TLE2Q04725 743 aa22.3■■□□□ 1.16
PTP4A3-206ENST00000524028 ANKRD35Q8N283 1001 aa22.3■■□□□ 1.16
PTP4A3-206ENST00000524028 CHST13Q8NET6 341 aa22.3■■□□□ 1.16
PTP4A3-206ENST00000524028 BADQ92934 168 aa22.3■■□□□ 1.16
PTP4A3-206ENST00000524028 MTMR10Q9NXD2 777 aa22.3■■□□□ 1.16
PTP4A3-206ENST00000524028 FAM184BQ9ULE4 1060 aa22.3■■□□□ 1.16
PTP4A3-206ENST00000524028 ZNF536O15090 1300 aa22.3■■□□□ 1.16
PTP4A3-206ENST00000524028 SYNRGQ9UMZ2 1314 aa22.3■■□□□ 1.16
PTP4A3-206ENST00000524028 A0A1W2PQ45 241 aaPredicted RBP22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 A0A1W2PQY0 241 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 ITGB8P26012 769 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 SLC1A4P43007 532 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 STAT2P52630 851 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 RASGRP2Q7LDG7 609 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 STAG1Q8WVM7 1258 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 FAM227BQ96M60 508 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 AGBL1Q96MI9 1066 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 HOMER2Q9NSB8 354 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 ZBTB47Q9UFB7 747 aaPredicted RBP22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 FBXO40Q9UH90 709 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 ANAPC4Q9UJX5 808 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 ZHX1Q9UKY1 873 aaPredicted RBP22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 ISY1Q9ULR0 285 aaKnown RBP22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 STX8Q9UNK0 236 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 LTBP2Q14767 1821 aa22.29■■□□□ 1.16
PTP4A3-206ENST00000524028 COL6A3P12111 3177 aa22.28■■□□□ 1.16
PTP4A3-206ENST00000524028 TSPY2A6NKD2 308 aa22.28■■□□□ 1.16
PTP4A3-206ENST00000524028 ADCY6O43306 1168 aa22.28■■□□□ 1.16
PTP4A3-206ENST00000524028 IRX5P78411 483 aaPredicted RBP22.28■■□□□ 1.16
PTP4A3-206ENST00000524028 ACVR2BQ13705 512 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms