RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 COBLO75128 1261 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 HLA-DOAP06340 250 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 CYBAP13498 195 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 ANO1Q5XXA6 986 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 LBX2Q6XYB7 198 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 ITPRIPQ8IWB1 547 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 LCORLQ8N3X6 602 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 SDR42E1Q8WUS8 393 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 DYNLL2Q96FJ2 89 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 GUCD1Q96NT3 240 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 GINM1Q9NU53 330 aa13.49□□□□□ -0.25
CSMD1-210ENST00000521646 BAZ2AQ9UIF9 1905 aaKnown RBP13.49□□□□□ -0.25
CSMD1-210ENST00000521646 CYP2D7A0A087X1C5 515 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 PRKAB2O43741 272 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 HOXC6P09630 235 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 PDE6AP16499 860 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 CAPN2P17655 700 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 USP5P45974 858 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 ABCB5Q2M3G0 1257 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
CSMD1-210ENST00000521646 AACSQ86V21 672 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 KRI1Q8N9T8 703 aaKnown RBP13.48□□□□□ -0.25
CSMD1-210ENST00000521646 FEZ1Q99689 392 aa13.48□□□□□ -0.25
CSMD1-210ENST00000521646 MOV10L1Q9BXT6 1211 aaKnown RBP13.48□□□□□ -0.25
CSMD1-210ENST00000521646 UBE2OQ9C0C9 1292 aaKnown RBP13.48□□□□□ -0.25
CSMD1-210ENST00000521646 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.48□□□□□ -0.25
CSMD1-210ENST00000521646 SLC15A5A6NIM6 579 aa13.47□□□□□ -0.25
CSMD1-210ENST00000521646 GGCXP38435 758 aa13.47□□□□□ -0.25
CSMD1-210ENST00000521646 PDE3AQ14432 1141 aa13.47□□□□□ -0.25
CSMD1-210ENST00000521646 PRAMEF19Q5SWL8 479 aa13.47□□□□□ -0.25
CSMD1-210ENST00000521646 TRIM34Q9BYJ4 488 aa13.47□□□□□ -0.25
CSMD1-210ENST00000521646 SENP6Q9GZR1 1112 aaPredicted RBP13.47□□□□□ -0.25
CSMD1-210ENST00000521646 DDX20Q9UHI6 824 aaKnown RBP13.47□□□□□ -0.25
CSMD1-210ENST00000521646 COL11A1P12107 1806 aaPredicted RBP13.47□□□□□ -0.25
CSMD1-210ENST00000521646 ZNF532Q9HCE3 1301 aa13.46□□□□□ -0.25
CSMD1-210ENST00000521646 ITGB8P26012 769 aa13.46□□□□□ -0.25
CSMD1-210ENST00000521646 GJC2Q5T442 439 aaPredicted RBP13.46□□□□□ -0.25
CSMD1-210ENST00000521646 WDR78Q5VTH9 848 aa13.46□□□□□ -0.25
CSMD1-210ENST00000521646 SH3RF1Q7Z6J0 888 aa13.46□□□□□ -0.25
CSMD1-210ENST00000521646 DCP1AQ9NPI6 582 aaPredicted RBP13.46□□□□□ -0.25
CSMD1-210ENST00000521646 CHD9Q3L8U1 2897 aa13.46□□□□□ -0.25
CSMD1-210ENST00000521646 NR1I2O75469 434 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 AKR1B1P15121 316 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 ADORA2AP29274 412 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 PUS10Q3MIT2 529 aaKnown RBP13.45□□□□□ -0.26
CSMD1-210ENST00000521646 C9orf50Q5SZB4 431 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 SPICE1Q8N0Z3 855 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 RHPN1Q8TCX5 695 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 GTF3C2Q8WUA4 911 aaPredicted RBP13.45□□□□□ -0.26
CSMD1-210ENST00000521646 ATG4CQ96DT6 458 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 FAM161BQ96MY7 647 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 ARMT1Q9H993 441 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 STXBP5LQ9Y2K9 1186 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 SMCHD1A6NHR9 2005 aa13.45□□□□□ -0.26
CSMD1-210ENST00000521646 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
CSMD1-210ENST00000521646 APBB1O00213 710 aa13.44□□□□□ -0.26
CSMD1-210ENST00000521646 ERCC3P19447 782 aa13.44□□□□□ -0.26
CSMD1-210ENST00000521646 RTP1P59025 263 aa13.44□□□□□ -0.26
CSMD1-210ENST00000521646 SLC9C2Q5TAH2 1124 aa13.44□□□□□ -0.26
CSMD1-210ENST00000521646 TRMT44Q8IYL2 757 aaKnown RBP13.44□□□□□ -0.26
CSMD1-210ENST00000521646 LPAR1Q92633 364 aa13.44□□□□□ -0.26
CSMD1-210ENST00000521646 LENG1Q96BZ8 264 aaPredicted RBP13.44□□□□□ -0.26
CSMD1-210ENST00000521646 MCM9Q9NXL9 1143 aa13.44□□□□□ -0.26
CSMD1-210ENST00000521646 ZNFX1Q9P2E3 1918 aaKnown RBP13.44□□□□□ -0.26
CSMD1-210ENST00000521646 REV3LO60673 3130 aa13.44□□□□□ -0.26
CSMD1-210ENST00000521646 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
CSMD1-210ENST00000521646 TRIM43BA6NCK2 446 aa13.43□□□□□ -0.26
CSMD1-210ENST00000521646 GOLIM4O00461 696 aa13.43□□□□□ -0.26
CSMD1-210ENST00000521646 TAL1P17542 331 aaPredicted RBP13.43□□□□□ -0.26
CSMD1-210ENST00000521646 CNGA1P29973 690 aa13.43□□□□□ -0.26
CSMD1-210ENST00000521646 USP14P54578 494 aa13.43□□□□□ -0.26
CSMD1-210ENST00000521646 MAP3K12Q12852 859 aa13.43□□□□□ -0.26
CSMD1-210ENST00000521646 TTC6Q86TZ1 520 aa13.43□□□□□ -0.26
CSMD1-210ENST00000521646 TRIM43Q96BQ3 446 aaPredicted RBP13.43□□□□□ -0.26
CSMD1-210ENST00000521646 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.43□□□□□ -0.26
CSMD1-210ENST00000521646 SPATC1LQ9H0A9 340 aa13.43□□□□□ -0.26
CSMD1-210ENST00000521646 FBXO28Q9NVF7 368 aa13.43□□□□□ -0.26
CSMD1-210ENST00000521646 MYH8P13535 1937 aa13.43□□□□□ -0.26
CSMD1-210ENST00000521646 DNM1LO00429 736 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 IGSF3O75054 1194 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 POLR3DP05423 398 aaPredicted RBP13.42□□□□□ -0.26
CSMD1-210ENST00000521646 EPHB4P54760 987 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 HNRNPUQ00839 825 aaKnown RBP eCLIP13.42□□□□□ -0.26
CSMD1-210ENST00000521646 ATP2B2Q01814 1243 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 TMEM132BQ14DG7 1078 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 SNX17Q15036 470 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 SHHQ15465 462 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 TRIM60Q495X7 471 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 FAM47AQ5JRC9 791 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 MFSD14CQ5VZR4 134 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 CCAR1Q8IX12 1150 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms